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Galactose oxidase, central domain family domain assignments
in
all bacterial genomes

Assignment details

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25 selected genomes have 39 significant domains in 39 proteins.

Showing genomes 1 to 25 of 25
  1  

Nostoc punctiforme PCC 73102 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|186683014|ref|YP_001866210.1|   7.06e-42   0.0000822   71-395   1k3i A:151-537  
 
Weak hits:
gi|186681163|ref|YP_001864359.1|   0.0602   0.037   84-217   1k3i A:151-537  
gi|186686820|ref|YP_001870013.1|   7.19e-19   0.034   673-833   1k3i A:151-537  

Actinoplanes sp. SE50/110 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386847948|ref|YP_006265961.1|   7.72e-46   0.0000000195   507-861   1k3i A:151-537  
 
Weak hits:
gi|386848200|ref|YP_006266213.1|   2.35e-34   0.0014   74-138,262-551   1k3i A:151-537  
gi|386849096|ref|YP_006267109.1|   5.62e-27   0.00084   271-608   1k3i A:151-537  
gi|386850515|ref|YP_006268528.1|   3.4e-31   0.0015   76-140,258-550   1k3i A:151-537  
gi|386852533|ref|YP_006270546.1|   1.7e-27   0.00042   113-455   1k3i A:151-537  
gi|386852986|ref|YP_006270999.1|   0.017   0.041   155-189,234-270   1k3i A:151-537  

Sorangium cellulosum 'So ce 56' has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|162453147|ref|YP_001615514.1|   9.55e-36   0.0000949   424-754   1k3i A:151-537  
 
Weak hits:
gi|162451837|ref|YP_001614204.1|   2.22e-22   0.0079   359-506,589-654   1k3i A:151-537  
gi|162451933|ref|YP_001614300.1|   0.000000103   0.018   265-452   1k3i A:151-537  
gi|162452930|ref|YP_001615297.1|   0.00000248   0.035   134-307   1k3i A:151-537  
gi|162454320|ref|YP_001616687.1|   0.000000000418   0.022   453-548   1k3i A:151-537  
gi|162454321|ref|YP_001616688.1|   6.54e-37   0.0025   211-431   1k3i A:151-537  
gi|162454650|ref|YP_001617017.1|   2.48e-43   0.0026   140-423   1k3i A:151-537  
gi|162454655|ref|YP_001617022.1|   1.2e-43   0.0025   136-419   1k3i A:151-537  
gi|162454973|ref|YP_001617340.1|   2.48e-51   0.00082   237-495   1k3i A:151-537  
gi|162455131|ref|YP_001617498.1|   1.37e-56   0.00035   405-688   1k3i A:151-537  
  1.44e-46   0.0026   220-446   1k3i A:151-537  
gi|162455136|ref|YP_001617503.1|   1.15e-46   0.00092   435-700   1k3i A:151-537  
gi|162456567|ref|YP_001618934.1|   0.00418   0.025   84-243   1k3i A:151-537  
gi|162456920|ref|YP_001619287.1|   0.00000000628   0.026   281-572   1k3i A:151-537  
gi|162456931|ref|YP_001619298.1|   1.57e-53   0.0015   69-332   1k3i A:151-537  
  7.19e-43   0.0048   504-750   1k3i A:151-537  
gi|162457545|ref|YP_001619912.1|   0.0248   0.045   113-145   1k3i A:151-537  

Stigmatella aurantiaca DW4/3-1 has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|310821267|ref|YP_003953625.1|   5.49e-43   0.0000865   67-366   1k3i A:151-537  
gi|310822140|ref|YP_003954498.1|   2.22e-44   0.0000602   50-370   1k3i A:151-537  
gi|310823733|ref|YP_003956091.1|   3.53e-39   0.00000457   92-423   1k3i A:151-537  
 
Weak hits:
gi|310819039|ref|YP_003951397.1|   9.81e-51   0.0027   439-649   1k3i A:151-537  
gi|310820934|ref|YP_003953292.1|   4.84e-54   0.00082   129-388   1k3i A:151-537  
gi|310823959|ref|YP_003956317.1|   1.57e-39   0.0079   54-352   1k3i A:151-537  
gi|310824995|ref|YP_003957353.1|   0.00222   0.047   386-542   1k3i A:151-537  
gi|310825395|ref|YP_003957753.1|   0.00000209   0.034   237-371   1k3i A:151-537  

