Select to display Genome Domains Proteins No ALL 4085904 4085904 Yes Homo sapiens 76_38 Human 545 465 Yes Pan troglodytes 76_2.1.4 Chimpanzee 168 126 Yes Gorilla gorilla 76_3.1 Western gorilla 213 163 Yes Pongo abelii 76_2 Sumatran orangutan 160 124 Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 171 128 Yes Papio anubis 76 Olive baboon 174 130 Yes Macaca mulatta 76_1 Rhesus monkey 240 191 Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 318 231 Yes Otolemur garnettii 76_3 Small-eared galago 167 125 Yes Microcebus murinus 76_1 Gray mouse lemur 129 91 Yes Rattus norvegicus 76_5.0 Norway rat 196 155 Yes Mus musculus 76_38 House mouse 315 261 Yes Dipodomys ordii 76_1 Ord's kangaroo rat 137 102 Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 167 127 Yes Heterocephalus glaber v1.7-2 Naked mole-rat 162 118 Yes Cavia porcellus 76_3 Domestic guinea pig 158 116 Yes Oryctolagus cuniculus 76_2 Rabbit 167 132 Yes Ochotona princeps 76 American pika 142 113 Yes Tupaia belangeri 76 Northern tree shrew 119 95 Yes Sus scrofa 76_10.2 Pig 174 139 Yes Bos taurus 76_3.1 Cattle 181 140 Yes Ovis aries 76_3.1 Sheep 181 137 Yes Vicugna pacos 76_1 Alpaca 102 80 Yes Tursiops truncatus 76_1 Bottlenose dolphin 153 112 Yes Mustela putorius furo 76_1.0 Domestic ferret 149 113 Yes Ailuropoda melanoleuca 76_1 Giant panda 173 133 Yes Canis familiaris 76_3.1 Dog 211 162 Yes Felis catus 76_6.2 Domestic cat 166 121 Yes Equus caballus 76_2 Horse 170 126 Yes Myotis lucifugus 76_2.0 Little brown bat 164 118 Yes Pteropus vampyrus 76_1 Large flying fox 151 110 Yes Sorex araneus 76_1 European shrew 99 75 Yes Erinaceus europaeus 76 Western European hedgehog 106 85 Yes Procavia capensis 76_1 Cape rock hyrax 137 102 Yes Loxodonta africana 76_3 African savanna elephant 199 145 Yes Echinops telfairi 76 Small Madagascar hedgehog 120 89 Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 190 149 Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 95 75 Yes Macropus eugenii 76_1.0 Tammar wallaby 121 89 Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 177 118 Yes Monodelphis domestica 76_5 Gray short-tailed opossum 165 122 Yes Ornithorhynchus anatinus 76_5 Platypus 124 100 Yes Saccoglossus kowalevskii v3.0 288 233 Yes Petromyzon marinus 76_7.0 Sea lamprey 89 60 Yes Meleagris gallopavo 76_2 Turkey 133 92 Yes Gallus gallus 76_4 Chicken 135 97 Yes Anas platyrhynchos 76_1.0 Mallard 138 99 Yes Taeniopygia guttata 76_3.2.4 Zebra finch 128 96 Yes Ficedula albicollis 76_1.0 Collared flycatcher 138 102 Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 162 121 Yes Anolis carolinensis 76_2.0 Green anole 141 104 Yes Xenopus laevis African clawed frog 396 293 Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 166 123 Yes Latimeria chalumnae 76_1 Coelacanth 165 120 Yes Lepisosteus oculatus 76 Spotted gar 179 121 Yes Gadus morhua 76_1 Atlantic cod 155 114 Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 186 135 Yes Takifugu rubripes 76_4 Torafugu 322 214 Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 238 163 Yes Oryzias latipes 76_1 Japanese medaka 190 141 Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 171 125 Yes Poecilia formosa 76 Amazon molly 184 129 Yes Oreochromis niloticus 76_1.0 Nile tilapia 212 150 Yes Astyanax mexicanus 76 Mexican tetra 172 123 Yes Danio rerio 76_9 Zebrafish 261 209 Yes Oikopleura dioica 142 104 Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 156 105 Yes Ciona intestinalis 76 Vase tunicate 125 97 Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 180 146 Yes Adineta vaga 397 312 Yes Octopus bimaculoides 280 146 120 Yes Crassostrea gigas 22 Pacific oyster 151 117 Yes Lottia gigantea Owl limpet 147 115 Yes Helobdella robusta 109 80 Yes Capitella sp. I 166 131 Yes Danaus plexippus OGS1.0 Monarch butterfly 118 86 Yes Heliconius melpomene Postman butterfly 113 81 Yes Bombyx mori Domestic silkworm 95 72 Yes Nasonia vitripennis Jewel wasp 103 74 Yes Apis mellifera 38.2d (Not maintained) Honey bee 165 130 Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 106 75 Yes Linepithema humile v1.1 Argentine ant 97 70 Yes Pogonomyrmex barbatus v1.2 Red harvester ant 102 72 Yes Solenopsis invicta v.2.2.3 Red fire ant 71 60 Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 105 77 Yes Atta cephalotes v1.1 103 79 Yes Camponotus floridanus v3.3 Florida carpenter ant 102 73 Yes Lucilia cuprina Australian sheep blowfly 128 88 Yes Drosophila grimshawi 1.3 148 112 Yes Drosophila willistoni 1.3 161 128 Yes Drosophila pseudoobscura 2.13 150 116 Yes Drosophila persimilis 1.3 140 109 Yes Drosophila suzukii 166 105 Yes Drosophila yakuba 1.3 152 122 Yes Drosophila simulans 1.3 140 114 Yes Drosophila sechellia 1.3 140 113 Yes Drosophila melanogaster 76_5 Fruit fly 264 178 Yes Drosophila erecta 1.3 148 118 Yes Drosophila ananassae 1.3 154 125 Yes Drosophila virilis 1.2 144 110 Yes Drosophila mojavensis 1.3 136 105 Yes Megaselia scalaris 22 63 53 Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 142 108 Yes Culex pipiens quinquefasciatus Southern house mosquito 141 104 Yes Anopheles darlingi 22 American malaria mosquito 94 71 Yes Anopheles gambiae 49_3j African malaria mosquito 140 104 Yes Tribolium castaneum 3.0 Red flour beetle 142 104 Yes Pediculus humanus corporis Human body louse 112 80 Yes Acyrthosiphon pisum Pea aphid 106 79 Yes Rhodnius prolixus 22 116 81 Yes Daphnia pulex Common water flea 149 105 Yes Strigamia maritima 22 122 80 Yes Sarcoptes scabiei 85 56 Yes Tetranychus urticae Two-spotted spider mite 125 91 Yes Ixodes scapularis Black-legged tick 149 112 Yes Pristionchus pacificus 235 193 Yes Meloidogyne incognita Southern root-knot nematode 115 89 Yes Meloidogyne hapla 64 50 Yes Onchocerca volvulus 22 113 80 Yes Brugia malayi WS250 Agent of lymphatic filariasis 110 77 Yes Caenorhabditis japonica 150 122 Yes Caenorhabditis brenneri 206 173 Yes Caenorhabditis remanei 179 147 Yes Caenorhabditis elegans 76_235 Roundworm 258 201 Yes Caenorhabditis briggsae 2 160 129 Yes Trichinella spiralis 22 79 56 Yes Hymenolepis microstoma 74 62 Yes Echinococcus multilocularis 71 62 Yes Echinococcus granulosus 68 59 Yes Taenia solium Pork tapeworm 65 57 Yes Schistosoma mansoni 90 75 Yes Mnemiopsis leidyi Sea walnut 141 102 Yes Thelohanellus kitauei 46 36 Yes Acropora digitifera v1.0 108 90 Yes Nematostella vectensis 1.0 Starlet sea anemone 182 142 Yes Hydra vulgaris 121 90 Yes Amphimedon queenslandica 146 115 Yes Trichoplax adhaerens 156 128 Yes Proterospongia sp. ATCC 50818 111 82 Yes Monosiga brevicollis 93 77 Yes Sphaeroforma arctica JP610 113 82 Yes Capsaspora owczarzaki ATCC 30864 70 58 Yes Conidiobolus coronatus NRRL28638 v1.0 115 106 Yes Mortierella verticillata NRRL 6337 132 115 Yes Phycomyces blakesleeanus 79 70 Yes Rhizopus oryzae RA 99-880 91 74 Yes Mucor circinelloides 96 81 Yes Rhizomucor miehei CAU432 72 64 Yes Malassezia globosa CBS 7966 78 66 Yes Sporisorium reilianum 22 67 60 Yes Ustilago maydis 59 53 Yes Mixia osmundae IAM 14324 v1.0 61 54 Yes Cronartium quercuum f. sp. fusiforme G11 v1.0 53 47 Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3 50 43 Yes Melampsora laricis-populina 64 57 Yes Rhodotorula graminis WP1 v1.0 67 61 Yes Sporobolomyces roseus IAM 13481 46 42 Yes Microbotryum violaceum 22 67 59 Yes Wallemia sebi v1.0 47 41 Yes Sphaerobolus stellatus v1.0 201 189 Yes Piloderma croceum F 1598 v1.0 82 76 Yes Serpula lacrymans var. lacrymans S7.9 93 87 Yes Coniophora puteana 143 137 Yes Hydnomerulius pinastri v2.0 102 97 Yes Paxillus rubicundulus Ve08.2h10 v1.0 77 70 Yes Pisolithus microcarpus 441 v1.0 84 79 Yes Pisolithus tinctorius Marx 270 v1.0 94 88 Yes Scleroderma citrinum Foug A v1.0 94 85 Yes Coprinopsis cinerea okayama7 130 v3 80 73 Yes Pleurotus ostreatus Oyster mushroom 90 72 Yes Amanita thiersii Skay4041 v1.0 72 65 Yes Amanita muscaria Koide v1.0 Fly agaric 83 77 Yes Galerina marginata v1.0 90 84 Yes Hebeloma cylindrosporum h7 v2.0 75 69 Yes Laccaria bicolor S238N-H82 70 64 Yes Agaricus bisporus var. bisporus 85 78 Yes Schizophyllum commune 88 81 Yes Stereum hirsutum FP-91666 SS1 v1.0 108 102 Yes Heterobasidion annosum 75 69 Yes Gloeophyllum trabeum v1.0 85 78 Yes Punctularia strigosozonata v1.0 85 78 Yes Sebacina vermifera MAFF 305830 v1.0 85 78 Yes Fomitiporia mediterranea v1.0 95 87 Yes Tulasnella calospora AL13/4D v1.0 86 79 Yes Postia placenta 125 117 Yes Wolfiporia cocos MD-104 SS10 v1.0 94 87 Yes Fomitopsis pinicola v1.0 104 97 Yes Fomitopsis pinicola FP-58527 SS1 v3.0 104 98 Yes Phanerochaete chrysosporium RP-78 2.1 76 69 Yes Dichomitus squalens 91 86 Yes Trametes versicolor v1.0 107 100 Yes Tremella mesenterica Witches' butter 51 45 Yes Daldinia eschscholzii EC12 v1.0 92 81 Yes Apiospora montagnei NRRL 25634 v1.0 98 87 Yes Magnaporthe poae ATCC 64411 22 68 57 Yes Magnaporthe grisea 70-15 72 63 Yes Podospora anserina 75 66 Yes Sporotrichum thermophile ATCC 42464 66 59 Yes Thielavia terrestris NRRL 8126 76 66 Yes Chaetomium globosum CBS 148.51 62 55 Yes Neurospora tetrasperma 69 61 Yes Neurospora discreta FGSC 8579 65 57 Yes Neurospora crassa OR74A 69 61 Yes Cryphonectria parasitica Chestnut blight fungus 92 79 Yes Verticillium albo-atrum VaMs.102 66 58 Yes Verticillium dahliae VdLs.17 72 62 Yes Acremonium alcalophilum v 1.0 65 56 Yes Glomerella graminicola 22 90 80 Yes Fusarium graminearum 94 86 Yes Nectria haematococca mpVI 114 103 Yes Fusarium oxysporum f. sp. lycopersici 4286 101 91 Yes Fusarium verticillioides 7600 97 89 Yes Trichoderma asperellum CBS 433.97 v1.0 107 98 Yes Trichoderma atroviride 108 99 Yes Trichoderma citrinoviride v1.0 93 84 Yes Trichoderma reesei 1.2 85 76 Yes Trichoderma virens Gv29-8 113 104 Yes Trichoderma longibrachiatum ATCC 18648 v1.0 84 75 Yes Trichoderma harzianum CBS 226.95 v1.0 129 120 Yes Amorphotheca resinae v1.0 Creosote fungus 74 66 Yes Botrytis cinerea B05.10 74 66 Yes Sclerotinia sclerotiorum 74 66 Yes Blumeria graminis 22 50 42 Yes Didymella exigua CBS 183.55 v1.0 94 84 Yes Leptosphaeria maculans 22 80 70 Yes Setosphaeria turcica v1.0 81 72 Yes Cochliobolus miyabeanus ATCC 44560 v1.0 84 75 Yes Cochliobolus victoriae FI3 v1.0 85 76 Yes Cochliobolus carbonum 26-R-13 v1.0 83 74 Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 79 70 Yes Alternaria brassicicola 81 72 Yes Cochliobolus lunatus m118 v2.0 83 74 Yes Pyrenophora teres f. teres 22 78 69 Yes Pyrenophora tritici-repentis 79 71 Yes Stagonospora nodorum 99 83 Yes Mycosphaerella graminicola IPO323 92 83 Yes Zasmidium cellare ATCC 36951 v1.0 140 131 Yes Dothistroma septosporum 99 90 Yes Septoria musiva v1.0 82 73 Yes Mycosphaerella fijiensis CIRAD86 80 72 Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 83 75 Yes Paracoccidioides brasiliensis Pb18 57 49 Yes Coccidioides posadasii RMSCC 3488 61 53 Yes Coccidioides immitis RS 63 55 Yes Ajellomyces dermatitidis SLH14081 61 53 Yes Histoplasma capsulatum class NAmI strain WU24 62 54 Yes Microsporum canis CBS 113480 70 62 Yes Trichophyton equinum CBS 127.97 63 58 Yes Trichophyton verrucosum HKI 0517 61 54 Yes Arthroderma benhamiae CBS 112371 65 57 Yes Trichophyton tonsurans CBS 112818 65 57 Yes Trichophyton rubrum CBS 118892 70 62 Yes Uncinocarpus reesii 1704 57 48 Yes Aspergillus zonatus v1.0 92 82 Yes Penicillium chrysogenum Wisconsin 54-1255 85 77 Yes Penicillium chrysogenum v1.0 86 78 Yes Aspergillus acidus v1.0 98 90 Yes Aspergillus fumigatus Af293 86 78 Yes Aspergillus brasiliensis v1.0 95 87 Yes Aspergillus nidulans FGSC A4 90 82 Yes Aspergillus sydowii v1.0 98 90 Yes Aspergillus versicolor v1.0 97 89 Yes Aspergillus glaucus 81 73 Yes Aspergillus carbonarius ITEM 5010 92 84 Yes Neosartorya fischeri NRRL 181 92 84 Yes Aspergillus terreus NIH2624 86 78 Yes Aspergillus tubingensis v1.0 95 87 Yes Aspergillus wentii v1.0 99 91 Yes Aspergillus oryzae RIB40 92 84 Yes Aspergillus niger 22 90 82 Yes Aspergillus niger ATCC 1015 56 54 Yes Aspergillus flavus NRRL3357 107 99 Yes Aspergillus clavatus NRRL 1 82 74 Yes Penicillium marneffei ATCC 18224 99 90 Yes Tuber melanosporum Mel28 22 57 51 Yes Tuber melanosporum Vittad Perigord truffle 58 52 Yes Hansenula polymorpha v2.0 49 42 Yes Dekkera bruxellensis CBS 2499 v2.0 50 44 Yes Pichia membranifaciens v1.0 50 46 Yes Candida tanzawaensis NRRL Y-17324 v1.0 55 49 Yes Candida dubliniensis CD36 62 56 Yes Candida tropicalis MYA-3404 62 55 Yes Candida parapsilosis 51 45 Yes Candida albicans SC5314 59 53 Yes Lodderomyces elongisporus NRRL YB-4239 53 47 Yes Babjeviella inositovora NRRL Y-12698 v1.0 66 55 Yes Pichia stipitis CBS 6054 54 48 Yes Candida guilliermondii ATCC 6260 51 45 Yes Hyphopichia burtonii NRRL Y-1933 v1.0 59 52 Yes Debaromyces hansenii 60 53 Yes Wickerhamomyces anomalus 62 54 Yes Pichia pastoris GS115 52 46 Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1 29 25 Yes Yarrowia lipolytica CLIB122 56 50 Yes Candida lusitaniae ATCC 42720 45 40 Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0 50 45 Yes Vanderwaltozyma polyspora DSM 70294 54 46 Yes Candida glabrata CBS138 48 42 Yes Kluyveromyces thermotolerans CBS 6340 43 39 Yes Lachancea kluyveri 47 43 Yes Kluyveromyces waltii 43 39 Yes Ashbya gossypii ATCC 10895 42 38 Yes Zygosaccharomyces rouxii 45 40 Yes Saccharomyces mikatae MIT 53 44 Yes Saccharomyces paradoxus MIT 54 45 Yes Saccharomyces cerevisiae 76 Baker's yeast 55 46 Yes Saccharomyces bayanus MIT 56 47 Yes Kluyveromyces lactis 46 42 Yes Schizosaccharomyces cryophilus OY26 22 51 42 Yes Schizosaccharomyces octosporus yFS286 47 37 Yes Schizosaccharomyces japonicus yFS275 40 33 Yes Schizosaccharomyces pombe Fission yeast 46 37 Yes Catenaria anguillulae PL171 v1.0 56 49 Yes Allomyces macrogynus ATCC 38327 127 100 Yes Spizellomyces punctatus DAOM BR117 74 64 Yes Dictyostelium discoideum 100 87 Yes Dictyostelium purpureum 95 82 Yes Entamoeba dispar 1.2 71 60 Yes Entamoeba invadens 1.2 92 77 Yes Entamoeba histolytica 1 64 51 Yes Selaginella moellendorffii 360 319 Yes Pinus taeda Loblolly pine 355 292 Yes Picea abies Norway spruce 196 167 Yes Eucalyptus grandis v201 Rose gum 440 390 Yes Theobroma cacao B97-61/B2 v1 Cacao 247 214 Yes Gossypium raimondii v221 717 594 Yes Citrus clementina v165 356 318 Yes Citrus sinensis v154 Sweet orange 443 373 Yes Thellungiella halophila v173 307 273 Yes Brassica rapa Chiifu-401 1.2 Field mustard 421 371 Yes Capsella rubella v183 285 250 Yes Arabidopsis lyrata Lyrate rockcress 299 263 Yes Arabidopsis thaliana 10 Thale cress 365 313 Yes Carica papaya Papaya 184 159 Yes Medicago truncatula Barrel medic 397 362 Yes Phaseolus vulgaris v186 French bean 289 257 Yes Glycine max v109 Soybean 587 514 Yes Cucumis sativus v122 Cucumber 304 264 Yes Fragaria vesca Wild strawberry 245 217 Yes Malus domestica v196 Apple 547 477 Yes Prunus persica v139 Peach 270 244 Yes Linum usitatissimum v200 Flax 414 360 Yes Manihot esculenta v147 Cassava 343 302 Yes Populus trichocarpa v156 Black cottonwood 408 350 Yes Vitis vinifera Wine grape 238 203 Yes Mimulus guttatus v140 Spotted monkey flower 261 227 Yes Solanum lycopersicum v.2.3 Tomato 298 261 Yes Solanum tuberosum Potato 383 344 Yes Actinidia chinensis Hongyang 