SUPERFAMILY 1.75 HMM library and genome assignments server

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mu transposase, C-terminal domain family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   524 524
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli BW2952   1 1
No Yes NCBI 2017_08 genome   406 406
No Yes STRING v9.0.5 (STRING)   6 6
No Yes Uniprot 2018_03 genome   72 72
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   5 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   13 13
No Yes UniProt viral sequences (Viral)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]