Burkholderia sp. RPE64 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|507517952|ref|YP_008039568.1|   9.15e-47   0.000000332   204-552   1k3i A:151-537  

Burkholderia sp. CCGE1002 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|295681363|ref|YP_003609937.1|   2.48e-46   0.000000305   202-550   1k3i A:151-537  

Burkholderia thailandensis E264 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|83717900|ref|YP_438927.1|   7.32e-40   0.000000252   346-704   1k3i A:151-537  

Burkholderia pseudomallei 1106a has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|126453490|ref|YP_001065868.1|   1.15e-38   0.0000025   423-751   1k3i A:151-537  
gi|126456133|ref|YP_001076266.1|   2.22e-40   0.000000331   346-704   1k3i A:151-537  
 
Weak hits:
gi|126452313|ref|YP_001064662.1|   6.15e-44   0.00042   451-796   1k3i A:151-537  

Burkholderia mallei SAVP1 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|121596901|ref|YP_991307.1|   1.83e-40   0.000000331   346-704   1k3i A:151-537  
gi|121601594|ref|YP_992700.1|   4.32e-39   0.00000264   424-751   1k3i A:151-537  

Variovorax paradoxus S110 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|239815310|ref|YP_002944220.1|   1.18e-42   0.000000368   176-535   1k3i A:151-537  

Methylobacterium chloromethanicum CM4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|218528116|ref|YP_002418932.1|   2.35e-42   0.00000178   546-897   1k3i A:151-537  
 
Weak hits:
gi|218529363|ref|YP_002420179.1|   1.1e-25   0.00067   92-439   1k3i A:151-537  

Methylobacterium extorquens AM1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|240136820|ref|YP_002961287.1|   3.01e-42   0.00000178   838-1189   1k3i A:151-537  
 
Weak hits:
gi|240137692|ref|YP_002962163.1|   7.98e-26   0.00064   74-420   1k3i A:151-537  

Methylobacterium sp. 4-46 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|170739690|ref|YP_001768345.1|   4.05e-42   0.00000039   648-998   1k3i A:151-537  
 
Weak hits:
gi|170738826|ref|YP_001767481.1|   7.98e-18   0.0015   217-447   1k3i A:151-537  
  0.00000772   0.01   57-258   1k3i A:151-537  

Burkholderia sp. YI23 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|377810683|ref|YP_005043123.1|   6.67e-40   0.000000436   231-552   1k3i A:151-537  

Burkholderia pseudomallei MSHR305 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|526459075|ref|YP_008328778.1|   1.83e-40   0.000000331   346-704   1k3i A:151-537  
gi|526469984|ref|YP_008340766.1|   4.05e-39   0.00000246   365-693   1k3i A:151-537  
 
Weak hits:
gi|526471020|ref|YP_008341793.1|   7.32e-44   0.00042   413-758   1k3i A:151-537  

Burkholderia pseudomallei NCTC 13179 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|556572660|ref|YP_008740761.1|   2.62e-40   0.000000331   346-704   1k3i A:151-537  
gi|556575310|ref|YP_008742710.1|   4.05e-39   0.00000246   365-693   1k3i A:151-537  
 
Weak hits:
gi|556575886|ref|YP_008743714.1|   4.84e-44   0.00042   413-759   1k3i A:151-537  

Burkholderia pseudomallei BPC006 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|403518297|ref|YP_006652430.1|   1.15e-38   0.0000025   423-751   1k3i A:151-537  
gi|403523492|ref|YP_006659061.1|   2.22e-40   0.000000331   346-704   1k3i A:151-537  
 
Weak hits:
gi|403517031|ref|YP_006651164.1|   6.15e-44   0.00042   451-796   1k3i A:151-537  

Burkholderia pseudomallei 1026b has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386862103|ref|YP_006275052.1|   7.32e-39   0.0000025   370-698   1k3i A:151-537  
gi|386865446|ref|YP_006278394.1|   3.53e-40   0.000000331   346-704   1k3i A:151-537  
 