313 268 Yes Aquilegia coerulea v195 431 372 Yes Triticum urartu 22 247 224 Yes Triticum aestivum 22 Bread wheat 734 663 Yes Aegilops tauschii 22 277 245 Yes Brachypodium distachyon Stiff brome 339 296 Yes Oryza barthii 22 African wild rice 340 275 Yes Oryza meridionalis 22 355 287 Yes Oryza glumaepatula 22 363 305 Yes Oryza glaberrima African rice 216 194 Yes Oryza punctata 22 396 311 Yes Oryza nivara 22 385 317 Yes Oryza brachyantha 22 Malo sina 235 203 Yes Oryza sativa ssp. japonica 5.0 Japanese rice 385 336 Yes Oryza sativa v193 Rice 385 336 Yes Phyllostachys heterocycla var. pubescens Kikko-chiku 292 257 Yes Panicum virgatum v202 Switchgrass 584 514 Yes Setaria italica v164 Foxtail millet 347 308 Yes Zea mays subsp. mays Maize 492 430 Yes Zea mays v181 Maize 560 490 Yes Sorghum bicolor Sorghum 295 261 Yes Musa balbisiana Balbis banana 301 253 Yes Musa acuminata 22 Wild Malaysian banana 323 278 Yes Amborella trichopoda 22 197 173 Yes Physcomitrella patens 227 184 Yes Coccomyxa subellipsoidea sp. C-169 v2 109 97 Yes Asterochloris sp. Cgr/DA1pho v1.0 89 81 Yes Chlorella variabilis sp. NC64A 115 106 Yes Chlorella vulgaris 113 101 Yes Volvox carteri f. nagariensis 106 97 Yes Volvox carteri v199 120 111 Yes Chlamydomonas reinhardtii 4.0 128 116 Yes Ostreococcus sp. RCC809 91 82 Yes Ostreococcus lucimarinus CCE9901 95 86 Yes Ostreococcus tauri 85 77 Yes Bathycoccus prasinos 101 88 Yes Micromonas sp. RCC299 119 108 Yes Micromonas pusilla CCMP1545 v3.0 130 119 Yes Cyanidioschyzon merolae strain 10D 22 51 46 Yes Cyanidioschyzon merolae 51 46 Yes Porphyridium purpureum 02_2012 92 84 Yes Thecamonas trahens ATCC 50062 101 78 Yes Bigelowiella natans CCMP2755 22 187 176 Yes Giardia lamblia 2.3 28 27 Yes Cyanophora paradoxa 127 113 Yes Leishmania mexicana 2.4 63 58 Yes Leishmania major strain Friedlin 71 65 Yes Leishmania infantum JPCM5 2.4 65 60 Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4 66 60 Yes Trypanosoma vivax 65 59 Yes Trypanosoma cruzi strain CL Brener 60 54 Yes Trypanosoma congolense 2.4 64 58 Yes Trypanosoma brucei gambiense v4.1 61 56 Yes Trypanosoma brucei TREU927 v4.1 62 57 Yes Ectocarpus siliculosus 165 143 Yes Aureococcus anophagefferens 138 127 Yes Albugo laibachii 22 89 73 Yes Pythium iwayamai DAOM BR242034 22 109 92 Yes Pythium arrhenomanes ATCC 12531 22 106 86 Yes Pythium ultimum v1.7-2 124 111 Yes Pythium aphanidermatum DAOM BR444 22 113 92 Yes Pythium irregulare DAOM BR486 22 119 100 Yes Pythium vexans DAOM BR484 22 103 85 Yes Phytophthora ramorum 1.1 Sudden oak death agent 123 105 Yes Phytophthora sojae 1.1 133 111 Yes Phytophthora infestans T30-4 124 106 Yes Phytophthora capsici 145 127 Yes Hyaloperonospora arabidopsidis 22 92 74 Yes Phaeodactylum tricornutum CCAP 1055/1 114 109 Yes Fragilariopsis cylindrus 232 224 Yes Thalassiosira pseudonana CCMP1335 114 111 Yes Perkinsus marinus ATCC 50983 172 152 Yes Paramecium tetraurelia 261 180 Yes Tetrahymena thermophila SB210 1 173 147 Yes Ichthyophthirius multifiliis strain G5 85 56 Yes Cryptosporidium hominis 31 22 Yes Cryptosporidium muris 41 29 Yes Cryptosporidium parvum Iowa II 34 24 Yes Neospora caninum 73 48 Yes Toxoplasma gondii VEG 66 49 Yes Toxoplasma gondii ME49 68 51 Yes Toxoplasma gondii GT1 65 49 Yes Babesia bovis T2Bo 76 60 Yes Theileria parva 31 26 Yes Theileria annulata 33 27 Yes Plasmodium falciparum 3D7 53 44 Yes Plasmodium vivax SaI-1 7.0 54 44 Yes Plasmodium knowlesi strain H 54 45 Yes Plasmodium yoelii ssp. yoelii 1 47 39 Yes Plasmodium chabaudi 54 44 Yes Plasmodium berghei ANKA 52 43 Yes Symbiodinium minutum clade B1 v1.2 235 218 Yes Naegleria gruberi 106 93 Yes Trichomonas vaginalis 204 157 Yes Guillardia theta CCMP2712 v1.0 220 182 Yes Emiliania huxleyi CCMP1516 331 321 Yes Acholeplasma laidlawii PG-8A 11 10 Yes Thermobaculum terrenum ATCC BAA-798 25 23 Yes Leptolyngbya sp. PCC 7376 43 43 Yes Pseudanabaena sp. PCC 7367 40 40 Yes Acaryochloris marina MBIC11017 64 64 Yes Synechocystis sp. PCC 6803 37 37 Yes Thermosynechococcus sp. NK55 27 27 Yes Thermosynechococcus elongatus BP-1 27 27 Yes Synechococcus sp. PCC 7502 32 32 Yes Synechococcus sp. PCC 6312 31 31 Yes Synechococcus sp. CC9311 28 28 Yes Synechococcus elongatus PCC 7942 28 28 Yes Prochlorococcus marinus str. MIT 9515 21 21 Yes Microcoleus sp. PCC 7113 59 59 Yes Trichodesmium erythraeum IMS101 39 39 Yes Geitlerinema sp. PCC 7407 45 45 Yes Cyanothece sp. PCC 8802 43 43 Yes Gloeocapsa sp. PCC 7428 51 51 Yes cyanobacterium UCYN-A 12 12 Yes Halothece sp. PCC 7418 38 38 Yes Microcystis aeruginosa NIES-843 33 33 Yes Gloeobacter violaceus PCC 7421 38 38 Yes Rivularia sp. PCC 7116 64 64 Yes Calothrix sp. PCC 7507 49 49 Yes Anabaena variabilis ATCC 29413 55 55 Yes 'Nostoc azollae' 0708 34 34 Yes Nostoc sp. PCC 7107 56 56 Yes Nostoc punctiforme PCC 73102 59 59 Yes Nostoc sp. PCC 7120 62 62 Yes Nostoc sp. PCC 7524 54 54 Yes Anabaena sp. 90 35 35 Yes Candidatus Phytoplasma mali 2 2 Yes Aster yellows witches'-broom phytoplasma AYWB 1 1 Yes Onion yellows phytoplasma OY-M 2 2 Yes Mesoplasma florum L1 1 1 Yes Ureaplasma parvum serovar 3 str. ATCC 27815 3 3 Yes Ureaplasma urealyticum serovar 10 str. ATCC 33699 3 3 Yes Mycoplasma leachii 99/014/6 2 2 Yes Mycoplasma mycoides subsp. capri LC str. 95010 2 2 Yes Mycoplasma capricolum subsp. capricolum ATCC 27343 2 2 Yes Mycoplasma haemocanis str. Illinois 1 1 Yes Mycoplasma wenyonii str. Massachusetts 1 1 Yes Mycoplasma suis KI3806 1 1 Yes Mycoplasma crocodyli MP145 3 3 Yes Mycoplasma conjunctivae HRC/581 3 3 Yes Mycoplasma haemofelis Ohio2 1 1 Yes Mycoplasma bovis HB0801 3 3 Yes Mycoplasma penetrans HF-2 6 6 Yes Mycoplasma putrefaciens KS1 2 2 Yes Mycoplasma mobile 163K 5 5 Yes Mycoplasma fermentans M64 3 3 Yes Mycoplasma arthritidis 158L3-1 3 3 Yes Mycoplasma agalactiae PG2 3 3 Yes Mycoplasma synoviae 53 3 3 Yes Mycoplasma pulmonis UAB CTIP 3 3 Yes Mycoplasma pneumoniae 309 2 2 Yes Mycoplasma hyorhinis GDL-1 3 3 Yes Mycoplasma hyopneumoniae 168 3 3 Yes Mycoplasma hominis ATCC 23114 1 1 Yes Mycoplasma genitalium G37 2 2 Yes Mycoplasma gallisepticum str. F 4 4 Yes Conexibacter woesei DSM 14684 39 39 Yes Cryptobacterium curtum DSM 15641 7 7 Yes Eggerthella sp. YY7918 7 7 Yes Eggerthella lenta DSM 2243 9 9 Yes Slackia heliotrinireducens DSM 20476 15 14 Yes Olsenella uli DSM 7084 6 6 Yes Atopobium parvulum DSM 20469 8 7 Yes Coriobacterium glomerans PW2 3 3 Yes Rubrobacter xylanophilus DSM 9941 22 22 Yes Ilumatobacter coccineus 40 39 Yes Acidimicrobium ferrooxidans DSM 10331 15 15 Yes Thermobispora bispora DSM 43833 17 17 Yes Nakamurella multipartita DSM 44233 19 19 Yes Acidothermus cellulolyticus 11B 13 13 Yes Modestobacter marinus 31 31 Yes Blastococcus saxobsidens DD2 32 32 Yes Geodermatophilus obscurus DSM 43160 22 22 Yes Kineococcus radiotolerans SRS30216 22 22 Yes Catenulispora acidiphila DSM 44928 38 38 Yes Stackebrandtia nassauensis DSM 44728 22 22 Yes Frankia symbiont of Datisca glomerata 16 16 Yes Frankia sp. EAN1pec 27 27 Yes Frankia alni ACN14a 28 28 Yes Thermobifida fusca YX 19 19 Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 27 27 Yes Thermomonospora curvata DSM 43183 20 20 Yes Streptosporangium roseum DSM 43021 38 38 Yes Kitasatospora setae KM-6054 32 32 Yes Streptomyces coelicolor A3(2) 32 32 Yes Streptomyces sp. PAMC26508 29 29 Yes Streptomyces flavogriseus ATCC 33331 30 30 Yes Streptomyces sp. SirexAA-E 29 29 Yes Streptomyces griseus subsp. griseus NBRC 13350 32 32 Yes Streptomyces bingchenggensis BCW-1 39 39 Yes Streptomyces violaceusniger Tu 4113 39 39 Yes Streptomyces avermitilis MA-4680 30 30 Yes Streptomyces cattleya NRRL 8057 = DSM 46488 33 33 Yes Streptomyces scabiei 87.22 31 31 Yes Streptomyces hygroscopicus subsp. jinggangensis 5008 32 32 Yes Actinosynnema mirum DSM 43827 26 26 Yes Saccharomonospora viridis DSM 43017 24 23 Yes Pseudonocardia dioxanivorans CB1190 43 43 Yes Saccharopolyspora erythraea NRRL 2338 26 26 Yes Amycolatopsis mediterranei U32 34 34 Yes Kribbella flavida DSM 17836 28 28 Yes Nocardioides sp. JS614 38 38 Yes Propionibacterium propionicum F0230a 17 16 Yes Propionibacterium acnes SK137 15 14 Yes Microlunatus phosphovorus NM-1 22 22 Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 18 17 Yes Salinispora arenicola CNS-205 22 22 Yes Salinispora tropica CNB-440 23 23 Yes Verrucosispora maris AB-18-032 30 30 Yes Micromonospora sp. L5 32 32 Yes Micromonospora aurantiaca ATCC 27029 31 31 Yes Actinoplanes sp. N902-109 30 30 Yes Actinoplanes sp. SE50/110 29 29 Yes Actinoplanes missouriensis 431 28 28 Yes Segniliparus rotundus DSM 44985 16 16 Yes Tsukamurella paurometabola DSM 20162 29 28 Yes Gordonia sp. KTR9 26 26 Yes Gordonia polyisoprenivorans VH2 26 26 Yes Gordonia bronchialis DSM 43247 30 30 Yes Rhodococcus jostii RHA1 36 35 Yes Rhodococcus equi 103S 30 29 Yes Rhodococcus opacus B4 39 38 Yes Rhodococcus erythropolis PR4 31 31 Yes Nocardia cyriacigeorgica GUH-2 29 29 Yes Nocardia farcinica IFM 10152 31 31 Yes Amycolicicoccus subflavus DQS3-9A1 26 26 Yes Mycobacterium massiliense str. GO 06 19 19 Yes Mycobacterium abscessus ATCC 19977 30 30 Yes Mycobacterium sp. JLS 27 27 Yes Mycobacterium intracellulare ATCC 13950 24 24 Yes Mycobacterium avium 104 24 24 Yes Mycobacterium vanbaalenii PYR-1 38 38 Yes Mycobacterium canettii CIPT 140010059 25 25 Yes Mycobacterium africanum GM041182 26 26 Yes Mycobacterium tuberculosis KZN 1435 26 26 Yes Mycobacterium tuberculosis 26 26 Yes Mycobacterium bovis BCG str. Pasteur 1173P2 27 27 Yes Mycobacterium rhodesiae NBB3 33 33 Yes Mycobacterium ulcerans Agy99 30 30 Yes Mycobacterium gilvum PYR-GCK 37 37 Yes Mycobacterium chubuense NBB4 39 39 Yes Mycobacterium marinum M 32 32 Yes Mycobacterium smegmatis str. MC2 155 31 31 Yes Mycobacterium leprae Br4923 13 13 Yes Corynebacterium resistens DSM 45100 14 13 Yes Corynebacterium aurimucosum ATCC 700975 18 18 Yes Corynebacterium kroppenstedtii DSM 44385 13 13 Yes Corynebacterium efficiens YS-314 19 19 Yes Corynebacterium ulcerans 0102 19 19 Yes Corynebacterium urealyticum DSM 7109 13 12 Yes Corynebacterium jeikeium K411 14 13 Yes Corynebacterium variabile DSM 44702 16 16 Yes Corynebacterium pseudotuberculosis 316 18 18 Yes Corynebacterium glutamicum R 22 22 Yes Corynebacterium diphtheriae NCTC 13129 19 19 Yes Tropheryma whipplei TW08/27 5 5 Yes Sanguibacter keddieii DSM 10542 22 22 Yes Kytococcus sedentarius DSM 20547 19 18 Yes Beutenbergia cavernae DSM 12333 18 18 Yes Leifsonia xyli subsp. xyli str. CTCB07 14 14 Yes Microbacterium testaceum StLB037 14 14 Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382 17 17 Yes Jonesia denitrificans DSM 20603 20 20 Yes Intrasporangium calvum DSM 43043 27 27 Yes Brachybacterium faecium DSM 4810 15 15 Yes Isoptericola variabilis 225 22 22 Yes Xylanimonas cellulosilytica DSM 15894 19 19 Yes Cellulomonas flavigena DSM 20109 26 26 Yes Cellulomonas fimi ATCC 484 22 22 Yes [Cellvibrio] gilvus ATCC 13127 28 28 Yes Arthrobacter phenanthrenivorans Sphe3 25 25 Yes Arthrobacter chlorophenolicus A6 26 26 Yes Arthrobacter aurescens TC1 29 29 Yes Arthrobacter arilaitensis Re117 24 24 Yes Kocuria rhizophila DC2201 16 16 Yes Rothia mucilaginosa DY-18 15 15 Yes Rothia dentocariosa ATCC 17931 17 17 Yes Arthrobacter sp. Rue61a 29 29 Yes Arthrobacter sp. FB24 29 29 Yes Renibacterium salmoninarum ATCC 33209 19 19 Yes Micrococcus luteus NCTC 2665 17 17 Yes Gardnerella vaginalis 409-05 9 8 Yes Bifidobacterium longum subsp. longum JDM301 8 7 Yes Bifidobacterium animalis subsp. lactis Bl-04 8 7 Yes Bifidobacterium dentium Bd1 4 4 Yes Bifidobacterium breve ACS-071-V-Sch8b 9 8 Yes Bifidobacterium bifidum S17 9 8 Yes Bifidobacterium adolescentis ATCC 15703 3 3 Yes Arcanobacterium haemolyticum DSM 20595 12 11 Yes Mobiluncus curtisii ATCC 43063 11 11 Yes Actinomyces sp. F0330 12 12 Yes Caldilinea aerophila DSM 14535 = NBRC 104270 34 31 Yes Dehalococcoides ethenogenes 195 13 13 Yes Dehalococcoides sp. BAV1 11 11 Yes Dehalogenimonas lykanthroporepellens BL-DC-9 13 13 Yes Anaerolinea thermophila UNI-1 39 37 Yes Thermomicrobium roseum DSM 5159 22 22 Yes Sphaerobacter thermophilus DSM 20745 27 26 Yes Herpetosiphon aurantiacus DSM 785 32 31 Yes Roseiflexus sp. RS-1 33 31 Yes Roseiflexus castenholzii DSM 13941 32 30 Yes Chloroflexus sp. MS-G 35 33 Yes Chloroflexus sp. Y-400-fl 36 35 Yes Chloroflexus aggregans DSM 9485 37 35 Yes Chloroflexus aurantiacus J-10-fl 36 35 Yes Truepera radiovictrix DSM 17093 23 22 Yes Deinococcus gobiensis I-0 24 24 Yes Deinococcus deserti VCD115 24 24 Yes Deinococcus maricopensis DSM 21211 21 21 Yes Deinococcus geothermalis DSM 11300 20 20 Yes Deinococcus proteolyticus MRP 23 23 Yes Deinococcus radiodurans R1 25 25 Yes Oceanithermus profundus DSM 14977 23 22 Yes Marinithermus hydrothermalis DSM 14884 21 19 Yes Meiothermus silvanus DSM 9946 29 27 Yes Meiothermus ruber DSM 1279 23 22 Yes Thermus sp. CCB_US3_UF1 18 17 Yes Thermus scotoductus SA-01 17 16 Yes Thermus thermophilus HB27 20 19 Yes Anaerococcus prevotii DSM 20548 15 14 Yes Finegoldia magna ATCC 29328 18 18 Yes Veillonella parvula DSM 2008 7 7 Yes Megasphaera elsdenii DSM 20460 9 9 Yes Acidaminococcus intestini RyC-MR95 9 8 Yes Acidaminococcus fermentans DSM 20731 10 10 Yes Megamonas hypermegale 2 2 Yes Selenomonas sputigena ATCC 35185 10 9 Yes Selenomonas ruminantium subsp. lactilytica TAM6421 9 9 Yes Erysipelothrix rhusiopathiae str. Fujisawa 9 9 Yes Natranaerobius thermophilus JW/NM-WN-LF 16 16 Yes Symbiobacterium thermophilum IAM 14863 28 28 Yes Clostridiales genomosp. BVAB3 str. UPII9-5 9 9 Yes Clostridium clariflavum DSM 19732 18 17 Yes Eubacterium siraeum 5 5 Yes Clostridium cellulolyticum H10 15 15 Yes Clostridium thermocellum ATCC 27405 17 16 Yes Ethanoligenens harbinense YUAN-3 15 15 Yes Faecalibacterium prausnitzii 6 6 Yes Ruminococcus sp. 9 9 Yes Ruminococcus bromii 3 3 Yes Ruminococcus albus 7 9 9 Yes Thermaerobacter marianensis DSM 12885 17 15 Yes Sulfobacillus acidophilus DSM 10332 27 25 Yes Oscillibacter valericigenes Sjm18-20 11 11 Yes butyrate-producing bacterium SS3/4 9 9 Yes butyrate-producing bacterium SM4/1 7 6 Yes Candidatus Desulforudis audaxviator MP104C 10 10 Yes Thermincola potens JR 16 16 Yes Pelotomaculum thermopropionicum SI 13 13 Yes Desulfosporosinus acidiphilus SJ4 25 25 Yes Desulfosporosinus orientis DSM 765 35 35 Yes Dehalobacter sp. DCA 15 15 Yes Dehalobacter sp. CF 15 15 Yes Syntrophobotulus glycolicus DSM 8271 12 11 Yes Desulfitobacterium hafniense Y51 23 22 Yes Desulfitobacterium dehalogenans ATCC 51507 14 14 Yes Desulfotomaculum reducens MI-1 25 25 Yes Desulfotomaculum acetoxidans DSM 771 15 15 Yes Desulfotomaculum kuznetsovii DSM 6115 22 22 Yes Desulfotomaculum carboxydivorans CO-1-SRB 14 14 Yes Desulfotomaculum ruminis DSM 2154 25 25 Yes Acetobacterium woodii DSM 1030 24 24 Yes Eubacterium eligens ATCC 27750 4 4 Yes Eubacterium limosum KIST612 21 20 Yes Clostridium difficile 630 12 12 Yes Clostridium sticklandii DSM 519 18 18 Yes Filifactor alocis ATCC 35896 9 9 Yes Clostridium saccharolyticum WM1 16 15 Yes Clostridium phytofermentans ISDg 25 25 Yes Clostridium lentocellum DSM 5427 21 20 Yes [Ruminococcus] obeum 9 9 Yes [Ruminococcus] torques 