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Virulence factor P.69 pertactin family domain assignments


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View all assignments containing a Virulence factor P.69 pertactin domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   2301 2301
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Bordetella pertussis Tohama I   3 3
No Yes Bordetella parapertussis 12822   3 3
No Yes Bordetella bronchiseptica RB50   3 3
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Bordetella pertussis CS   3 3
No Yes Bordetella parapertussis 18323   2 2
No Yes Bordetella parapertussis Bpp5   3 3
No Yes Bordetella bronchiseptica MO149   4 4
No Yes Bordetella bronchiseptica 253   2 2
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Combined (meta-genome)   2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1691 1691
No Yes STRING v9.0.5 (STRING)   14 14
No Yes Uniprot 2018_03 genome   534 534
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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