Weak hits:
gi|386861735|ref|YP_006274684.1|   3.4e-22   0.00066   98-443   1k3i A:151-537  
gi|386863193|ref|YP_006276142.1|   4.84e-44   0.00041   408-758   1k3i A:151-537  

Burkholderia pseudomallei MSHR346 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|237811872|ref|YP_002896323.1|   3.66e-39   0.0000025   423-751   1k3i A:151-537  
 
Weak hits:
gi|237810562|ref|YP_002895013.1|   6.15e-44   0.00042   451-796   1k3i A:151-537  
gi|237812310|ref|YP_002896761.1|   1.31e-22   0.00066   31-397   1k3i A:151-537  

Burkholderia pseudomallei 668 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|126439628|ref|YP_001058613.1|   1.7e-38   0.00000236   420-751   1k3i A:151-537  
gi|126443241|ref|YP_001063311.1|   3.79e-40   0.000000335   346-704   1k3i A:151-537  

Burkholderia pseudomallei 1710b has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|76810477|ref|YP_333159.1|   1.05e-38   0.00000264   373-700   1k3i A:151-537  
gi|76819472|ref|YP_335871.1|   2.22e-40   0.000000331   346-704   1k3i A:151-537  
 
Weak hits:
gi|76809253|ref|YP_331970.1|   4.32e-44   0.00042   413-759   1k3i A:151-537  
gi|76809660|ref|YP_333561.1|   3.27e-22   0.00066   65-431   1k3i A:151-537  

Burkholderia pseudomallei K96243 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|53719669|ref|YP_108655.1|   8.11e-39   0.0000025   420-748   1k3i A:151-537  
gi|53722670|ref|YP_111655.1|   2.22e-40   0.000000331   346-704   1k3i A:151-537  
 
Weak hits:
gi|53717986|ref|YP_106972.1|   4.84e-44   0.00042   413-758   1k3i A:151-537  
gi|53719322|ref|YP_108308.1|   2.88e-22   0.00066   98-443   1k3i A:151-537  

Burkholderia mallei NCTC 10229 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|124382517|ref|YP_001025718.1|   1.83e-40   0.000000331   346-704   1k3i A:151-537  
gi|124384008|ref|YP_001026504.1|   4.71e-39   0.00000264   367-693   1k3i A:151-537  

Burkholderia mallei NCTC 10247 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|126447184|ref|YP_001077797.1|   1.83e-40   0.000000331   346-704   1k3i A:151-537  
gi|126449633|ref|YP_001080217.1|   4.71e-39   0.00000264   367-693   1k3i A:151-537  

Burkholderia mallei ATCC 23344 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|53716377|ref|YP_106234.1|   1.83e-40   0.000000331   346-704   1k3i A:151-537  
gi|53725122|ref|YP_102591.1|   3.53e-39   0.00000264   371-698   1k3i A:151-537  

  1  
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Select to display   Genome       Domains   Proteins
No Yes ALL   2908 2908
No Yes Ustilago maydis   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   3 3
No Yes Podospora anserina   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Glomerella graminicola 22   3 3
No Yes Fusarium graminearum   4 4
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 4
No Yes Fusarium verticillioides 7600   4 4
No Yes Botrytis cinerea B05.10   2 2
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   2 2
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   4 4
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   2 2
No Yes Cochliobolus lunatus m118 v2.0   2 2
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   3 3
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   2 2
No Yes Phaeodactylum tricornutumCCAP 1055/1   2 2
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Stigmatella aurantiaca DW4/3-1   3 3
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   2 2
No Yes Burkholderia mallei SAVP1   2 2
No Yes Variovorax paradoxus S110   1 1
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia pseudomallei MSHR305   2 2
No Yes Burkholderia pseudomallei NCTC 13179   2 2
No Yes Burkholderia pseudomallei BPC006   2 2
No Yes Burkholderia pseudomallei 1026b   2 2
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   2 2
No Yes Burkholderia pseudomallei 1710b   2 2
No Yes Burkholderia pseudomallei K96243   2 2
No Yes Burkholderia mallei NCTC 10229   2 2
No Yes Burkholderia mallei NCTC 10247   2 2
No Yes Burkholderia mallei ATCC 23344   2 2
No Yes Combined (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1879 1879
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   47 47
No Yes Uniprot 2018_03 genome   702 701
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   13 13
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   43 43

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