5 5 Yes Eubacterium rectale M104/1 5 5 Yes Eubacterium rectale ATCC 33656 6 6 Yes Coprococcus sp. ART55/1 4 4 Yes Roseburia hominis A2-183 6 6 Yes Roseburia intestinalis 6 6 Yes Butyrivibrio proteoclasticus B316 8 8 Yes Butyrivibrio fibrisolvens 7 7 Yes Syntrophothermus lipocalidus DSM 12680 5 5 Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen 12 12 Yes Heliobacterium modesticaldum Ice1 11 10 Yes Alkaliphilus oremlandii OhILAs 22 22 Yes Alkaliphilus metalliredigens QYMF 29 29 Yes Candidatus Arthromitus sp. SFB-mouse-Japan 5 5 Yes Clostridium sp. BNL1100 18 17 Yes Clostridium novyi NT 6 6 Yes Clostridium ljungdahlii DSM 13528 10 10 Yes Clostridium kluyveri DSM 555 13 12 Yes Clostridium beijerinckii NCIMB 8052 27 26 Yes Clostridium tetani E88 9 9 Yes Clostridium perfringens ATCC 13124 15 14 Yes Clostridium cellulovorans 743B 14 14 Yes Clostridium botulinum A str. ATCC 3502 14 14 Yes Clostridium acetobutylicum ATCC 824 12 12 Yes Mahella australiensis 50-1 BON 11 11 Yes Thermosediminibacter oceani DSM 16646 15 15 Yes Caldicellulosiruptor obsidiansis OB47 7 7 Yes Caldicellulosiruptor kronotskyensis 2002 7 7 Yes Caldicellulosiruptor hydrothermalis 108 7 7 Yes Caldicellulosiruptor owensensis OL 7 7 Yes Caldicellulosiruptor lactoaceticus 6A 6 6 Yes Caldicellulosiruptor kristjanssonii 177R1B 6 6 Yes Caldicellulosiruptor saccharolyticus DSM 8903 8 8 Yes Caldicellulosiruptor bescii DSM 6725 7 7 Yes Thermoanaerobacterium xylanolyticum LX-11 15 14 Yes Thermoanaerobacterium thermosaccharolyticum DSM 571 14 13 Yes Thermodesulfobium narugense DSM 14796 17 16 Yes Coprothermobacter proteolyticus DSM 5265 11 10 Yes Tepidanaerobacter acetatoxydans Re1 10 10 Yes Thermoanaerobacter tengcongensis MB4 14 12 Yes Carboxydothermus hydrogenoformans Z-2901 12 11 Yes Moorella thermoacetica ATCC 39073 11 11 Yes Ammonifex degensii KC4 6 6 Yes Thermoanaerobacter mathranii subsp. mathranii str. A3 13 12 Yes Thermoanaerobacter pseudethanolicus ATCC 33223 15 13 Yes Thermoanaerobacter sp. X514 16 14 Yes Thermoanaerobacter italicus Ab9 13 12 Yes Thermoanaerobacter wiegelii Rt8.B1 15 13 Yes Thermoanaerobacter brockii subsp. finnii Ako-1 15 13 Yes Acetohalobium arabaticum DSM 5501 22 22 Yes Halothermothrix orenii H 168 18 17 Yes Halanaerobium hydrogeniformans 17 16 Yes Halanaerobium praevalens DSM 2228 22 20 Yes Carnobacterium sp. 17-4 18 18 Yes Carnobacterium sp. WN1359 17 17 Yes Aerococcus urinae ACS-120-V-Col10a 8 8 Yes Tetragenococcus halophilus NBRC 12172 13 13 Yes Melissococcus plutonius DAT561 11 10 Yes Enterococcus sp. 7L76 13 13 Yes Enterococcus hirae ATCC 9790 15 14 Yes Enterococcus faecium Aus0004 17 16 Yes Enterococcus faecalis 62 17 16 Yes Weissella koreensis KACC 15510 11 11 Yes Oenococcus oeni PSU-1 7 7 Yes Leuconostoc sp. C2 6 6 Yes Leuconostoc kimchii IMSNU 11154 14 14 Yes Leuconostoc citreum KM20 17 16 Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 13 12 Yes Leuconostoc gasicomitatum LMG 18811 10 9 Yes Lactobacillus casei ATCC 334 13 13 Yes Lactobacillus kefiranofaciens ZW3 7 7 Yes Lactobacillus crispatus ST1 7 7 Yes Lactobacillus rhamnosus Lc 705 12 12 Yes Lactobacillus johnsonii FI9785 8 8 Yes Lactobacillus sanfranciscensis TMW 1.1304 8 8 Yes Lactobacillus salivarius CECT 5713 4 4 Yes Lactobacillus ruminis ATCC 27782 9 9 Yes Lactobacillus fermentum IFO 3956 13 12 Yes Lactobacillus amylovorus GRL1118 5 5 Yes Lactobacillus sakei subsp. sakei 23K 9 9 Yes Lactobacillus reuteri DSM 20016 10 9 Yes Lactobacillus gasseri ATCC 33323 6 6 Yes Lactobacillus plantarum JDM1 13 13 Yes Lactobacillus helveticus DPC 4571 6 6 Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 6 6 Yes Lactobacillus buchneri NRRL B-30929 11 11 Yes Lactobacillus buchneri 10 10 Yes Lactobacillus brevis ATCC 367 11 11 Yes Lactobacillus acidophilus 30SC 6 6 Yes Pediococcus claussenii ATCC BAA-344 9 9 Yes Pediococcus pentosaceus ATCC 25745 8 8 Yes Lactococcus garvieae ATCC 49156 19 18 Yes Lactococcus lactis subsp. cremoris MG1363 16 15 Yes Streptococcus sp. I-P16 14 14 Yes Streptococcus sp. I-G2 15 15 Yes Streptococcus intermedius JTH08 15 14 Yes Streptococcus gallolyticus UCN34 16 15 Yes Streptococcus pseudopneumoniae IS7493 13 13 Yes Streptococcus pasteurianus ATCC 43144 12 11 Yes Streptococcus equi subsp. equi 4047 11 10 Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124 17 16 Yes Streptococcus infantarius subsp. infantarius CJ18 11 11 Yes Streptococcus macedonicus ACA-DC 198 11 11 Yes Streptococcus mitis B6 12 12 Yes Streptococcus uberis 0140J 14 13 Yes Streptococcus parauberis KCTC 11537 15 14 Yes Streptococcus parasanguinis ATCC 15912 16 16 Yes Streptococcus pyogenes str. Manfredo 13 12 Yes Streptococcus pneumoniae P1031 13 13 Yes Streptococcus agalactiae A909 15 14 Yes Streptococcus mutans NN2025 14 13 Yes Streptococcus thermophilus LMD-9 10 10 Yes Streptococcus suis P1/7 13 13 Yes Streptococcus sanguinis SK36 16 16 Yes Streptococcus salivarius 57.I 15 14 Yes Streptococcus oralis Uo5 11 11 Yes Streptococcus gordonii str. Challis substr. CH1 15 15 Yes Exiguobacterium sp. MH3 25 24 Yes Exiguobacterium sp. AT1b 27 26 Yes Exiguobacterium sibiricum 255-15 25 24 Yes Kyrpidia tusciae DSM 2912 19 18 Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 21 19 Yes Brevibacillus brevis NBRC 100599 39 38 Yes Paenibacillus sp. JDR-2 23 23 Yes Paenibacillus terrae HPL-003 25 25 Yes Paenibacillus mucilaginosus 3016 25 25 Yes Paenibacillus polymyxa M1 25 25 Yes Bacillus selenitireducens MLS10 28 27 Yes Listeria welshimeri serovar 6b str. SLCC5334 14 14 Yes Listeria innocua Clip11262 15 15 Yes Listeria seeligeri serovar 1/2b str. SLCC3954 14 14 Yes Listeria monocytogenes serotype 4b str. CLIP 80459 15 15 Yes Listeria ivanovii subsp. ivanovii PAM 55 14 14 Yes Solibacillus silvestris StLB046 31 30 Yes Geobacillus thermoglucosidasius C56-YS93 28 28 Yes Lysinibacillus sphaericus C3-41 26 26 Yes Oceanobacillus iheyensis HTE831 26 26 Yes Anoxybacillus flavithermus WK1 29 28 Yes Geobacillus thermoleovorans CCB_US3_UF5 25 24 Yes Geobacillus kaustophilus HTA426 27 26 Yes Geobacillus sp. GHH01 24 23 Yes Geobacillus sp. WCH70 26 25 Yes Geobacillus thermodenitrificans NG80-2 27 26 Yes Halobacillus halophilus DSM 2266 32 31 Yes Bacillus sp. JS 28 27 Yes Bacillus sp. 1NLA3E 29 29 Yes Bacillus amyloliquefaciens FZB42 29 28 Yes Bacillus atrophaeus 1942 25 24 Yes Bacillus subtilis subsp. subtilis str. 168 32 31 Yes Bacillus licheniformis DSM 13 = ATCC 14580 28 27 Yes Bacillus halodurans C-125 24 24 Yes Bacillus weihenstephanensis KBAB4 32 31 Yes Bacillus thuringiensis str. Al Hakam 30 29 Yes Bacillus cereus 03BB102 30 29 Yes Bacillus anthracis str. A0248 29 28 Yes Bacillus pseudofirmus OF4 33 32 Yes Bacillus clausii KSM-K16 24 24 Yes Bacillus cellulosilyticus DSM 2522 36 35 Yes Bacillus pumilus SAFR-032 28 28 Yes Bacillus megaterium DSM 319 29 29 Yes Bacillus coagulans 2-6 22 21 Yes Macrococcus caseolyticus JCSC5402 19 18 Yes Staphylococcus pseudintermedius HKU10-03 20 19 Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 21 20 Yes Staphylococcus lugdunensis HKU09-01 19 18 Yes Staphylococcus haemolyticus JCSC1435 19 18 Yes Staphylococcus epidermidis RP62A 20 19 Yes Staphylococcus carnosus subsp. carnosus TM300 19 18 Yes Staphylococcus aureus subsp. aureus JH1 20 19 Yes Staphylococcus aureus 10 9 Yes Candidatus Cloacamonas acidaminovorans 15 15 Yes Gemmatimonas aurantiaca T-27 26 26 Yes Melioribacter roseus P3M 29 28 Yes Ignavibacterium album JCM 16511 42 42 Yes Pelodictyon phaeoclathratiforme BU-1 17 17 Yes Chlorobium luteolum DSM 273 15 15 Yes Chlorobium chlorochromatii CaD3 14 14 Yes Chlorobium phaeobacteroides DSM 266 16 16 Yes Chlorobium phaeovibrioides DSM 265 15 15 Yes Chlorobium limicola DSM 245 17 17 Yes Chlorobaculum parvum NCIB 8327 17 17 Yes Chlorobium tepidum TLS 17 17 Yes Chloroherpeton thalassium ATCC 35110 31 31 Yes Prosthecochloris aestuarii DSM 271 13 13 Yes Haliscomenobacter hydrossis DSM 1100 49 48 Yes Saprospira grandis str. Lewin 42 40 Yes Niastella koreensis GR20-10 72 71 Yes Chitinophaga pinensis DSM 2588 88 87 Yes Salinibacter ruber M8 25 25 Yes Rhodothermus marinus DSM 4252 24 24 Yes Flexibacter litoralis DSM 6794 44 44 Yes Candidatus Amoebophilus asiaticus 5a2 4 4 Yes Candidatus Cardinium hertigii 3 3 Yes Belliella baltica DSM 15883 33 33 Yes Cyclobacterium marinum DSM 745 34 33 Yes Marivirga tractuosa DSM 4126 36 36 Yes Fibrella aestuarina 42 42 Yes Leadbetterella byssophila DSM 17132 43 43 Yes Dyadobacter fermentans DSM 18053 42 41 Yes Cytophaga hutchinsonii ATCC 33406 32 32 Yes Spirosoma linguale DSM 74 55 55 Yes Runella slithyformis DSM 19594 39 38 Yes Parabacteroides distasonis ATCC 8503 27 26 Yes Tannerella forsythia ATCC 43037 16 16 Yes Paludibacter propionicigenes WB4 38 38 Yes Odoribacter splanchnicus DSM 20712 97 84 Yes Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2 2 Yes Bacteroides sp. CF50 35 32 Yes Prevotella melaninogenica ATCC 25845 18 17 Yes Prevotella intermedia 17 17 15 Yes Prevotella denticola F0289 17 16 Yes Prevotella ruminicola 23 19 19 Yes Porphyromonas asaccharolytica DSM 20707 16 15 Yes Porphyromonas gingivalis ATCC 33277 18 17 Yes Alistipes finegoldii DSM 17242 16 16 Yes Bacteroides salanitronis DSM 18170 14 14 Yes Bacteroides helcogenes P 36-108 25 24 Yes Bacteroides vulgatus ATCC 8482 33 32 Yes Bacteroides thetaiotaomicron VPI-5482 34 33 Yes Bacteroides fragilis YCH46 32 31 Yes Pedobacter saltans DSM 12145 33 33 Yes Solitalea canadensis DSM 3403 48 48 Yes Pedobacter heparinus DSM 2366 46 46 Yes Sphingobacterium sp. 21 53 52 Yes Fluviicola taffensis DSM 16823 38 38 Yes Owenweeksia hongkongensis DSM 17368 38 38 Yes Zunongwangia profunda SM-A87 46 46 Yes Krokinobacter sp. 4H-3-7-5 39 39 Yes Gramella forsetii KT0803 33 33 Yes Lacinutrix sp. 5H-3-7-4 32 32 Yes Maribacter sp. HTCC2170 33 33 Yes Robiginitalea biformata HTCC2501 22 22 Yes Croceibacter atlanticus HTCC2559 36 36 Yes Aequorivita sublithincola DSM 14238 37 37 Yes Zobellia galactanivorans 39 39 Yes Muricauda ruestringensis DSM 13258 35 35 Yes Cellulophaga algicola DSM 14237 36 36 Yes Cellulophaga lytica DSM 7489 43 43 Yes Flavobacteriaceae bacterium 3519-10 24 24 Yes Polaribacter sp. MED152 32 32 Yes Riemerella anatipestifer ATCC 11845 = DSM 15868 23 23 Yes Ornithobacterium rhinotracheale DSM 15997 16 16 Yes Capnocytophaga canimorsus Cc5 23 23 Yes Capnocytophaga ochracea DSM 7271 16 16 Yes Weeksella virosa DSM 16922 32 32 Yes Flavobacterium indicum GPTSA100-9 37 37 Yes Flavobacterium psychrophilum JIP02/86 30 30 Yes Flavobacterium branchiophilum FL-15 29 29 Yes Flavobacterium columnare ATCC 49512 32 32 Yes Flavobacterium johnsoniae UW101 50 50 Yes Blattabacterium sp. (Nauphoeta cinerea) 3 3 Yes Blattabacterium sp. (Blattella germanica) str. Bge 3 3 Yes Fibrobacter succinogenes subsp. succinogenes S85 13 13 Yes Waddlia chondrophila WSU 86-1044 13 13 Yes Candidatus Protochlamydia amoebophila UWE25 15 15 Yes Parachlamydia acanthamoebae UV-7 16 16 Yes Simkania negevensis Z 13 13 Yes Chlamydophila pecorum E58 7 7 Yes Chlamydia muridarum Nigg 7 7 Yes Chlamydophila pneumoniae TW-183 7 7 Yes Chlamydophila caviae GPIC 7 7 Yes Chlamydophila felis Fe/C-56 7 7 Yes Chlamydophila abortus S26/3 7 7 Yes Chlamydia psittaci 01DC11 7 7 Yes Chlamydia trachomatis B/Jali20/OT 7 7 Yes Phycisphaera mikurensis NBRC 102666 16 16 Yes Isosphaera pallida ATCC 43644 47 46 Yes Planctomyces brasiliensis DSM 5305 30 30 Yes Planctomyces limnophilus DSM 3776 38 38 Yes Rhodopirellula baltica SH 1 41 41 Yes Pirellula staleyi DSM 6068 39 38 Yes Methylacidiphilum infernorum V4 19 19 Yes Coraliomargarita akajimensis DSM 45221 27 26 Yes Opitutus terrae PB90-1 33 32 Yes Akkermansia muciniphila ATCC BAA-835 16 16 Yes Fretibacterium fastidiosum 9 8 Yes Thermovirga lienii DSM 17291 14 14 Yes Aminobacterium colombiense DSM 12261 12 12 Yes Thermanaerovibrio acidaminovorans DSM 6589 13 13 Yes Anaerobaculum mobile DSM 13181 17 17 Yes Turneriella parva DSM 21527 35 35 Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550 28 28 Yes Leptospira interrogans serovar Lai str. IPAV 31 31 Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 41 40 Yes Brachyspira murdochii DSM 12563 15 15 Yes Brachyspira intermedia PWS/A 15 15 Yes Brachyspira pilosicoli 95/1000 13 13 Yes Brachyspira hyodysenteriae WA1 16 16 Yes Borrelia garinii PBi 2 2 Yes Borrelia bissettii DN127 2 2 Yes Borrelia afzelii PKo 2 2 Yes Borrelia burgdorferi B31 2 2 Yes Borrelia recurrentis A1 2 2 Yes Borrelia duttonii Ly 2 2 Yes Borrelia crocidurae str. Achema 2 2 Yes Borrelia turicatae 91E135 2 2 Yes Borrelia hermsii DAH 3 3 Yes Spirochaeta smaragdinae DSM 11293 29 29 Yes Sphaerochaeta pleomorpha str. Grapes 15 15 Yes Sphaerochaeta globus str. Buddy 19 19 Yes Sphaerochaeta coccoides DSM 17374 6 6 Yes Spirochaeta caldaria DSM 7334 18 18 Yes Treponema azotonutricium ZAS-9 13 13 Yes Treponema primitia ZAS-2 12 12 Yes Treponema brennaborense DSM 12168 13 13 Yes Treponema paraluiscuniculi Cuniculi A 4 4 Yes Treponema succinifaciens DSM 2489 5 5 Yes Treponema pallidum subsp. pallidum SS14 8 8 Yes Treponema denticola ATCC 35405 8 8 Yes Spirochaeta africana DSM 8902 21 20 Yes Spirochaeta thermophila DSM 6192 20 20 Yes Thermodesulfatator indicus DSM 15286 8 8 Yes Thermodesulfobacterium sp. OPB45 7 7 Yes Desulfurispirillum indicum S5 18 18 Yes Calditerrivibrio nitroreducens DSM 19672 15 15 Yes Denitrovibrio acetiphilus DSM 12809 18 18 Yes Deferribacter desulfuricans SSM1 19 19 Yes Flexistipes sinusarabici DSM 4947 12 12 Yes Marinitoga piezophila KA3 11 10 Yes Petrotoga mobilis SJ95 12 11 Yes Mesotoga prima MesG1.Ag.4.2 17 16 Yes Kosmotoga olearia TBF 19.5.1 15 14 Yes Fervidobacterium pennivorans DSM 9078 19 18 Yes Fervidobacterium nodosum Rt17-B1 18 17 Yes Thermosipho melanesiensis BI429 20 19 Yes Thermosipho africanus TCF52B 18 17 Yes Thermotoga lettingae TMO 17 16 Yes Thermotoga thermarum DSM 5069 17 16 Yes Thermotoga sp. RQ2 17 16 Yes Thermotoga naphthophila RKU-10 17 16 Yes Thermotoga petrophila RKU-1 17 16 Yes Thermotoga neapolitana DSM 4359 17 16 Yes Thermotoga maritima MSB8 16 15 Yes Thermovibrio ammonificans HB-1 14 14 Yes Desulfurobacterium thermolithotrophum DSM 11699 10 10 Yes Sulfurihydrogenibium sp. YO3AOP1 23 22 Yes Sulfurihydrogenibium azorense Az-Fu1 19 19 Yes Persephonella marina EX-H1 23 22 Yes Hydrogenobaculum sp. SN 20 19 Yes Hydrogenobaculum sp. HO 20 19 Yes Hydrogenobaculum sp. Y04AAS1 21 20 Yes Thermocrinis albus DSM 14484 23 22 Yes Aquifex aeolicus VF5 22 21 Yes Hydrogenobacter thermophilus TK-6 29 28 Yes Elusimicrobium minutum Pei191 9 9 Yes uncultured Termite group 1 bacterium phylotype Rs-D17 4 4 Yes Dictyoglomus turgidum DSM 6724 14 13 Yes Dictyoglomus thermophilum H-6-12 15 14 Yes Caldisericum exile AZM16c01 14 13 Yes Candidatus Chloracidobacterium thermophilum B 29 29 Yes Candidatus Solibacter usitatus Ellin6076 57 54 Yes Granulicella tundricola MP5ACTX9 36 34 Yes Granulicella mallensis MP5ACTX8 34 33 Yes Candidatus Koribacter versatilis Ellin345 31 31 Yes Terriglobus saanensis SP1PR4 37 36 Yes Terriglobus roseus DSM 18391 33 31 Yes Acidobacterium capsulatum ATCC 51196 24 24 Yes Thermodesulfovibrio yellowstonii DSM 11347 11 11 Yes Candidatus Nitrospira defluvii 33 33 Yes Leptospirillum ferrooxidans C2-3 25 25 Yes Streptobacillus moniliformis DSM 12112 8 8 Yes Sebaldella termitidis ATCC 33386 23 22 Yes Leptotrichia buccalis C-1013-b 15 14 Yes Ilyobacter polytropus DSM 2926 21 20 Yes Fusobacterium nucleatum subsp. nucleatum ATCC 25586 12 11 Yes Candidatus Methylomirabilis oxyfera 16 15 Yes candidate division WWE3 bacterium RAAC2_WWE3_1 11 11 Yes candidate division SR1 bacterium RAAC1_SR1_1 8 8 Yes Candidatus Saccharibacteria bacterium RAAC3_TM7_1 5 5 Yes Candidatus Saccharimonas aalborgensis 5 5 Yes Acidithiobacillus ferrivorans SS3 39 39 Yes Acidithiobacillus caldus SM-1 45 45 Yes Acidithiobacillus ferrooxidans ATCC 53993 31 31 Yes Bacteriovorax marinus SJ 36 34 Yes Bdellovibrio bacteriovorus HD100 34 33 Yes Nautilia profundicola AmH 13 13 Yes Nitratifractor salsuginis DSM 16511 29 29 Yes Sulfurospirillum deleyianum DSM 6946 16 16 Yes Sulfurospirillum barnesii SES-3 21 21 Yes Arcobacter sp. L 31 30 Yes Arcobacter nitrofigilis DSM 7299 34 34 Yes Arcobacter butzleri RM4018 20 20 Yes Campylobacter hominis ATCC BAA-381 10 10 Yes Campylobacter lari RM2100 15 15 Yes Campylobacter curvus 525.92 16 16 Yes Campylobacter concisus 13826 13 13 Yes Campylobacter jejuni subsp. doylei 269.97 16 16 Yes Campylobacter sp. 03-427 14 14 Yes Campylobacter fetus subsp. fetus 82-40 13 13 Yes uncultured Sulfuricurvum sp. RIFRC-1 25 25 Yes Sulfuricurvum kujiense DSM 16994 29 29 Yes Sulfurimonas autotrophica DSM 16294 26 26 Yes Sulfurimonas denitrificans DSM 1251 22 22 Yes Wolinella succinogenes DSM 1740 18 18 Yes Helicobacter cetorum MIT 00-7128 7 7 Yes Helicobacter bizzozeronii CIII-1 6 6 Yes Helicobacter hepaticus ATCC 51449 10 10 Yes Helicobacter mustelae 12198 10 10 Yes Helicobacter felis ATCC 49179 7 7 Yes Helicobacter cinaedi PAGU611 10 10 Yes Helicobacter acinonychis str. Sheeba 7 7 Yes Helicobacter pylori B38 7 7 Yes Nitratiruptor sp. SB155-2 23 23 Yes Sulfurovum sp. NBC37-1 35 35 Yes Desulfarculus baarsii DSM 2075 23 23 Yes Desulfobacca acetoxidans DSM 11109 24 24 Yes Syntrophus aciditrophicus SB 29 29 Yes Desulfomonile tiedjei DSM 6799 49 49 Yes Syntrophobacter fumaroxidans MPOB 29 28 Yes Desulfurivibrio alkaliphilus AHT2 11 11 Yes Desulfotalea psychrophila LSv54 17 17 Yes Desulfobulbus propionicus DSM 2032 29 29 Yes Desulfatibacillum alkenivorans AK-01 25 25 Yes Desulfobacterium autotrophicum HRM2 25 25 Yes Desulfococcus oleovorans Hxd3 19 19 Yes Desulfohalobium retbaense DSM 5692 15 14 Yes Desulfomicrobium baculatum DSM 4028 22 21 Yes Desulfovibrio piezophilus 22 21 Yes Desulfovibrio aespoeensis Aspo-2 16 16 Yes Lawsonia intracellularis PHE/MN1-00 5 5 Yes Desulfovibrio magneticus RS-1 30 29 Yes Desulfovibrio alaskensis G20 24 23 Yes Desulfovibrio vulgaris subsp. vulgaris DP4 16 15 Yes Desulfovibrio salexigens DSM 2638 21 20 Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 8 8 Yes Desulfovibrio africanus str. Walvis Bay 25 24 Yes Hippea maritima DSM 10411 14 14 Yes Geobacter daltonii FRC-32 26 26 Yes Geobacter sp. M21 28 28 Yes Geobacter uraniireducens Rf4 27 27 Yes Geobacter lovleyi SZ 27 27 Yes Geobacter bemidjiensis Bem 25 25 Yes Geobacter sulfurreducens KN400 29 29 Yes Geobacter metallireducens GS-15 32 32 Yes Pelobacter propionicus DSM 2379 32 32 Yes Pelobacter carbinolicus DSM 2380 27 27 Yes Babela massiliensis 8 8 Yes Haliangium ochraceum DSM 14365 69 65 Yes Sorangium cellulosum 'So ce 56' 106 99 Yes Anaeromyxobacter sp. Fw109-5 37 35 Yes Anaeromyxobacter dehalogenans 2CP-1 43 40 Yes Stigmatella aurantiaca DW4/3-1 77 71 Yes Corallococcus coralloides DSM 2259 73 71 Yes Myxococcus xanthus DK 1622 66 63 Yes Myxococcus fulvus HW-1 69 66 Yes Dechloromonas aromatica RCB 57 56 Yes Thauera sp. MZ1T 44 43 Yes Azoarcus sp. KH32C 52 52 Yes Azoarcus sp. BH72 52 51 Yes Aromatoleum aromaticum EbN1 46 46 Yes Dechlorosoma suillum PS 51 49 Yes Pseudogulbenkiania sp. NH8B 46 46 Yes Laribacter hongkongensis HLHK9 29 28 Yes Chromobacterium violaceum ATCC 12472 47 47 Yes Neisseria meningitidis alpha14 22 22 Yes Neisseria meningitidis FAM18 22 22 Yes Neisseria lactamica 020-06 20 20 Yes Neisseria gonorrhoeae NCCP11945 22 22 Yes syncytium symbiont of Diaphorina citri 6 6 Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1 55 54 Yes beta proteobacterium CB 32 31 Yes Methylibium petroleiphilum PM1 66 65 Yes Thiomonas arsenitoxydans 53 52 Yes Thiomonas intermedia K12 50 49 Yes Rubrivivax gelatinosus IL144 45 44 Yes Leptothrix cholodnii SP-6 63 60 Yes Burkholderia rhizoxinica HKI 454 37 35 Yes Burkholderia phytofirmans PsJN 82 80 Yes Burkholderia phymatum STM815 74 73 Yes Burkholderia xenovorans LB400 74 73 Yes Ralstonia eutropha JMP134 68 68 Yes Cupriavidus taiwanensis LMG 19424 57 57 Yes Cupriavidus metallidurans CH34 66 66 Yes Cupriavidus necator N-1 72 72 Yes Ralstonia eutropha H16 73 73 Yes Ralstonia pickettii 12D 64 63 Yes Ralstonia solanacearum CFBP2957 56 55 Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 30 29 Yes Burkholderia sp. RPE64 73 72 Yes Burkholderia sp. CCGE1002 67 65 Yes Burkholderia thailandensis E264 57 56 Yes Burkholderia pseudomallei 1106a 58 57 Yes Burkholderia mallei SAVP1 48 48 Yes Burkholderia ambifaria AMMD 65 64 Yes Burkholderia cenocepacia HI2424 68 67 Yes Burkholderia multivorans ATCC 17616 65 64 Yes Burkholderia vietnamiensis G4 65 64 Yes Burkholderia gladioli BSR3 78 75 Yes Burkholderia glumae BGR1 54 53 Yes Verminephrobacter eiseniae EF01-2 34 33 Yes Alicycliphilus denitrificans K601 57 56 Yes Ramlibacter tataouinensis TTB310 49 48 Yes Delftia sp. Cs1-4 62 60 Yes Delftia acidovorans SPH-1 59 58 Yes Polaromonas sp. JS666 74 73 Yes Polaromonas naphthalenivorans CJ2 64 63 Yes Variovorax paradoxus S110 79 78 Yes Rhodoferax ferrireducens T118 53 53 Yes Acidovorax ebreus TPSY 43 42 Yes Acidovorax sp. KKS102 58 57 Yes Acidovorax sp. JS42 56 55 Yes Acidovorax citrulli AAC00-1 47 46 Yes Acidovorax avenae subsp. avenae ATCC 19860 48 47 Yes Comamonas testosteroni CNB-2 57 55 Yes Candidatus Zinderia insecticola CARI 2 2 Yes Herminiimonas arsenicoxydans 42 41 Yes Collimonas fungivorans Ter331 58 57 Yes Janthinobacterium sp. Marseille 56 54 Yes Herbaspirillum seropedicae SmR1 44 43 Yes Pusillimonas sp. T7-7 49 48 Yes Advenella kashmirensis WT001 57 57 Yes Taylorella asinigenitalis MCE3 18 17 Yes Taylorella equigenitalis MCE9 18 17 Yes Bordetella petrii DSM 12804 70 70 Yes Bordetella avium 197N 40 40 Yes Bordetella pertussis Tohama I 35 35 Yes Bordetella parapertussis 12822 50 50 Yes Bordetella bronchiseptica RB50 51 51 Yes Achromobacter xylosoxidans A8 79 79 Yes Achromobacter xylosoxidans 79 79 Yes Thiobacillus denitrificans ATCC 25259 48 48 Yes Nitrosospira multiformis ATCC 25196 42 42 Yes Nitrosomonas sp. Is79A3 35 35 Yes Nitrosomonas eutropha C91 40 40 Yes Nitrosomonas europaea ATCC 19718 33 33 Yes Sideroxydans lithotrophicus ES-1 40 40 Yes Gallionella capsiferriformans ES-2 31 31 Yes Methylotenera versatilis 301 41 40 Yes Methylotenera mobilis JLW8 34 33 Yes Methylovorus sp. MP688 36 35 Yes Methylovorus glucosetrophus SIP3-4 36 35 Yes Methylobacillus flagellatus KT 33 32 Yes Magnetococcus marinus MC-1 29 29 Yes Parvularcula bermudensis HTCC2503 27 27 Yes Asticcacaulis excentricus CB 48 35 34 Yes Brevundimonas subvibrioides ATCC 15264 35 35 Yes Caulobacter sp. K31 65 64 Yes Caulobacter crescentus NA1000 50 48 Yes Caulobacter segnis ATCC 21756 55 54 Yes Phenylobacterium zucineum HLK1 58 57 Yes Erythrobacter litoralis HTCC2594 49 48 Yes Sphingopyxis alaskensis RB2256 52 51 Yes Novosphingobium sp. PP1Y 60 59 Yes Novosphingobium aromaticivorans DSM 12444 55 54 Yes Sphingobium sp. SYK-6 49 48 Yes Sphingobium japonicum UT26S 51 50 Yes Sphingobium chlorophenolicum L-1 49 48 Yes Sphingomonas sp. MM-1 58 58 Yes Sphingomonas wittichii RW1 67 67 Yes Zymomonas mobilis subsp. mobilis NCIMB 11163 16 16 Yes Maricaulis maris MCS10 41 41 Yes Hirschia baltica ATCC 49814 44 44 Yes Hyphomonas neptunium ATCC 15444 47 47 Yes Dinoroseobacter shibae DFL 12 52 52 Yes Phaeobacter gallaeciensis 2.10 44 44 Yes Pseudovibrio sp. FO-BEG1 62 61 Yes Jannaschia sp. CCS1 40 40 Yes Ruegeria sp. TM1040 43 43 Yes Ruegeria pomeroyi DSS-3 58 57 Yes Ketogulonicigenium vulgare Y25 27 27 Yes Ketogulonigenium vulgarum WSH-001 26 26 Yes Roseobacter litoralis Och 149 50 50 Yes Roseobacter denitrificans OCh 114 40 40 Yes Rhodobacter sphaeroides ATCC 17029 34 34 Yes Rhodobacter capsulatus SB 1003 31 31 Yes Paracoccus denitrificans PD1222 56 56 Yes Rhodospirillum photometricum DSM 122 24 24 Yes Tistrella mobilis KA081020-065 61 61 Yes Magnetospirillum magneticum AMB-1 38 38 Yes Rhodospirillum centenum SW 37 37 Yes Rhodospirillum rubrum F11 35 34 Yes Azospirillum lipoferum 4B 50 49 Yes Azospirillum sp. B510 51 50 Yes Azospirillum brasilense Sp245 47 46 Yes Gluconacetobacter xylinus NBRC 3288 34 33 Yes Granulibacter bethesdensis CGDNIH1 30 30 Yes Gluconacetobacter diazotrophicus PAl 5 45 44 Yes Acidiphilium multivorum AIU301 48 48 Yes Acidiphilium cryptum JF-5 33 33 Yes Gluconobacter oxydans 621H 27 26 Yes Acetobacter pasteurianus IFO 3283-01 29 29 Yes Polymorphum gilvum SL003B-26A1 43 43 Yes Micavibrio aeruginosavorus ARL-13 22 22 Yes Candidatus Puniceispirillum marinum IMCC1322 32 32 Yes alpha proteobacterium HIMB5 16 16 Yes alpha proteobacterium HIMB59 16 16 Yes Candidatus Pelagibacter sp. IMCC9063 16 16 Yes Candidatus Midichloria mitochondrii IricVA 11 11 Yes Neorickettsia sennetsu str. Miyayama 11 11 Yes Neorickettsia risticii str. Illinois 11 11 Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel 11 11 Yes Wolbachia sp. wRi 11 11 Yes Ehrlichia chaffeensis str. Arkansas 14 14 Yes Ehrlichia canis str. Jake 14 14 Yes Ehrlichia ruminantium str. Gardel 14 14 Yes Anaplasma phagocytophilum HZ 15 15 Yes Anaplasma marginale str. Florida 15 15 Yes Anaplasma centrale str. Israel 15 15 Yes Orientia tsutsugamushi str. Boryong 13 13 Yes Rickettsia bellii OSU 85-389 13 13 Yes Rickettsia canadensis str. McKiel 10 10 Yes Rickettsia typhi str. Wilmington 10 10 Yes Rickettsia prowazekii str. BuV67-CWPP 11 11 Yes Rickettsia philipii str. 364D 12 12 Yes Rickettsia heilongjiangensis 054 12 12 Yes Rickettsia peacockii str. Rustic 10 10 Yes Rickettsia felis URRWXCal2 12 12 Yes Rickettsia slovaca 13-B 12 12 Yes Rickettsia parkeri str. Portsmouth 13 13 Yes Rickettsia massiliae MTU5 14 14 Yes Rickettsia japonica YH 12 12 Yes Rickettsia africae ESF-5 12 12 Yes Rickettsia rhipicephali str. 3-7-female6-CWPP 12 12 Yes Rickettsia montanensis str. OSU 85-930 12 12 Yes Candidatus Rickettsia amblyommii str. GAT-30V 13 13 Yes Rickettsia australis str. Cutlack 12 12 Yes Rickettsia akari str. Hartford 12 12 Yes Rickettsia rickettsii str. 'Sheila Smith' 12 12 Yes Rickettsia conorii str. Malish 7 12 12 Yes Starkeya novella DSM 506 42 42 Yes Xanthobacter autotrophicus Py2 61 60 Yes Azorhizobium caulinodans ORS 571 49 49 Yes Methylobacterium chloromethanicum CM4 53 53 Yes Methylobacterium extorquens AM1 70 70 Yes Methylobacterium sp. 4-46 59 59 Yes Methylobacterium populi BJ001 60 60 Yes Methylobacterium nodulans ORS 2060 63 63 Yes Methylobacterium radiotolerans JCM 2831 59 59 Yes Parvibaculum lavamentivorans DS-1 59 58 Yes Ochrobactrum anthropi ATCC 49188 48 48 Yes Brucella microti CCM 4915 29 29 Yes Brucella pinnipedialis B2/94 28 28 Yes Brucella canis ATCC 23365 29 29 Yes Brucella suis ATCC 23445 28 28 Yes Brucella melitensis ATCC 23457 27 27 Yes Brucella ovis ATCC 25840 27 27 Yes Brucella abortus S19 28 28 Yes Sinorhizobium fredii NGR234 59 59 Yes Sinorhizobium medicae WSM419 53 52 Yes Sinorhizobium meliloti AK83 61 60 Yes Genome sequence of Rhizobium sp. strain IRBG74 41 41 Yes Rhizobium etli CIAT 652 55 55 Yes Rhizobium leguminosarum bv. viciae 3841 62 62 Yes Agrobacterium tumefaciens str. C58 37 37 Yes Agrobacterium radiobacter K84 51 50 Yes Agrobacterium sp. H13-3 40 40 Yes Agrobacterium vitis S4 41 41 Yes Candidatus Liberibacter asiaticus str. psy62 8 8 Yes Mesorhizobium sp. BNC1 39 39 Yes Mesorhizobium opportunistum WSM2075 54 54 Yes Mesorhizobium ciceri biovar biserrulae WSM1271 50 50 Yes Mesorhizobium loti MAFF303099 52 52 Yes Methylocella silvestris BL2 42 42 Yes Beijerinckia indica subsp. indica ATCC 9039 48 48 Yes Pelagibacterium halotolerans B2 43 43 Yes Rhodomicrobium vannielii ATCC 17100 36 36 Yes Hyphomicrobium sp. MC1 47 46 Yes Hyphomicrobium denitrificans ATCC 51888 37 37 Yes Oligotropha carboxidovorans OM4 43 43 Yes Rhodopseudomonas palustris BisA53 46 46 Yes Nitrobacter winogradskyi Nb-255 33 33 Yes Nitrobacter hamburgensis X14 35 35 Yes Bradyrhizobium japonicum USDA 110 73 73 Yes Bradyrhizobium sp. ORS 278 83 83 Yes Methylocystis sp. SC2 50 50 Yes Bartonella tribocorum CIP 105476 13 13 Yes Bartonella clarridgeiae 73 13 13 Yes Bartonella henselae str. Houston-1 13 13 Yes Bartonella grahamii as4aup 13 13 Yes Bartonella quintana str. Toulouse 12 12 Yes Bartonella bacilliformis KC583 13 13 Yes Saccharophagus degradans 2-40 46 45 Yes Teredinibacter turnerae T7901 44 43 Yes Cellvibrio japonicus Ueda107 33 31 Yes Aggregatibacter aphrophilus NJ8700 19 19 Yes Aggregatibacter actinomycetemcomitans D7S-1 21 21 Yes Haemophilus somnus 129PT 15 15 Yes Gallibacterium anatis UMN179 18 18 Yes Pasteurella multocida subsp. multocida str. 3480 21 21 Yes Haemophilus parasuis SH0165 19 19 Yes Haemophilus ducreyi 35000HP 15 15 Yes Haemophilus parainfluenzae T3T1 22 22 Yes Haemophilus influenzae PittEE 20 20 Yes Actinobacillus succinogenes 130Z 25 25 Yes Actinobacillus pleuropneumoniae serovar 5b str. L20 21 21 Yes Oceanimonas sp. GK1 38 37 Yes Tolumonas auensis DSM 9187 27 26 Yes Aeromonas veronii B565 40 39 Yes Aeromonas salmonicida subsp. salmonicida A449 45 44 Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966 46 45 Yes Aliivibrio salmonicida LFI1238 35 35 Yes Vibrio fischeri MJ11 36 36 Yes Vibrio sp. Ex25 40 39 Yes Vibrio harveyi ATCC BAA-1116 43 42 Yes Vibrio parahaemolyticus RIMD 2210633 43 42 Yes Vibrio splendidus LGP32 51 50 Yes Vibrio anguillarum 775 28 28 Yes Vibrio furnissii NCTC 11218 41 39 Yes Vibrio vulnificus MO6-24/O 37 36 Yes Vibrio cholerae O395 30 30 Yes Photobacterium profundum SS9 47 47 Yes Psychromonas ingrahamii 37 40 40 Yes Psychromonas sp. CNPT3 23 23 Yes Idiomarina loihiensis L2TR 33 33 Yes Ferrimonas balearica DSM 9799 35 35 Yes Shewanella piezotolerans WP3 55 53 Yes Shewanella loihica PV-4 48 47 Yes Shewanella halifaxensis HAW-EB4 48 47 Yes Shewanella sediminis HAW-EB3 49 48 Yes Shewanella denitrificans OS217 36 35 Yes Shewanella pealeana ATCC 700345 47 46 Yes Shewanella oneidensis MR-1 47 46 Yes Shewanella baltica OS185 53 51 Yes Shewanella woodyi ATCC 51908 63 61 Yes Shewanella sp. MR-4 50 48 Yes Shewanella amazonensis SB2B 49 47 Yes Shewanella violacea DSS12 49 48 Yes Shewanella frigidimarina NCIMB 400 53 52 Yes Shewanella putrefaciens CN-32 50 49 Yes Colwellia psychrerythraea 34H 72 68 Yes Pseudoalteromonas sp. SM9913 42 41 Yes Pseudoalteromonas atlantica T6c 51 50 Yes Pseudoalteromonas haloplanktis TAC125 45 44 Yes Glaciecola sp. 4H-3-7+YE-5 58 57 Yes Glaciecola nitratireducens FR1064 48 47 Yes Marinobacter adhaerens HP15 55 53 Yes Marinobacter sp. BSs20148 46 45 Yes Marinobacter hydrocarbonoclasticus ATCC 49840 47 45 Yes Marinobacter aquaeolei VT8 52 50 Yes Alteromonas sp. SN2 51 50 Yes Alteromonas macleodii str. 'Deep ecotype' 41 40 Yes Kangiella koreensis DSM 16069 38 37 Yes Hahella chejuensis KCTC 2396 60 57 Yes Alcanivorax borkumensis SK2 39 36 Yes Marinomonas posidonica IVIA-Po-181 37 36 Yes Marinomonas sp. MWYL1 41 40 Yes Marinomonas mediterranea MMB-1 41 40 Yes Candidatus Carsonella ruddii PV 2 2 Yes Chromohalobacter salexigens DSM 3043 33 33 Yes Halomonas elongata DSM 2581 38 37 Yes Methylomicrobium alcaliphilum 34 34 Yes Methylomonas methanica MC09 48 48 Yes Methylococcus capsulatus str. Bath 42 42 Yes Dichelobacter nodosus VCS1703A 13 12 Yes Rhodanobacter denitrificans 63 62 Yes Frateuria aurantia DSM 6220 37 36 Yes Pseudoxanthomonas spadix BD-a59 49 48 Yes Pseudoxanthomonas suwonensis 11-1 47 46 Yes Stenotrophomonas maltophilia K279a 56 55 Yes Xylella fastidiosa M23 26 25 Yes Xanthomonas axonopodis pv. citri str. 306 50 49 Yes Xanthomonas albilineans GPE PC73 36 35 Yes Xanthomonas oryzae pv. oryzae PXO99A 43 42 Yes Xanthomonas campestris pv. campestris str. B100 48 47 Yes Halothiobacillus neapolitanus c2 42 42 Yes Spiribacter sp. UAH-SP71 26 26 Yes Alkalilimnicola ehrlichii MLHE-1 35 35 Yes Thioalkalivibrio sulfidophilus HL-EbGr7 51 50 Yes Thioalkalivibrio sp. K90mix 42 41 Yes Halorhodospira halophila SL1 24 24 Yes Allochromatium vinosum DSM 180 36 35 Yes Thiocystis violascens DSM 198 40 39 Yes Nitrosococcus watsonii C-113 32 32 Yes Nitrosococcus halophilus Nc4 32 32 Yes Nitrosococcus oceani ATCC 19707 35 35 Yes Coxiella burnetii Dugway 5J108-111 15 15 Yes Legionella longbeachae NSW150 34 34 Yes Legionella pneumophila str. Corby 28 28 Yes Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 5 5 Yes gamma proteobacterium HdN1 33 30 Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 19 19 Yes Candidatus Vesicomyosocius okutanii HA 19 19 Yes Photorhabdus asymbiotica 19 19 Yes Photorhabdus luminescens subsp. laumondii TTO1 20 20 Yes Xenorhabdus bovienii SS-2004 17 17 Yes Xenorhabdus nematophila ATCC 19061 19 19 Yes Providencia stuartii MRSN 2154 33 32 Yes Proteus mirabilis HI4320 27 26 Yes Edwardsiella ictaluri 93-146 26 26 Yes Edwardsiella tarda EIB202 25 25 Yes Rahnella sp. Y9602 40 40 Yes Rahnella aquatilis CIP 78.65 = ATCC 33071 42 42 Yes Yersinia pseudotuberculosis IP 31758 28 28 Yes Yersinia pestis Pestoides F 29 29 Yes Yersinia enterocolitica subsp. enterocolitica 8081 34 34 Yes Serratia sp. AS12 46 46 Yes Serratia symbiotica str. 'Cinara cedri' 3 3 Yes Serratia sp. ATCC 39006 36 35 Yes Serratia plymuthica AS9 46 46 Yes Serratia proteamaculans 568 41 41 Yes Dickeya dadantii Ech703 33 32 Yes Dickeya zeae Ech1591 36 35 Yes Pectobacterium wasabiae WPP163 37 36 Yes Pectobacterium sp. SCC3193 42 41 Yes Pectobacterium atrosepticum SCRI1043 39 38 Yes Pectobacterium carotovorum subsp. carotovorum PC1 38 37 Yes Sodalis glossinidius str. 'morsitans' 22 22 Yes Halyomorpha halys symbiont 5 5 Yes Pantoea sp. At-9b 46 45 Yes Pantoea vagans C9-1 40 39 Yes Pantoea ananatis LMG 20103 36 35 Yes Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 5 5 Yes Buchnera aphidicola BCc 4 4 Yes Erwinia tasmaniensis Et1/99 33 33 Yes Erwinia sp. Ejp617 27 27 Yes Erwinia billingiae Eb661 42 42 Yes Erwinia pyrifoliae Ep1/96 27 27 Yes Erwinia amylovora ATCC 49946 28 28 Yes Escherichia blattae DSM 4481 33 32 Yes Candidatus Moranella endobia PCIT 4 4 Yes Cronobacter turicensis z3032 36 35 Yes Cronobacter sakazakii ES15 30 29 Yes Candidatus Riesia pediculicola USDA 3 3 Yes secondary endosymbiont of Ctenarytaina eucalypti 6 6 Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 11 11 Yes Candidatus Blochmannia floridanus 6 6 Yes Enterobacteriaceae bacterium strain FGI 57 39 38 Yes Shigella sonnei Ss046 32 31 Yes Shigella flexneri 5 str. 8401 32 31 Yes Shigella dysenteriae Sd197 32 31 Yes Shigella boydii CDC 3083-94 34 33 Yes Salmonella bongori NCTC 12419 43 42 Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 41 40 Yes Klebsiella oxytoca E718 51 50 Yes Klebsiella variicola At-22 46 45 Yes Klebsiella pneumoniae NTUH-K2044 47 46 Yes Enterobacter aerogenes KCTC 2190 43 42 Yes Escherichia fergusonii ATCC 35469 35 34 Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG' 32 31 Yes Enterobacter sp. R4-368 42 41 Yes Enterobacter sp. 638 39 38 Yes Enterobacter asburiae LF7a 45 44 Yes Enterobacter cloacae subsp. dissolvens SDM 39 38 Yes Citrobacter rodentium ICC168 35 34 Yes Citrobacter koseri ATCC BAA-895 37 36 Yes Azotobacter vinelandii DJ 50 49 Yes Pseudomonas sp. TKP 61 60 Yes Pseudomonas sp. UW4 66 65 Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421 57 56 Yes Pseudomonas entomophila L48 60 59 Yes Pseudomonas syringae pv. tomato str. DC3000 51 50 Yes Pseudomonas stutzeri A1501 54 52 Yes Pseudomonas fulva 12-X 49 48 Yes Pseudomonas putida F1 63 62 Yes Pseudomonas protegens Pf-5 60 59 Yes Pseudomonas fluorescens SBW25 58 57 Yes Pseudomonas mendocina ymp 47 46 Yes Pseudomonas aeruginosa UCBPP-PA14 61 60 Yes Pseudomonas sp. VLB120 64 63 Yes Psychrobacter sp. G 34 33 Yes Psychrobacter sp. PRwf-1 32 31 Yes Psychrobacter arcticus 273-4 26 25 Yes Psychrobacter cryohalolentis K5 36 35 Yes Moraxella catarrhalis RH4 23 22 Yes Acinetobacter oleivorans DR1 42 39 Yes Acinetobacter calcoaceticus PHEA-2 39 36 Yes Acinetobacter baumannii ATCC 17978 37 35 Yes Acinetobacter sp. ADP1 37 34 Yes Methylophaga sp. JAM1 34 33 Yes Cycloclasticus sp. P1 36 36 Yes Thiomicrospira crunogena XCL-2 35 35 Yes Thioalkalimicrobium cyclicum ALM1 25 25 Yes Francisella noatunensis subsp. orientalis str. Toba 04 21 21 Yes Francisella sp. TX077308 21 21 Yes Francisella philomiragia subsp. philomiragia ATCC 25017 24 24 Yes Francisella tularensis subsp. tularensis WY96-3418 18 18 Yes Francisella cf. novicida 3523 21 21 Yes Francisella novicida U112 22 22 Yes Nanoarchaeum equitans Kin4-M 4 4 Yes Candidatus Caldiarchaeum subterraneum 15 14 Yes Cenarchaeum symbiosum A 13 13 Yes Candidatus Nitrosopumilus sp. AR2 14 14 Yes Nitrosopumilus maritimus SCM1 22 22 Yes Candidatus Korarchaeum cryptofilum OPF8 6 5 Yes Acidilobus saccharovorans 345-15 11 10 Yes Fervidicoccus fontis Kam940 6 5 Yes Pyrolobus fumarii 1A 9 8 Yes Hyperthermus butylicus DSM 5456 9 8 Yes Thermogladius cellulolyticus 1633 5 5 Yes Ignisphaera aggregans DSM 17230 7 6 Yes Aeropyrum pernix K1 18 17 Yes Ignicoccus hospitalis KIN4/I 9 8 Yes Thermosphaera aggregans DSM 11486 7 6 Yes Staphylothermus hellenicus DSM 12710 5 4 Yes Staphylothermus marinus F1 8 7 Yes Desulfurococcus fermentans DSM 16532 6 5 Yes Desulfurococcus kamchatkensis 1221n 5 5 Yes Desulfurococcus mucosus DSM 2162 6 5 Yes Metallosphaera cuprina Ar-4 14 13 Yes Metallosphaera sedula DSM 5348 16 15 Yes Acidianus hospitalis W1 14 13 Yes Sulfolobus tokodaii str. 7 15 14 Yes Sulfolobus islandicus Y.N.15.51 15 14 Yes Sulfolobus solfataricus P2 13 12 Yes Sulfolobus acidocaldarius DSM 639 14 13 Yes Thermofilum sp. 1910b 10 9 Yes Thermofilum pendens Hrk 5 12 11 Yes Vulcanisaeta moutnovskia 768-28 12 11 Yes Vulcanisaeta distributa DSM 14429 12 11 Yes Caldivirga maquilingensis IC-167 12 11 Yes Pyrobaculum sp. 1860 16 15 Yes Pyrobaculum calidifontis JCM 11548 12 11 Yes Pyrobaculum arsenaticum DSM 13514 13 12 Yes Pyrobaculum oguniense TE7 13 12 Yes Thermoproteus neutrophilus V24Sta 10 9 Yes Pyrobaculum aerophilum str. IM2 13 12 Yes Pyrobaculum islandicum DSM 4184 9 8 Yes Thermoproteus uzoniensis 768-20 13 12 Yes Thermoproteus tenax Kra 1 12 11 Yes halophilic archaeon DL31 21 21 Yes Methanocella arvoryzae MRE50 24 24 Yes Methanocella conradii HZ254 14 14 Yes Methanocella paludicola SANAE 24 24 Yes Methanosaeta harundinacea 6Ac 16 16 Yes Methanosaeta thermophila PT 11 11 Yes Methanosaeta concilii GP6 19 19 Yes Methanosalsum zhilinae DSM 4017 9 9 Yes Methanohalobium evestigatum Z-7303 11 11 Yes Methanococcoides burtonii DSM 6242 14 14 Yes Methanosarcina acetivorans C2A 13 13 Yes Methanosarcina mazei Go1 16 16 Yes Methanosarcina barkeri str. Fusaro 19 19 Yes Methanohalophilus mahii DSM 5219 11 11 Yes Methanosphaerula palustris E1-9c 16 16 Yes Methanoregula boonei 6A8 13 13 Yes Methanospirillum hungatei JF-1 21 21 Yes Methanocorpusculum labreanum Z 5 5 Yes Methanoplanus petrolearius DSM 11571 13 13 Yes Methanoculleus bourgensis MS2 13 13 Yes Methanoculleus marisnigri JR1 12 12 Yes Ferroglobus placidus DSM 10642 12 12 Yes Archaeoglobus profundus DSM 5631 8 8 Yes Archaeoglobus veneficus SNP6 9 9 Yes Archaeoglobus fulgidus DSM 4304 12 12 Yes Thermococcus sp. 4557 7 6 Yes Thermococcus onnurineus NA1 10 9 Yes Thermococcus kodakarensis KOD1 10 9 Yes Thermococcus gammatolerans EJ3 5 4 Yes Thermococcus sibiricus MM 739 11 10 Yes Thermococcus barophilus MP 9 8 Yes Pyrococcus sp. ST04 5 4 Yes Pyrococcus yayanosii CH1 9 8 Yes Pyrococcus horikoshii OT3 4 3 Yes Pyrococcus abyssi GE5 4 3 Yes Pyrococcus furiosus COM1 10 9 Yes Thermoplasmatales archaeon BRNA1 3 3 Yes Thermoplasma volcanium GSS1 10 9 Yes Thermoplasma acidophilum DSM 1728 9 8 Yes Picrophilus torridus DSM 9790 10 9 Yes Salinarchaeum sp. Harcht-Bsk1 27 27 Yes Halopiger xanaduensis SH-6 32 32 Yes Haloterrigena turkmenica DSM 5511 34 34 Yes Natrinema sp. J7-2 24 24 Yes Natrialba magadii ATCC 43099 30 30 Yes Halorubrum lacusprofundi ATCC 49239 30 30 Yes Haloquadratum walsbyi DSM 16790 25 25 Yes Halogeometricum borinquense DSM 11551 27 27 Yes Haloferax mediterranei ATCC 33500 29 29 Yes Haloferax volcanii DS2 25 25 Yes Halomicrobium mukohataei DSM 12286 28 28 Yes Halorhabdus utahensis DSM 12940 25 24 Yes Natronomonas pharaonis DSM 2160 25 25 Yes Haloarcula hispanica ATCC 33960 29 29 Yes Haloarcula marismortui ATCC 43049 33 33 Yes Halalkalicoccus jeotgali B3 23 23 Yes Halobacterium salinarum R1 22 22 Yes Halobacterium sp. NRC-1 24 24 Yes Methanotorris igneus Kol 5 5 5 Yes Methanocaldococcus sp. FS406-22 3 3 Yes Methanocaldococcus fervens AG86 3 3 Yes Methanocaldococcus vulcanius M7 3 3 Yes methanocaldococcus infernus ME 4 4 Yes Methanocaldococcus jannaschii DSM 2661 3 3 Yes Methanothermococcus okinawensis IH1 4 4 Yes Methanococcus aeolicus Nankai-3 6 6 Yes Methanococcus maripaludis C5 4 4 Yes Methanococcus voltae A3 2 2 Yes Methanococcus vannielii SB 5 5 Yes Methanothermus fervidus DSM 2088 2 2 Yes Methanothermobacter marburgensis str. Marburg 9 9 Yes Methanothermobacter thermautotrophicus str. Delta H 9 9 Yes Methanosphaera stadtmanae DSM 3091 2 2 Yes Methanobrevibacter sp. AbM4 1 1 Yes Methanobrevibacter ruminantium M1 4 4 Yes Methanobrevibacter smithii ATCC 35061 2 2 Yes Complete genome sequence of Methanobacterium sp. Mb1 5 5 Yes Aciduliprofundum sp. MAR08-339 5 4 Yes Aciduliprofundum boonei T469 5 4 Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 372 293 Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 238 160 Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 143 107 Yes Ascaris suum Victoria/Ghent Pig roundworm 121 95 Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 210 170 Yes Cryptococcus neoformans var. grubii H99 52 47 Yes Cryptococcus neoformans B-3501A 53 49 Yes Cryptococcus neoformans JEC21 50 46 Yes Paracoccidioides brasiliensis Pb01 61 53 Yes Paracoccidioides brasiliensis Pb03 58 50 Yes Coccidioides posadasii str. Silveira 63 55 Yes Coccidioides immitis RMSCC 3703 56 50 Yes Coccidioides immitis RMSCC 2394 63 55 Yes Coccidioides immitis H538.4 55 48 Yes Ajellomyces dermatitidis ER-3 63 55 Yes Histoplasma capsulatum H143 57 49 Yes Histoplasma capsulatum H88 60 53 Yes Histoplasma capsulatum G186AR 63 55 Yes Aspergillus fumigatus A1163 81 73 Yes Candida albicans WO-1 59 53 Yes Saccharomyces cerevisiae UC5 54 45 Yes Saccharomyces cerevisiae PW5 50 42 Yes Saccharomyces cerevisiae FL100 33 28 Yes Saccharomyces cerevisiae CLIB382 7 7 Yes Saccharomyces cerevisiae CLIB324 42 33 Yes Saccharomyces cerevisiae CBS7960 49 40 Yes Saccharomyces cerevisiae YJM269 43 35 Yes Saccharomyces cerevisiae T7 52 44 Yes Saccharomyces cerevisiae FostersB 53 46 Yes Saccharomyces cerevisiae FostersO 45 39 Yes Saccharomyces cerevisiae VL3 56 44 Yes Saccharomyces cerevisiae Vin13 51 43 Yes Saccharomyces cerevisiae LalvinQA23 55 42 Yes Saccharomyces cerevisiae AWRI796 53 45 Yes Saccharomyces cerevisiae Sigma1278b 55 46 Yes Saccharomyces cerevisiae W303 58 47 Yes Saccharomyces cerevisiae JAY291 56 47 Yes Saccharomyces cerevisiae AWRI1631 47 38 Yes Saccharomyces cerevisiae YPS163 29 24 Yes Saccharomyces cerevisiae M22 21 20 Yes Saccharomyces cerevisiae T73 30 26 Yes Saccharomyces cerevisiae CLIB215 45 36 Yes Saccharomyces cerevisiae Y10 25 21 Yes Saccharomyces cerevisiae YJM789 54 45 Yes Saccharomyces cerevisiae YJM789 54 45 Yes Saccharomyces cerevisiae RM11-1a 56 47 Yes Saccharomyces cerevisiae RM11-1a 55 46 Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 55 46 Yes Schizosaccharomyces pombe 972h- 46 37 Yes Batrachochytrium dendrobatidis JEL423 52 44 Yes Batrachochytrium dendrobatidis JAM81 56 48 Yes Theobroma cacao Matina 1-6 v0.9 Cacao 236 205 Yes Hordeum vulgare 22 Domesticated barley 377 334 Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 326 290 Yes Trypanosoma brucei Lister 427 v4.1 61 56 Yes Neospora caninum Nc-Liverpool 6.2 73 48 Yes Plasmodium falciparum HB3 52 44 Yes Plasmodium falciparum Dd2 42 35 Yes Chroococcidiopsis thermalis PCC 7203 54 54 Yes Chamaesiphon minutus PCC 6605 58 58 Yes Synechocystis sp. PCC 6803 substr. PCC-P 35 35 Yes Synechocystis sp. PCC 6803 substr. PCC-N 35 35 Yes Synechocystis sp. PCC 6803 substr. GT-I 35 35 Yes Synechocystis sp. PCC 6803 37 37 Yes Cyanobium gracile PCC 6307 32 32 Yes Dactylococcopsis salina PCC 8305 32 32 Yes Synechococcus sp. JA-2-3B'a(2-13) 27 27 Yes Synechococcus sp. JA-3-3Ab 27 27 Yes Synechococcus sp. CC9902 25 25 Yes Synechococcus sp. RCC307 26 26 Yes Synechococcus sp. CC9605 27 27 Yes Synechococcus sp. WH 8102 26 26 Yes Synechococcus sp. WH 7803 25 25 Yes Synechococcus sp. PCC 7002 34 34 Yes Synechococcus elongatus PCC 6301 28 28 Yes Prochlorococcus marinus str. NATL1A 26 26 Yes Prochlorococcus marinus str. MIT 9301 23 23 Yes Prochlorococcus marinus str. AS9601 23 23 Yes Prochlorococcus marinus subsp. marinus str. CCMP1375 22 22 Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986 22 22 Yes Prochlorococcus marinus str. MIT 9215 22 22 Yes Prochlorococcus marinus str. MIT 9211 23 23 Yes Prochlorococcus marinus str. MIT 9313 25 25 Yes Prochlorococcus marinus str. MIT 9312 22 22 Yes Prochlorococcus marinus str. MIT 9303 24 24 Yes Prochlorococcus marinus str. NATL2A 23 23 Yes Crinalium epipsammum PCC 9333 41 41 Yes Oscillatoria nigro-viridis PCC 7112 52 52 Yes Oscillatoria acuminata PCC 6304 54 54 Yes Arthrospira platensis NIES-39 41 41 Yes Cyanothece sp. PCC 7822 51 51 Yes Cyanothece sp. PCC 7425 48 48 Yes Cyanothece sp. PCC 7424 44 44 Yes Cyanothece sp. ATCC 51142 43 43 Yes Cyanothece sp. PCC 8801 43 43 Yes Cyanobacterium aponinum PCC 10605 35 35 Yes Cyanobacterium stanieri PCC 7202 26 26 Yes Gloeobacter kilaueensis Gloeobacter sp. JS 36 36 Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327 40 40 Yes Stanieria cyanosphaera PCC 7437 42 42 Yes Calothrix parietina Calothrix sp. PCC 6303 53 53 Yes Cylindrospermum stagnale PCC 7417 48 48 Yes Anabaena cylindrica PCC 7122 54 54 Yes Candidatus Phytoplasma solani tobfin_28409 2 2 Yes Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 2 2 Yes Candidatus Phytoplasma australiense 2 2 Yes Mesoplasma florum W37 1 1 Yes Spiroplasma syrphidicola EA-1 4 4 Yes Spiroplasma diminutum CUAS-1 2 2 Yes Spiroplasma chrysopicola DF-1 4 4 Yes Spiroplasma taiwanense CT-1 3 3 Yes Spiroplasma apis B31 3 3 Yes Ureaplasma parvum serovar 3 str. ATCC 700970 3 3 Yes Mycoplasma parvum str. Indiana 1 1 Yes Mycoplasma leachii PG50 2 2 Yes Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 2 2 Yes Mycoplasma mycoides subsp. mycoides SC str. PG1 2 2 Yes Candidatus Mycoplasma haemominutum 'Birmingham 1' 1 1 Yes Mycoplasma ovis str. Michigan 1 1 Yes Mycoplasma cynos C142 2 2 Yes Candidatus Mycoplasma haemolamae str. Purdue 1 1 Yes Mycoplasma suis str. Illinois 1 1 Yes Mycoplasma haemofelis str. Langford 1 1 1 Yes Mycoplasma bovis Hubei-1 3 3 Yes Mycoplasma bovis PG45 3 3 Yes Mycoplasma putrefaciens Mput9231 2 2 Yes Mycoplasma fermentans JER 3 3 Yes Mycoplasma fermentans PG18 3 3 Yes Mycoplasma agalactiae 3 3 Yes Mycoplasma pneumoniae M129-B7 2 2 Yes Mycoplasma pneumoniae FH 1 1 Yes Mycoplasma pneumoniae M129 2 2 Yes Mycoplasma hyorhinis SK76 3 3 Yes Mycoplasma hyorhinis MCLD 3 3 Yes Mycoplasma hyorhinis HUB-1 2 2 Yes Mycoplasma hyorhinis DBS 1050 3 3 Yes Mycoplasma hyopneumoniae 168-L 3 3 Yes Mycoplasma hyopneumoniae 7422 3 3 Yes Mycoplasma hyopneumoniae 232 3 3 Yes Mycoplasma hyopneumoniae 7448 3 3 Yes Mycoplasma hyopneumoniae J 3 3 Yes Mycoplasma genitalium M2321 2 2 Yes Mycoplasma genitalium M2288 2 2 Yes Mycoplasma genitalium M6282 2 2 Yes Mycoplasma genitalium M6320 2 2 Yes Mycoplasma gallisepticum NC08_2008.031-4-3P 3 3 Yes Mycoplasma gallisepticum CA06_2006.052-5-2P 3 3 Yes Mycoplasma gallisepticum NC06_2006.080-5-2P 3 3 Yes Mycoplasma gallisepticum WI01_2001.043-13-2P 3 3 Yes Mycoplasma gallisepticum NY01_2001.047-5-1P 3 3 Yes Mycoplasma gallisepticum NC96_1596-4-2P 3 3 Yes Mycoplasma gallisepticum NC95_13295-2-2P 3 3 Yes Mycoplasma gallisepticum VA94_7994-1-7P 3 3 Yes Mycoplasma gallisepticum S6 3 3 Yes Mycoplasma gallisepticum str. R(high) 3 3 Yes Mycoplasma gallisepticum str. R(low) 3 3 Yes Gordonibacter pamelaeae 7-10-1-b 8 8 Yes Adlercreutzia equolifaciens DSM 19450 7 7 Yes Frankia sp. EuI1c 30 30 Yes Frankia sp. CcI3 16 16 Yes Nocardiopsis alba ATCC BAA-2165 24 24 Yes Streptomyces albus J1074 29 29 Yes Streptomyces rapamycinicus NRRL 5491 37 37 Yes Streptomyces davawensis JCM 4913 30 30 Yes Streptomyces fulvissimus DSM 40593 33 33 Yes Streptomyces venezuelae ATCC 10712 33 33 Yes Streptomyces collinus Tu 365 30 30 Yes Streptomyces cattleya NRRL 8057 = DSM 46488 33 33 Yes Streptomyces hygroscopicus subsp. jinggangensis TL01 31 31 Yes Saccharothrix espanaensis DSM 44229 30 30 Yes Amycolatopsis mediterranei RB 34 34 Yes Amycolatopsis mediterranei S699 34 34 Yes Amycolatopsis mediterranei S699 34 34 Yes Amycolatopsis orientalis HCCB10007 30 30 Yes Propionibacterium avidum 44067 17 16 Yes Propionibacterium acnes ATCC 11828 15 14 Yes Propionibacterium acnes TypeIA2 P.acn31 15 14 Yes Propionibacterium acnes TypeIA2 P.acn17 15 14 Yes Propionibacterium acnes TypeIA2 P.acn33 15 14 Yes Propionibacterium acnes C1 15 14 Yes Propionibacterium acnes HL096PA1 15 14 Yes Propionibacterium acnes 6609 15 14 Yes Propionibacterium acnes 266 14 13 Yes Propionibacterium acnes KPA171202 15 14 Yes Propionibacterium acidipropionici ATCC 4875 24 23 Yes Actinoplanes friuliensis DSM 7358 34 34 Yes Rhodococcus pyridinivorans SB3094 34 32 Yes Rhodococcus erythropolis CCM2595 30 30 Yes Nocardia brasiliensis ATCC 700358 33 33 Yes Mycobacterium sp. MOTT36Y 23 23 Yes Mycobacterium sp. JDM601 23 23 Yes Mycobacterium abscessus subsp. bolletii 50594 31 31 Yes Mycobacterium liflandii 128FXT 32 32 Yes Mycobacterium sp. KMS 31 31 Yes Mycobacterium sp. MCS 26 26 Yes Mycobacterium yongonense 05-1390 24 24 Yes Mycobacterium intracellulare MOTT-64 24 24 Yes Mycobacterium indicus pranii MTCC 9506 26 26 Yes Mycobacterium intracellulare MOTT-02 24 24 Yes Mycobacterium avium subsp. paratuberculosis MAP4 22 22 Yes Mycobacterium avium subsp. paratuberculosis K-10 22 22 Yes Mycobacterium canettii CIPT 140070017 26 26 Yes Mycobacterium canettii CIPT 140060008 26 26 Yes Mycobacterium canettii CIPT 140070008 26 26 Yes Mycobacterium canettii CIPT 140070010 26 26 Yes Mycobacterium tuberculosis EAI5/NITR206 26 26 Yes Mycobacterium tuberculosis EAI5 26 26 Yes Mycobacterium tuberculosis CAS/NITR204 23 23 Yes Mycobacterium tuberculosis str. Beijing/NITR203 26 26 Yes Mycobacterium tuberculosis UT205 26 26 Yes Mycobacterium tuberculosis RGTB423 22 22 Yes Mycobacterium tuberculosis RGTB327 25 25 Yes Mycobacterium tuberculosis CTRI-2 26 26 Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801 26 26 Yes Mycobacterium tuberculosis KZN 605 26 26 Yes Mycobacterium tuberculosis KZN 4207 26 26 Yes Mycobacterium tuberculosis CCDC5180 23 23 Yes Mycobacterium tuberculosis CCDC5079 26 26 Yes Mycobacterium tuberculosis CCDC5079 26 26 Yes Mycobacterium tuberculosis H37Ra 25 25 Yes Mycobacterium tuberculosis str. Haarlem/NITR202 22 22 Yes Mycobacterium tuberculosis str. Haarlem 26 26 Yes Mycobacterium tuberculosis F11 26 26 Yes Mycobacterium tuberculosis H37Rv 26 26 Yes Mycobacterium tuberculosis CDC1551 25 25 Yes Mycobacterium bovis AF2122/97 26 26 Yes Mycobacterium bovis BCG str. Korea 1168P 26 26 Yes Mycobacterium bovis BCG str. Mexico 26 26 Yes Mycobacterium bovis BCG str. Tokyo 172 26 26 Yes Mycobacterium gilvum Spyr1 30 30 Yes Mycobacterium smegmatis str. MC2 155 31 31 Yes Mycobacterium leprae TN 13 13 Yes Mycobacterium kansasii ATCC 12478 39 39 Yes Corynebacterium maris DSM 45190 19 19 Yes Corynebacterium halotolerans YIM 70093 = DSM 44683 22 22 Yes Corynebacterium terpenotabidum Y-11 17 17 Yes Corynebacterium ulcerans BR-AD22 19 19 Yes Corynebacterium ulcerans 809 19 19 Yes Corynebacterium urealyticum DSM 7111 13 12 Yes Corynebacterium argentoratense DSM 44202 17 17 Yes Corynebacterium callunae DSM 20147 20 20 Yes Corynebacterium pseudotuberculosis 258 18 18 Yes Corynebacterium pseudotuberculosis Cp162 17 17 Yes Corynebacterium pseudotuberculosis P54B96 18 18 Yes Corynebacterium pseudotuberculosis 267 18 18 Yes Corynebacterium pseudotuberculosis 1/06-A 18 18 Yes Corynebacterium pseudotuberculosis 42/02-A 18 18 Yes Corynebacterium pseudotuberculosis 3/99-5 18 18 Yes Corynebacterium pseudotuberculosis 31 18 18 Yes Corynebacterium pseudotuberculosis CIP 52.97 18 18 Yes Corynebacterium pseudotuberculosis PAT10 18 18 Yes Corynebacterium pseudotuberculosis I19 18 18 Yes Corynebacterium pseudotuberculosis FRC41 18 18 Yes Corynebacterium pseudotuberculosis C231 17 17 Yes Corynebacterium pseudotuberculosis 1002 18 18 Yes Corynebacterium glutamicum MB001 22 22 Yes Corynebacterium glutamicum SCgG2 21 21 Yes Corynebacterium glutamicum SCgG1 21 21 Yes Corynebacterium glutamicum ATCC 13032 23 23 Yes Corynebacterium glutamicum ATCC 13032 23 23 Yes Corynebacterium glutamicum ATCC 13032 23 23 Yes Corynebacterium diphtheriae BH8 21 21 Yes Corynebacterium diphtheriae INCA 402 19 19 Yes Corynebacterium diphtheriae VA01 19 19 Yes Corynebacterium diphtheriae HC04 19 19 Yes Corynebacterium diphtheriae HC03 19 19 Yes Corynebacterium diphtheriae HC02 21 21 Yes Corynebacterium diphtheriae HC01 19 19 Yes Corynebacterium diphtheriae 241 19 19 Yes Corynebacterium diphtheriae CDCE 8392 19 19 Yes Corynebacterium diphtheriae PW8 21 21 Yes Corynebacterium diphtheriae C7 (beta) 20 20 Yes Corynebacterium diphtheriae 31A 20 20 Yes Tropheryma whipplei str. Twist 5 5 Yes Leifsonia xyli subsp. cynodontis DSM 46306 16 16 Yes Clavibacter michiganensis subsp. sepedonicus 15 15 Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 17 17 Yes Gardnerella vaginalis HMP9231 9 8 Yes Gardnerella vaginalis ATCC 14019 8 7 Yes Bifidobacterium longum NCC2705 9 8 Yes Bifidobacterium longum DJO10A 10 9 Yes Bifidobacterium longum subsp. infantis 157F 9 8 Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 10 9 Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 10 9 Yes Bifidobacterium longum subsp. longum KACC 91563 9 8 Yes Bifidobacterium longum subsp. longum BBMN68 10 9 Yes Bifidobacterium longum subsp. longum F8 8 7 Yes Bifidobacterium longum subsp. longum JCM 1217 9 8 Yes Bifidobacterium thermophilum RBL67 9 8 Yes Bifidobacterium animalis subsp. animalis ATCC 25527 8 7 Yes Bifidobacterium animalis subsp. lactis Bl12 8 7 Yes Bifidobacterium animalis subsp. lactis B420 8 7 Yes Bifidobacterium animalis subsp. lactis ATCC 27673 8 7 Yes Bifidobacterium animalis subsp. lactis BLC1 8 7 Yes Bifidobacterium animalis subsp. lactis CNCM I-2494 7 6 Yes Bifidobacterium animalis subsp. lactis Bi-07 8 7 Yes Bifidobacterium animalis subsp. lactis V9 8 7 Yes Bifidobacterium animalis subsp. lactis DSM 10140 8 7 Yes Bifidobacterium animalis subsp. lactis BB-12 6 5 Yes Bifidobacterium animalis subsp. lactis AD011 8 7 Yes Bifidobacterium breve UCC2003 9 8 Yes Bifidobacterium asteroides PRL2011 9 8 Yes Bifidobacterium bifidum PRL2010 9 8 Yes Bifidobacterium bifidum BGN4 9 8 Yes Actinomyces graevenitzii C83 9 9 Yes Actinomyces odontolyticus ATCC 17982 9 9 Yes Actinomyces viscosus C505 12 12 Yes Dehalococcoides mccartyi GY50 11 11 Yes Dehalococcoides mccartyi DCMB5 11 11 Yes Dehalococcoides mccartyi BTF08 11 11 Yes Dehalococcoides sp. GT 11 11 Yes Dehalococcoides sp. VS 11 11 Yes Dehalococcoides sp. CBDB1 11 11 Yes Chthonomonas calidirosea T49 34 34 Yes Deinococcus peraridilitoris DSM 19664 26 26 Yes Thermus oshimai JL-2 18 17 Yes Thermus thermophilus JL-18 21 20 Yes Thermus thermophilus SG0.5JP17-16 23 22 Yes Thermus thermophilus HB8 20 19 Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87 3 3 Yes Erysipelothrix rhusiopathiae SY1027 9 9 Yes Eubacterium siraeum V10Sc8a 5 5 Yes Clostridium thermocellum DSM 1313 17 16 Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 15 14 Yes Faecalibacterium prausnitzii L2-6 7 6 Yes Ruminococcus champanellensis 18P13 6 6 Yes Sulfobacillus acidophilus TPY 27 26 Yes Clostridium acidurici 9a 16 16 Yes Desulfosporosinus meridiei DSM 13257 23 23 Yes Desulfitobacterium dichloroeliminans LMG P-21439 16 16 Yes Desulfitobacterium hafniense DCB-2 21 20 Yes Desulfotomaculum gibsoniae DSM 7213 23 23 Yes Clostridium difficile BI1 13 13 Yes Clostridium difficile R20291 13 13 Yes Clostridium difficile CD196 12 12 Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 9 8 Yes Coprococcus catus GD/7 10 10 Yes Roseburia intestinalis XB6B4 5 5 Yes Candidatus Arthromitus sp. SFB-rat-Yit 3 3 Yes Candidatus Arthromitus sp. SFB-mouse-Yit 3 3 Yes Clostridium sp. SY8519 12 12 Yes Clostridium saccharobutylicum DSM 13864 8 8 Yes Clostridium autoethanogenum DSM 10061 10 10 Yes Clostridium saccharoperbutylacetonicum N1-4(HMT) 24 22 Yes Clostridium kluyveri NBRC 12016 11 10 Yes Clostridium tetani genome 12124569 10 10 Yes Clostridium perfringens SM101 10 10 Yes Clostridium perfringens str. 13 15 14 Yes Clostridium pasteurianum BC1 12 12 Yes Clostridium botulinum H04402 065 13 13 Yes Clostridium botulinum BKT015925 6 6 Yes Clostridium botulinum F str. 230613 14 14 Yes Clostridium botulinum F str. Langeland 14 14 Yes Clostridium botulinum E3 str. Alaska E43 16 16 Yes Clostridium botulinum B1 str. Okra 14 14 Yes Clostridium botulinum Ba4 str. 657 14 14 Yes Clostridium botulinum A2 str. Kyoto 14 14 Yes Clostridium botulinum A3 str. Loch Maree 14 14 Yes Clostridium botulinum A str. Hall 14 14 Yes Clostridium botulinum A str. ATCC 19397 14 14 Yes Clostridium acetobutylicum DSM 1731 12 12 Yes Clostridium acetobutylicum EA 2018 12 12 Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485 16 15 Yes Thermoanaerobacterium thermosaccharolyticum M0795 15 14 Yes Thermacetogenium phaeum DSM 12270 15 15 Yes Thermoanaerobacter sp. X513 16 14 Yes Halobacteroides halobius DSM 5150 18 18 Yes Carnobacterium maltaromaticum LMA28 13 13 Yes Melissococcus plutonius ATCC 35311 11 10 Yes Enterococcus mundtii QU 25 13 13 Yes Enterococcus casseliflavus EC20 14 13 Yes Enterococcus faecium Aus0085 18 17 Yes Enterococcus faecium NRRL B-2354 16 15 Yes Enterococcus faecium DO 18 17 Yes Enterococcus faecalis str. Symbioflor 1 16 15 Yes Enterococcus faecalis D32 15 14 Yes Enterococcus faecalis OG1RF 16 15 Yes Enterococcus faecalis V583 21 20 Yes Leuconostoc carnosum JB16 14 13 Yes Leuconostoc mesenteroides subsp. mesenteroides J18 18 17 Yes Leuconostoc gelidum JB7 9 8 Yes Lactobacillus paracasei subsp. paracasei 8700:2 15 15 Yes Lactobacillus casei LOCK919 13 13 Yes Lactobacillus casei W56 15 15 Yes Lactobacillus casei LC2W 14 14 Yes Lactobacillus casei BD-II 15 15 Yes Lactobacillus casei BL23 15 15 Yes Lactobacillus casei str. Zhang 13 13 Yes Lactobacillus rhamnosus LOCK908 10 10 Yes Lactobacillus rhamnosus LOCK900 10 10 Yes Lactobacillus rhamnosus ATCC 8530 11 11 Yes Lactobacillus rhamnosus GG 11 11 Yes Lactobacillus rhamnosus GG 11 11 Yes Lactobacillus johnsonii N6.2 8 8 Yes Lactobacillus johnsonii DPC 6026 8 8 Yes Lactobacillus johnsonii NCC 533 8 8 Yes Lactobacillus salivarius UCC118 11 11 Yes Lactobacillus fermentum F-6 13 12 Yes Lactobacillus fermentum CECT 5716 4 3 Yes Lactobacillus amylovorus GRL 1112 5 5 Yes Lactobacillus reuteri TD1 12 11 Yes Lactobacillus reuteri I5007 11 10 Yes Lactobacillus reuteri JCM 1112 10 9 Yes Lactobacillus reuteri SD2112 11 10 Yes Lactobacillus plantarum 16 16 16 Yes Lactobacillus plantarum ZJ316 13 13 Yes Lactobacillus plantarum subsp. plantarum ST-III 13 13 Yes Lactobacillus plantarum subsp. plantarum P-8 13 13 Yes Lactobacillus plantarum WCFS1 15 15 Yes Lactobacillus helveticus R0052 8 8 Yes Lactobacillus helveticus H10 7 7 Yes Lactobacillus helveticus CNRZ32 6 6 Yes Lactobacillus delbrueckii subsp. bulgaricus ND02 6 6 Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 6 6 Yes Lactobacillus delbrueckii subsp. bulgaricus 2038 6 6 Yes Lactobacillus brevis KB290 17 17 Yes Lactobacillus acidophilus La-14 9 9 Yes Lactobacillus acidophilus NCFM 9 9 Yes Pediococcus pentosaceus SL4 9 9 Yes Lactococcus garvieae Lg2 19 18 Yes Lactococcus lactis subsp. lactis KLDS 4.0325 16 15 Yes Lactococcus lactis subsp. lactis IO-1 16 15 Yes Lactococcus lactis subsp. lactis CV56 18 17 Yes Lactococcus lactis subsp. lactis KF147 16 15 Yes Lactococcus lactis subsp. lactis Il1403 16 15 Yes Lactococcus lactis subsp. cremoris KW2 17 16 Yes Lactococcus lactis subsp. cremoris UC509.9 16 15 Yes Lactococcus lactis subsp. cremoris A76 15 14 Yes Lactococcus lactis subsp. cremoris NZ9000 16 15 Yes Lactococcus lactis subsp. cremoris SK11 16 15 Yes Streptococcus constellatus subsp. pharyngis C1050 14 13 Yes Streptococcus constellatus subsp. pharyngis C818 14 13 Yes Streptococcus constellatus subsp. pharyngis C232 14 13 Yes Streptococcus intermedius B196 15 14 Yes Streptococcus intermedius C270 16 15 Yes Streptococcus anginosus C238 14 13 Yes Streptococcus anginosus C1051 18 17 Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 16 15 Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 17 16 Yes Streptococcus lutetiensis 033 11 11 Yes Streptococcus equi subsp. zooepidemicus ATCC 35246 12 11 Yes Streptococcus equi subsp. zooepidemicus MGCS10565 13 13 Yes Streptococcus equi subsp. zooepidemicus 13 12 Yes Streptococcus dysgalactiae subsp. equisimilis 167 17 16 Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713 18 17 Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 17 16 Yes Streptococcus dysgalactiae subsp. equisimilis RE378 17 16 Yes Streptococcus oligofermentans AS 1.3089 12 12 Yes Streptococcus iniae SF1 15 14 Yes Streptococcus parasanguinis FW213 13 13 Yes Streptococcus pyogenes HSC5 13 12 Yes Streptococcus pyogenes A20 13 12 Yes Streptococcus pyogenes MGAS1882 13 12 Yes Streptococcus pyogenes MGAS15252 13 12 Yes Streptococcus pyogenes Alab49 13 12 Yes Streptococcus pyogenes MGAS10750 13 12 Yes Streptococcus pyogenes MGAS10270 14 13 Yes Streptococcus pyogenes MGAS2096 13 12 Yes Streptococcus pyogenes MGAS9429 13 12 Yes Streptococcus pyogenes MGAS6180 14 13 Yes Streptococcus pyogenes NZ131 13 12 Yes Streptococcus pyogenes MGAS8232 13 12 Yes Streptococcus pyogenes MGAS10394 13 12 Yes Streptococcus pyogenes MGAS315 13 12 Yes Streptococcus pyogenes SSI-1 13 12 Yes Streptococcus pyogenes M1 476 12 11 Yes Streptococcus pyogenes MGAS5005 13 12 Yes Streptococcus pyogenes M1 GAS 12 11 Yes Streptococcus pneumoniae A026 12 12 Yes Streptococcus pneumoniae ST556 12 12 Yes Streptococcus pneumoniae SPNA45 12 12 Yes Streptococcus pneumoniae SPN994039 13 13 Yes Streptococcus pneumoniae SPN994038 13 13 Yes Streptococcus pneumoniae SPN034183 13 13 Yes Streptococcus pneumoniae SPN034156 13 13 Yes Streptococcus pneumoniae INV104 12 12 Yes Streptococcus pneumoniae INV200 12 12 Yes Streptococcus pneumoniae OXC141 13 13 Yes Streptococcus pneumoniae gamPNI0373 13 13 Yes Streptococcus pneumoniae AP200 13 13 Yes Streptococcus pneumoniae ATCC 700669 13 13 Yes Streptococcus pneumoniae TCH8431/19A 12 12 Yes Streptococcus pneumoniae CGSP14 12 12 Yes Streptococcus pneumoniae G54 12 12 Yes Streptococcus pneumoniae JJA 12 12 Yes Streptococcus pneumoniae 70585 13 13 Yes Streptococcus pneumoniae Hungary19A-6 13 13 Yes Streptococcus pneumoniae Taiwan19F-14 12 12 Yes Streptococcus pneumoniae D39 12 12 Yes Streptococcus pneumoniae 670-6B 12 12 Yes Streptococcus pneumoniae R6 12 12 Yes Streptococcus pneumoniae TIGR4 12 12 Yes Streptococcus agalactiae ILRI112 14 13 Yes Streptococcus agalactiae ILRI005 15 14 Yes Streptococcus agalactiae 09mas018883 15 14 Yes Streptococcus agalactiae 2-22 14 13 Yes Streptococcus agalactiae SA20-06 14 13 Yes Streptococcus agalactiae GD201008-001 15 14 Yes Streptococcus agalactiae NEM316 18 17 Yes Streptococcus agalactiae 2603V/R 15 14 Yes Streptococcus mutans GS-5 14 13 Yes Streptococcus mutans LJ23 17 16 Yes Streptococcus mutans UA159 14 13 Yes Streptococcus thermophilus MN-ZLW-002 10 10 Yes Streptococcus thermophilus JIM 8232 13 12 Yes Streptococcus thermophilus ND03 10 10 Yes Streptococcus thermophilus CNRZ1066 9 9 Yes Streptococcus thermophilus LMG 18311 10 10 Yes Streptococcus suis T15 14 14 Yes Streptococcus suis TL13 15 15 Yes Streptococcus suis SC070731 14 14 Yes Streptococcus suis S735 14 14 Yes Streptococcus suis ST3 14 14 Yes Streptococcus suis D9 14 14 Yes Streptococcus suis SS12 14 14 Yes Streptococcus suis D12 15 15 Yes Streptococcus suis ST1 15 15 Yes Streptococcus suis A7 14 14 Yes Streptococcus suis JS14 12 12 Yes Streptococcus suis BM407 13 13 Yes Streptococcus suis SC84 13 13 Yes Streptococcus suis GZ1 13 13 Yes Streptococcus suis 98HAH33 13 13 Yes Streptococcus suis 05ZYH33 14 14 Yes Streptococcus salivarius CCHSS3 14 13 Yes Streptococcus salivarius JIM8777 14 13 Yes Exiguobacterium antarcticum B7 26 25 Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 19 17 Yes Thermobacillus composti KWC4 22 21 Yes Paenibacillus sp. Y412MC10 26 26 Yes Paenibacillus mucilaginosus KNP414 26 26 Yes Paenibacillus mucilaginosus K02 27 27 Yes Paenibacillus larvae subsp. larvae DSM 25430 21 20 Yes Paenibacillus polymyxa CR1 26 26 Yes Paenibacillus polymyxa SC2 25 25 Yes Paenibacillus polymyxa E681 22 22 Yes Listeria monocytogenes EGD sequence 15 15 Yes Listeria monocytogenes N53-1 14 14 Yes Listeria monocytogenes La111 15 15 Yes Listeria monocytogenes serotype 4b str. LL195 15 15 Yes Listeria monocytogenes 07PF0776 15 15 Yes Listeria monocytogenes M7 15 15 Yes Listeria monocytogenes J1-220 14 14 Yes Listeria monocytogenes J1816 15 15 Yes Listeria monocytogenes SLCC2376 15 15 Yes Listeria monocytogenes SLCC5850 16 16 Yes Listeria monocytogenes ATCC 19117 15 15 Yes Listeria monocytogenes L312 15 15 Yes Listeria monocytogenes SLCC2479 15 15 Yes Listeria monocytogenes SLCC7179 15 15 Yes Listeria monocytogenes SLCC2540 17 17 Yes Listeria monocytogenes SLCC2378 15 15 Yes Listeria monocytogenes serotype 1/2b str. SLCC2755 15 15 Yes Listeria monocytogenes serotype 1/2c str. SLCC2372 15 15 Yes Listeria monocytogenes serotype 7 str. SLCC2482 15 15 Yes Listeria monocytogenes 08-5578 15 15 Yes Listeria monocytogenes 08-5923 15 15 Yes Listeria monocytogenes L99 15 15 Yes Listeria monocytogenes HCC23 14 14 Yes Listeria monocytogenes 10403S 15 15 Yes Listeria monocytogenes J0161 15 15 Yes Listeria monocytogenes Finland 1998 15 15 Yes Listeria monocytogenes FSL R2-561 15 15 Yes Listeria monocytogenes serotype 4b str. F2365 15 15 Yes Listeria monocytogenes EGD-e 15 15 Yes Geobacillus sp. C56-T3 24 23 Yes Geobacillus sp. Y4.1MC1 26 26 Yes Geobacillus sp. Y412MC52 25 24 Yes Geobacillus sp. Y412MC61 25 24 Yes Amphibacillus xylanus NBRC 15112 16 15 Yes Bacillus amyloliquefaciens subsp. plantarum sequencing 30 29 Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033 28 27 Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3 28 27 Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 27 26 Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113 27 26 Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036 28 27 Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946 30 29 Yes Bacillus amyloliquefaciens LFB112 27 26 Yes Bacillus amyloliquefaciens CC178 28 27 Yes Bacillus amyloliquefaciens Y2 27 26 Yes Bacillus amyloliquefaciens IT-45 28 27 Yes Bacillus amyloliquefaciens XH7 27 26 Yes Bacillus amyloliquefaciens LL3 27 26 Yes Bacillus amyloliquefaciens TA208 29 28 Yes Bacillus amyloliquefaciens DSM 7 28 27 Yes Bacillus licheniformis 9945A 28 27 Yes Bacillus subtilis PY79 29 28 Yes Bacillus subtilis XF-1 27 26 Yes Bacillus subtilis QB928 32 31 Yes Bacillus subtilis BSn5 28 27 Yes Bacillus subtilis subsp. subtilis str. BAB-1 28 27 Yes Bacillus subtilis subsp. subtilis str. BSP1 28 27 Yes Bacillus subtilis subsp. subtilis str. RO-NN-1 26 25 Yes Bacillus subtilis subsp. subtilis 6051-HGW 32 31 Yes Bacillus subtilis subsp. spizizenii TU-B-10 26 25 Yes Bacillus subtilis subsp. spizizenii str. W23 27 26 Yes Bacillus subtilis subsp. natto BEST195 27 26 Yes Bacillus licheniformis DSM 13 = ATCC 14580 28 27 Yes Bacillus infantis NRRL B-14911 35 34 Yes Bacillus cereus subsp. cytotoxis NVH 391-98 28 27 Yes Bacillus toyonensis BCT-7112 30 29 Yes Bacillus thuringiensis HD-771 34 33 Yes Bacillus thuringiensis HD-789 33 32 Yes Bacillus thuringiensis MC28 33 32 Yes Bacillus thuringiensis serovar chinensis CT-43 31 30 Yes Bacillus thuringiensis YBT-1518 31 30 Yes Bacillus thuringiensis Bt407 31 30 Yes Bacillus thuringiensis serovar konkukian str. 97-27 33 32 Yes Bacillus thuringiensis serovar kurstaki str. HD73 30 29 Yes Bacillus thuringiensis BMB171 31 30 Yes Bacillus thuringiensis serovar finitimus YBT-020 29 28 Yes Bacillus thuringiensis serovar thuringiensis str. IS5056 32 31 Yes Bacillus cereus FRI-35 31 30 Yes Bacillus cereus biovar anthracis str. CI 29 28 Yes Bacillus cereus AH820 32 31 Yes Bacillus cereus AH187 32 31 Yes Bacillus cereus B4264 31 30 Yes Bacillus cereus G9842 31 30 Yes Bacillus cereus Q1 32 31 Yes Bacillus cereus F837/76 29 28 Yes Bacillus cereus NC7401 33 32 Yes Bacillus cereus E33L 32 31 Yes Bacillus cereus ATCC 14579 30 29 Yes Bacillus cereus ATCC 10987 31 30 Yes Bacillus anthracis str. H9401 29 28 Yes Bacillus anthracis str. CDC 684 29 28 Yes Bacillus anthracis str. 'Ames Ancestor' 29 28 Yes Bacillus anthracis str. Sterne 28 27 Yes Bacillus anthracis str. Ames 28 27 Yes Bacillus anthracis str. A2012 1 1 Yes Bacillus megaterium WSH-002 30 30 Yes Bacillus megaterium QM B1551 29 29 Yes Bacillus coagulans 36D1 22 21 Yes Staphylococcus aureus subsp. aureus MSHR1132 20 19 Yes Staphylococcus pseudintermedius ED99 20 19 Yes Staphylococcus pasteuri SP1 20 19 Yes Staphylococcus lugdunensis N920143 19 18 Yes Staphylococcus warneri SG1 20 19 Yes Staphylococcus epidermidis ATCC 12228 20 19 Yes Staphylococcus aureus CA-347 20 19 Yes Staphylococcus aureus Bmb9393 21 20 Yes Staphylococcus aureus M1 20 19 Yes Staphylococcus aureus 08BA02176 20 19 Yes Staphylococcus aureus ST228/18412 10 9 Yes Staphylococcus aureus ST228/18341 11 10 Yes Staphylococcus aureus ST228/16125 10 9 Yes Staphylococcus aureus ST228/16035 11 10 Yes Staphylococcus aureus ST228/15532 11 10 Yes Staphylococcus aureus ST228/10497 11 10 Yes Staphylococcus aureus ST228/10388 11 10 Yes Staphylococcus aureus 04-02981 20 19 Yes Staphylococcus aureus RF122 20 19 Yes Staphylococcus aureus subsp. aureus Z172 23 22 Yes Staphylococcus aureus subsp. aureus 6850 19 18 Yes Staphylococcus aureus subsp. aureus SA957 20 19 Yes Staphylococcus aureus subsp. aureus CN1 20 19 Yes Staphylococcus aureus subsp. aureus SA40 20 19 Yes Staphylococcus aureus subsp. aureus 11819-97 20 19 Yes Staphylococcus aureus subsp. aureus M013 20 19 Yes Staphylococcus aureus subsp. aureus HO 5096 0412 20 19 Yes Staphylococcus aureus subsp. aureus VC40 20 19 Yes Staphylococcus aureus subsp. aureus T0131 20 19 Yes Staphylococcus aureus subsp. aureus LGA251 20 19 Yes Staphylococcus aureus subsp. aureus ECT-R 2 20 19 Yes Staphylococcus aureus subsp. aureus JKD6159 20 19 Yes Staphylococcus aureus subsp. aureus ED133 20 19 Yes Staphylococcus aureus subsp. aureus ED98 20 19 Yes Staphylococcus aureus subsp. aureus TW20 23 22 Yes Staphylococcus aureus subsp. aureus 55/2053 21 20 Yes Staphylococcus aureus subsp. aureus TCH60 20 19 Yes Staphylococcus aureus subsp. aureus str. JKD6008 20 19 Yes Staphylococcus aureus subsp. aureus 71193 20 19 Yes Staphylococcus aureus subsp. aureus S0385 20 19 Yes Staphylococcus aureus subsp. aureus str. Newman 19 18 Yes Staphylococcus aureus subsp. aureus Mu3 20 19 Yes Staphylococcus aureus subsp. aureus USA300_TCH1516 20 19 Yes Staphylococcus aureus subsp. aureus USA300_FPR3757 20 19 Yes Staphylococcus aureus subsp. aureus JH9 20 19 Yes Staphylococcus aureus subsp. aureus MSSA476 20 19 Yes Staphylococcus aureus subsp. aureus MRSA252 20 19 Yes Staphylococcus aureus subsp. aureus MW2 20 19 Yes Staphylococcus aureus subsp. aureus N315 20 19 Yes Staphylococcus aureus subsp. aureus Mu50 20 19 Yes Staphylococcus aureus subsp. aureus COL 20 19 Yes Staphylococcus aureus subsp. aureus NCTC 8325 20 19 Yes Chlorobium phaeobacteroides BS1 14 14 Yes Salinibacter ruber DSM 13855 22 22 Yes Rhodothermus marinus SG0.5JP17-172 25 25 Yes Echinicola vietnamensis DSM 17526 38 38 Yes Emticicia oligotrophica DSM 17448 50 48 Yes Prevotella sp. oral taxon 299 str. F0039 22 20 Yes Prevotella dentalis DSM 3688 20 18 Yes Porphyromonas gingivalis TDC60 16 15 Yes Porphyromonas gingivalis W83 17 16 Yes Alistipes shahii WAL 8301 21 21 Yes Bacteroides xylanisolvens XB1A 34 33 Yes Bacteroides fragilis 638R 31 30 Yes Bacteroides fragilis NCTC 9343 34 33 Yes Candidatus Uzinura diaspidicola str. ASNER 2 2 Yes Nonlabens dokdonensis DSW-6 36 36 Yes Psychroflexus torquis ATCC 700755 35 35 Yes Riemerella anatipestifer RA-CH-2 24 24 Yes Riemerella anatipestifer RA-CH-1 26 26 Yes Riemerella anatipestifer RA-GD 24 24 Yes Riemerella anatipestifer ATCC 11845 = DSM 15868 23 23 Yes Blattabacterium sp. (Panesthia angustipennis spadica) Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA 3 3 Yes Blattabacterium sp. (Blaberus giganteus) 3 3 Yes Blattabacterium sp. (Blatta orientalis) Blattabacterium sp. (Blatta orientalis) str. Tarazona 3 3 Yes Blattabacterium sp. (Periplaneta americana) str. BPLAN 3 3 Yes Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 3 3 Yes Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 3 3 Yes Fibrobacter succinogenes subsp. succinogenes S85 13 13 Yes Chlamydia pecorum P787 7 7 Yes Chlamydia pecorum W73 7 7 Yes Chlamydia pecorum PV3056/3 7 7 Yes Chlamydophila pneumoniae LPCoLN 7 7 Yes Chlamydophila pneumoniae J138 7 7 Yes Chlamydophila pneumoniae CWL029 7 7 Yes Chlamydophila pneumoniae AR39 7 7 Yes Chlamydia psittaci 01DC12 7 7 Yes Chlamydia psittaci WC 7 7 Yes Chlamydia psittaci M56 7 7 Yes Chlamydia psittaci WS/RT/E30 7 7 Yes Chlamydia psittaci VS225 7 7 Yes Chlamydia psittaci MN 7 7 Yes Chlamydia psittaci GR9 7 7 Yes Chlamydia psittaci 84/55 7 7 Yes Chlamydia psittaci 08DC60 7 7 Yes Chlamydia psittaci 02DC15 7 7 Yes Chlamydia psittaci C19/98 7 7 Yes Chlamydia psittaci NJ1 7 7 Yes Chlamydia psittaci CP3 7 7 Yes Chlamydophila psittaci RD1 7 7 Yes Chlamydia psittaci Mat116 7 7 Yes Chlamydophila psittaci 6BC 7 7 Yes Chlamydophila psittaci 6BC 7 7 Yes Chlamydia trachomatis C/TW-3 7 7 Yes Chlamydia trachomatis L2/434/Bu(f) 7 7 Yes Chlamydia trachomatis L2/434/Bu(i) 7 7 Yes Chlamydia trachomatis IU888 7 7 Yes Chlamydia trachomatis IU824 7 7 Yes Chlamydia trachomatis L2b/Canada2 7 7 Yes Chlamydia trachomatis L2b/Canada1 7 7 Yes Chlamydia trachomatis L3/404/LN 7 7 Yes Chlamydia trachomatis L2b/Ams5 7 7 Yes Chlamydia trachomatis L2b/Ams4 7 7 Yes Chlamydia trachomatis L2b/Ams3 7 7 Yes Chlamydia trachomatis L2b/Ams2 7 7 Yes Chlamydia trachomatis L2b/Ams1 7 7 Yes Chlamydia trachomatis L2b/795 7 7 Yes Chlamydia trachomatis L2b/CV204 7 7 Yes Chlamydia trachomatis L2b/LST 7 7 Yes Chlamydia trachomatis L2b/UCH-2 7 7 Yes Chlamydia trachomatis L2b/8200/07 7 7 Yes Chlamydia trachomatis L2/25667R 7 7 Yes Chlamydia trachomatis L1/224 7 7 Yes Chlamydia trachomatis L1/115 7 7 Yes Chlamydia trachomatis L1/440/LN 7 7 Yes Chlamydia trachomatis K/SotonK1 7 7 Yes Chlamydia trachomatis Ia/SotonIa3 7 7 Yes Chlamydia trachomatis Ia/SotonIa1 7 7 Yes Chlamydia trachomatis G/SotonG1 7 7 Yes Chlamydia trachomatis F/SotonF3 7 7 Yes Chlamydia trachomatis F/SW5 7 7 Yes Chlamydia trachomatis F/SW4 7 7 Yes Chlamydia trachomatis E/SotonE8 7 7 Yes Chlamydia trachomatis E/SotonE4 7 7 Yes Chlamydia trachomatis E/SW3 7 7 Yes Chlamydia trachomatis D/SotonD6 7 7 Yes Chlamydia trachomatis D/SotonD5 7 7 Yes Chlamydia trachomatis D/SotonD1 7 7 Yes Chlamydia trachomatis A/5291 7 7 Yes Chlamydia trachomatis A/363 7 7 Yes Chlamydia trachomatis RC-J/971 7 7 Yes Chlamydia trachomatis RC-L2/55 7 7 Yes Chlamydia trachomatis J/6276tet1 7 7 Yes Chlamydia trachomatis RC-J/966 7 7 Yes Chlamydia trachomatis RC-J(s)/122 7 7 Yes Chlamydia trachomatis RC-F(s)/342 7 7 Yes Chlamydia trachomatis RC-L2(s)/3 7 7 Yes Chlamydia trachomatis RC-J/953 7 7 Yes Chlamydia trachomatis RC-J943 7 7 Yes Chlamydia trachomatis RC-Fs852 7 7 Yes Chlamydia trachomatis RC-L2s46 7 7 Yes Chlamydia trachomatis RC-F69 7 7 Yes Chlamydia trachomatis L2c 7 7 Yes Chlamydia trachomatis D-LC 7 7 Yes Chlamydia trachomatis D-EC 7 7 Yes Chlamydia trachomatis G/9301 7 7 Yes Chlamydia trachomatis G/11074 7 7 Yes Chlamydia trachomatis G/11222 7 7 Yes Chlamydia trachomatis G/9768 7 7 Yes Chlamydia trachomatis E/150 7 7 Yes Chlamydia trachomatis E/11023 7 7 Yes Chlamydia trachomatis B/TZ1A828/OT 7 7 Yes Chlamydia trachomatis Sweden2 7 7 Yes Chlamydia trachomatis E/Bour 7 7 Yes Chlamydia trachomatis A2497 7 7 Yes Chlamydia trachomatis A2497 7 7 Yes Chlamydia trachomatis L2b/UCH-1/proctitis 7 7 Yes Chlamydia trachomatis 434/Bu 7 7 Yes Chlamydia trachomatis A/HAR-13 7 7 Yes Chlamydia trachomatis D/UW-3/CX 7 7 Yes Singulisphaera acidiphila DSM 18658 72 70 Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 27 27 Yes Leptospira interrogans serovar Lai str. 56601 31 31 Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 31 31 Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 41 40 Yes Brachyspira pilosicoli WesB 13 13 Yes Brachyspira pilosicoli B2904 13 13 Yes Brachyspira pilosicoli P43/6/78 14 14 Yes Borrelia garinii NMJW1 2 2 Yes Borrelia garinii BgVir 2 2 Yes Borrelia afzelii HLJ01 2 2 Yes Borrelia afzelii PKo 2 2 Yes Borrelia burgdorferi CA382 2 2 Yes Borrelia burgdorferi JD1 2 2 Yes Borrelia burgdorferi N40 2 2 Yes Borrelia burgdorferi ZS7 2 2 Yes Borrelia miyamotoi LB-2001 3 3 Yes Treponema pedis str. T A4 12 12 Yes Treponema pallidum str. Fribourg-Blanc 4 4 Yes Treponema pallidum subsp. pertenue str. Gauthier 4 4 Yes Treponema pallidum subsp. pertenue str. CDC2 4 4 Yes Treponema pallidum subsp. pertenue str. SamoaD 4 4 Yes Treponema pallidum subsp. pallidum str. Mexico A 4 4 Yes Treponema pallidum subsp. pallidum str. Chicago 4 4 Yes Treponema pallidum subsp. pallidum DAL-1 4 4 Yes Treponema pallidum subsp. pallidum str. Nichols 4 4 Yes Spirochaeta thermophila DSM 6578 19 19 Yes Thermotoga maritima MSB8 16 15 Yes Hydrogenobacter thermophilus TK-6 29 28 Yes Leptospirillum ferriphilum ML-04 23 23 Yes Fusobacterium nucleatum subsp. vincentii 3_1_36A2 12 11 Yes Fusobacterium nucleatum subsp. animalis 4_8 13 12 Yes Acidithiobacillus ferrooxidans ATCC 23270 32 32 Yes Bdellovibrio exovorus JSS 23 23 Yes Bdellovibrio bacteriovorus str. Tiberius 38 37 Yes Arcobacter butzleri 7h1h 20 20 Yes Arcobacter butzleri ED-1 18 18 Yes Campylobacter jejuni Waterborne C.jejuni Outbreak 14 14 Yes Campylobacter jejuni RM1221 14 14 Yes Campylobacter jejuni subsp. jejuni 00-2544 14 14 Yes Campylobacter jejuni subsp. jejuni 00-2538 14 14 Yes Campylobacter jejuni subsp. jejuni 00-2426 14 14 Yes Campylobacter jejuni subsp. jejuni 00-2425 14 14 Yes Campylobacter jejuni subsp. jejuni PT14 14 14 Yes Campylobacter jejuni subsp. jejuni ICDCCJ07001 15 15 Yes Campylobacter jejuni subsp. jejuni S3 14 14 Yes Campylobacter jejuni subsp. jejuni M1 15 15 Yes Campylobacter jejuni subsp. jejuni IA3902 14 14 Yes Campylobacter jejuni subsp. jejuni 81116 15 15 Yes Campylobacter jejuni subsp. jejuni 81-176 15 15 Yes Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 14 14 Yes Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 14 14 Yes Campylobacter coli 76339 13 13 Yes Campylobacter coli 15-537360 13 13 Yes Campylobacter coli CVM N29710 13 13 Yes Helicobacter cetorum MIT 99-5656 7 7 Yes Helicobacter pylori BM012S 7 7 Yes Helicobacter pylori BM012A 7 7 Yes Helicobacter pylori SouthAfrica20 7 7 Yes Helicobacter pylori UM298 7 7 Yes Helicobacter pylori UM066 7 7 Yes Helicobacter pylori UM037 7 7 Yes Helicobacter pylori UM299 7 7 Yes Helicobacter pylori UM032 7 7 Yes Helicobacter pylori OK310 7 7 Yes Helicobacter pylori OK113 7 7 Yes Helicobacter pylori Rif2 7 7 Yes Helicobacter pylori Rif1 7 7 Yes Helicobacter pylori HUP-B14 7 7 Yes Helicobacter pylori PeCan18 7 7 Yes Helicobacter pylori Shi169 7 7 Yes Helicobacter pylori Shi112 7 7 Yes Helicobacter pylori Shi417 7 7 Yes Helicobacter pylori XZ274 7 7 Yes Helicobacter pylori Aklavik86 7 7 Yes Helicobacter pylori Aklavik117 7 7 Yes Helicobacter pylori SNT49 7 7 Yes Helicobacter pylori Puno135 7 7 Yes Helicobacter pylori Puno120 7 7 Yes Helicobacter pylori ELS37 7 7 Yes Helicobacter pylori Gambia94/24 7 7 Yes Helicobacter pylori SouthAfrica7 7 7 Yes Helicobacter pylori India7 7 7 Yes Helicobacter pylori Lithuania75 7 7 Yes Helicobacter pylori 2017 7 7 Yes Helicobacter pylori 2018 7 7 Yes Helicobacter pylori 908 7 7 Yes Helicobacter pylori F57 7 7 Yes Helicobacter pylori F30 7 7 Yes Helicobacter pylori F16 7 7 Yes Helicobacter pylori Sat464 7 7 Yes Helicobacter pylori Cuz20 7 7 Yes Helicobacter pylori PeCan4 8 8 Yes Helicobacter pylori SJM180 7 7 Yes Helicobacter pylori B8 7 7 Yes Helicobacter pylori 52 7 7 Yes Helicobacter pylori v225d 7 7 Yes Helicobacter pylori 83 7 7 Yes Helicobacter pylori 35A 7 7 Yes Helicobacter pylori P12 7 7 Yes Helicobacter pylori G27 7 7 Yes Helicobacter pylori Shi470 7 7 Yes Helicobacter pylori HPAG1 7 7 Yes Helicobacter pylori 51 7 7 Yes Helicobacter pylori F32 7 7 Yes Helicobacter pylori J99 7 7 Yes Helicobacter pylori 26695 7 7 Yes Helicobacter pylori 26695 7 7 Yes Desulfocapsa sulfexigens DSM 10523 21 21 Yes Desulfobacula toluolica Tol2 25 24 Yes Lawsonia intracellularis N343 5 5 Yes Desulfovibrio hydrothermalis AM13 = DSM 14728 26 24 Yes Desulfovibrio vulgaris RCH1 16 15 Yes Desulfovibrio vulgaris str. 'Miyazaki F' 17 15 Yes Desulfovibrio vulgaris str. Hildenborough 16 15 Yes Desulfovibrio gigas DSM 1382 = ATCC 19364 22 21 Yes Desulfovibrio desulfuricans ND132 23 22 Yes Geobacter sp. M18 31 31 Yes Geobacter sulfurreducens PCA 29 29 Yes Sorangium cellulosum So0157-2 112 106 Yes Anaeromyxobacter sp. K 41 38 Yes Anaeromyxobacter dehalogenans 2CP-C 42 40 Yes Myxococcus stipitatus DSM 14675 69 67 Yes Neisseria meningitidis WUE 2594 22 22 Yes Neisseria meningitidis G2136 22 22 Yes Neisseria meningitidis M04-240196 22 22 Yes Neisseria meningitidis M01-240149 22 22 Yes Neisseria meningitidis NZ-05/33 22 22 Yes Neisseria meningitidis M01-240355 22 22 Yes Neisseria meningitidis 8013 22 22 Yes Neisseria meningitidis 053442 22 22 Yes Neisseria meningitidis Z2491 22 22 Yes Neisseria meningitidis H44/76 22 22 Yes Neisseria meningitidis alpha710 22 22 Yes Neisseria meningitidis MC58 22 22 Yes Neisseria gonorrhoeae TCDC-NG08107 19 19 Yes Neisseria gonorrhoeae FA 1090 20 20 Yes Candidatus Nasuia deltocephalinicola str. NAS-ALF 1 1 Yes Candidatus Tremblaya phenacola PAVE 1 1 Yes Candidatus Kinetoplastibacterium oncopeltii TCC290E 7 7 Yes Candidatus Kinetoplastibacterium galatii TCC219 8 8 Yes Candidatus Kinetoplastibacterium desouzaii TCC079E 8 8 Yes Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis) 7 7 Yes Kinetoplastibacterium blastocrithidii Candidatus TCC012E 8 8 Yes Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 8 8 Yes Candidatus Kinetoplastibacterium crithidii TCC036E 8 8 Yes Burkholderia phenoliruptrix BR3459a 64 63 Yes Pandoraea pnomenusa 3kgm 58 57 Yes Ralstonia pickettii 12J 64 63 Yes Ralstonia solanacearum FQY_4 59 58 Yes Ralstonia solanacearum Po82 59 58 Yes Ralstonia solanacearum PSI07 55 54 Yes Ralstonia solanacearum CMR15 62 61 Yes Ralstonia solanacearum GMI1000 62 61 Yes Polynucleobacter necessarius subsp. necessarius STIR1 20 19 Yes Burkholderia sp. YI23 79 77 Yes Burkholderia sp. CCGE1003 67 66 Yes Burkholderia sp. CCGE1001 59 58 Yes Burkholderia sp. KJ006 59 58 Yes Burkholderia thailandensis MSMB121 63 62 Yes Burkholderia pseudomallei MSHR305 57 56 Yes Burkholderia pseudomallei NCTC 13179 59 58 Yes Burkholderia pseudomallei BPC006 58 57 Yes Burkholderia pseudomallei 1026b 58 57 Yes Burkholderia pseudomallei MSHR346 41 41 Yes Burkholderia pseudomallei 668 57 56 Yes Burkholderia pseudomallei 1710b 55 54 Yes Burkholderia pseudomallei K96243 56 55 Yes Burkholderia mallei NCTC 10229 50 50 Yes Burkholderia mallei NCTC 10247 47 47 Yes Burkholderia mallei ATCC 23344 48 47 Yes Burkholderia lata 73 72 Yes Burkholderia ambifaria MC40-6 62 61 Yes Burkholderia cenocepacia MC0-3 66 65 Yes Burkholderia cenocepacia AU 1054 62 61 Yes Burkholderia cenocepacia J2315 70 69 Yes Burkholderia multivorans ATCC 17616 65 64 Yes Burkholderia cepacia GG4 65 64 Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 18 17 Yes Alicycliphilus denitrificans BC 49 48 Yes Variovorax paradoxus B4 82 81 Yes Variovorax paradoxus EPS 71 70 Yes Taylorella asinigenitalis 14/45 18 17 Yes Taylorella equigenitalis 14/56 18 17 Yes Taylorella equigenitalis ATCC 35865 18 17 Yes Bordetella pertussis CS 36 36 Yes Bordetella parapertussis 18323 35 35 Yes Bordetella parapertussis Bpp5 49 49 Yes Bordetella bronchiseptica MO149 50 50 Yes Bordetella bronchiseptica 253 49 49 Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 74 74 Yes Nitrosomonas sp. AL212 35 35 Yes Sulfuricella denitrificans skB26 53 53 Yes Caulobacter crescentus CB15 48 47 Yes Zymomonas mobilis subsp. mobilis ATCC 29191 15 15 Yes Zymomonas mobilis subsp. mobilis CP4 16 16 Yes Zymomonas mobilis subsp. mobilis ATCC 10988 14 14 Yes Zymomonas mobilis subsp. mobilis ZM4 15 15 Yes Zymomonas mobilis subsp. pomaceae ATCC 29192 18 18 Yes Phaeobacter gallaeciensis DSM 17395 40 40 Yes Phaeobacter gallaeciensis DSM 26640 54 54 Yes Leisingera methylohalidivorans DSM 14336 49 49 Yes Octadecabacter antarcticus 307 36 36 Yes Octadecabacter arcticus 238 38 38 Yes Rhodobacter sphaeroides KD131 34 34 Yes Rhodobacter sphaeroides ATCC 17025 30 30 Yes Rhodobacter sphaeroides 2.4.1 37 37 Yes Paracoccus aminophilus JCM 7686 53 52 Yes Candidatus Endolissoclinum faulkneri L2 9 9 Yes Magnetospirillum gryphiswaldense MSR-1 v2 45 44 Yes Rhodospirillum rubrum ATCC 11170 35 34 Yes Gluconacetobacter diazotrophicus PAl 5 45 44 Yes Gluconobacter oxydans H24 39 38 Yes Acetobacter pasteurianus 386B 29 29 Yes Acetobacter pasteurianus IFO 3283-12 29 29 Yes Acetobacter pasteurianus IFO 3283-01-42C 28 28 Yes Acetobacter pasteurianus IFO 3283-32 29 29 Yes Acetobacter pasteurianus IFO 3283-26 29 29 Yes Acetobacter pasteurianus IFO 3283-22 29 29 Yes Acetobacter pasteurianus IFO 3283-07 29 29 Yes Acetobacter pasteurianus IFO 3283-03 29 29 Yes Micavibrio aeruginosavorus EPB 23 23 Yes Candidatus Pelagibacter ubique HTCC1062 16 16 Yes Wolbachia endosymbiont of Drosophila melanogaster 11 11 Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon 11 11 Yes Wolbachia endosymbiont strain TRS of Brugia malayi 11 11 Yes Wolbachia endosymbiont of Drosophila simulans wHa 11 11 Yes Wolbachia endosymbiont of Drosophila simulans wNo 11 11 Yes Ehrlichia muris AS145 14 14 Yes Ehrlichia ruminantium str. Welgevonden 14 14 Yes Ehrlichia ruminantium str. Welgevonden 14 14 Yes Anaplasma phagocytophilum str. Dog2 15 15 Yes Anaplasma phagocytophilum str. HZ2 15 15 Yes Anaplasma phagocytophilum str. JM 15 15 Yes Anaplasma marginale str. Dawn 15 15 Yes Anaplasma marginale str. Gypsy Plains 11 11 Yes Anaplasma marginale str. St. Maries 15 15 Yes Orientia tsutsugamushi str. Ikeda 25 25 Yes Rickettsia bellii RML369-C 13 13 Yes Rickettsia canadensis str. CA410 10 10 Yes Rickettsia typhi str. B9991CWPP 10 10 Yes Rickettsia typhi str. TH1527 10 10 Yes Rickettsia prowazekii str. Breinl 11 11 Yes Rickettsia prowazekii str. NMRC Madrid E 11 11 Yes Rickettsia prowazekii str. RpGvF24 11 11 Yes Rickettsia prowazekii str. GvV257 11 11 Yes Rickettsia prowazekii str. Dachau 10 10 Yes Rickettsia prowazekii str. Katsinyian 11 11 Yes Rickettsia prowazekii str. Chernikova 11 11 Yes Rickettsia prowazekii Rp22 11 11 Yes Rickettsia prowazekii str. Madrid E 11 11 Yes Rickettsia slovaca str. D-CWPP 12 12 Yes Rickettsia massiliae str. AZT80 12 12 Yes Rickettsia rickettsii str. Arizona 12 12 Yes Rickettsia rickettsii str. Brazil 12 12 Yes Rickettsia rickettsii str. Hauke 12 12 Yes Rickettsia rickettsii str. Colombia 12 12 Yes Rickettsia rickettsii str. Hlp#2 12 12 Yes Rickettsia rickettsii str. Hino 12 12 Yes Rickettsia rickettsii str. Iowa 12 12 Yes Methylobacterium extorquens DM4 62 62 Yes Methylobacterium extorquens PA1 49 49 Yes Brucella ceti TE10759-12 27 27 Yes Brucella ceti TE28753-12 25 25 Yes Brucella canis HSK A52141 29 29 Yes Brucella suis VBI22 29 29 Yes Brucella suis 1330 29 29 Yes Brucella suis 1330 29 29 Yes Brucella melitensis NI 28 28 Yes Brucella melitensis M5-90 28 28 Yes Brucella melitensis M28 28 28 Yes Brucella melitensis bv. 1 str. 16M 28 28 Yes Brucella abortus A13334 28 28 Yes Brucella melitensis biovar Abortus 2308 28 28 Yes Brucella abortus bv. 1 str. 9-941 28 28 Yes Sinorhizobium fredii USDA 257 60 60 Yes Sinorhizobium fredii HH103 58 58 Yes Sinorhizobium meliloti 2011 46 46 Yes Sinorhizobium meliloti GR4 55 55 Yes Sinorhizobium meliloti Rm41 55 55 Yes Sinorhizobium meliloti SM11 60 60 Yes Sinorhizobium meliloti BL225C 56 56 Yes Sinorhizobium meliloti 1021 53 53 Yes Rhizobium etli CFN 42 57 57 Yes Rhizobium etli bv. mimosae str. Mim1 58 58 Yes Rhizobium tropici CIAT 899 49 49 Yes Rhizobium leguminosarum bv. trifolii WSM2304 54 54 Yes Rhizobium leguminosarum bv. trifolii WSM1325 66 66 Yes Liberibacter crescens BT-1 9 9 Yes Candidatus Liberibacter solanacearum CLso-ZC1 8 8 Yes Candidatus Liberibacter americanus str. Sao Paulo 8 8 Yes Candidatus Liberibacter asiaticus str. gxpsy 8 8 Yes Mesorhizobium australicum WSM2073 50 50 Yes Hyphomicrobium nitrativorans NL23 35 35 Yes Hyphomicrobium denitrificans 1NES1 41 41 Yes Oligotropha carboxidovorans OM5 43 43 Yes Oligotropha carboxidovorans OM5 43 43 Yes Rhodopseudomonas palustris DX-1 54 54 Yes Rhodopseudomonas palustris TIE-1 49 49 Yes Rhodopseudomonas palustris HaA2 54 54 Yes Rhodopseudomonas palustris BisB5 50 50 Yes Rhodopseudomonas palustris BisB18 45 45 Yes Rhodopseudomonas palustris CGA009 51 51 Yes Bradyrhizobium sp. S23321 71 71 Yes Bradyrhizobium sp. BTAi1 85 85 Yes Bradyrhizobium oligotrophicum S58 83 83 Yes Bradyrhizobium japonicum USDA 6 79 79 Yes Bartonella australis Aust/NH1 13 13 Yes Bartonella vinsonii subsp. berkhoffii str. Winnie 13 13 Yes Bartonella quintana RM-11 11 11 Yes Simiduia agarivorans SA1 = DSM 21679 45 44 Yes Mannheimia succiniciproducens MBEL55E 24 24 Yes Bibersteinia trehalosi USDA-ARS-USMARC-192 24 24 Yes Aggregatibacter actinomycetemcomitans ANH9381 22 22 Yes Aggregatibacter actinomycetemcomitans D11S-1 22 22 Yes Haemophilus somnus 2336 17 17 Yes Mannheimia haemolytica USMARC_2286 22 22 Yes Mannheimia haemolytica M42548 23 23 Yes Mannheimia haemolytica D174 21 21 Yes Mannheimia haemolytica D171 21 21 Yes Mannheimia haemolytica D153 22 22 Yes Mannheimia haemolytica USDA-ARS-USMARC-183 22 22 Yes Mannheimia haemolytica USDA-ARS-USMARC-185 22 22 Yes Pasteurella multocida 36950 23 23 Yes Pasteurella multocida subsp. multocida str. HN06 22 22 Yes Pasteurella multocida subsp. multocida str. Pm70 24 24 Yes Haemophilus parasuis ZJ0906 19 19 Yes Haemophilus influenzae KR494 21 21 Yes Haemophilus influenzae F3047 20 20 Yes Haemophilus influenzae F3031 20 20 Yes Haemophilus influenzae 10810 21 21 Yes Haemophilus influenzae PittGG 21 21 Yes Haemophilus influenzae 86-028NP 22 22 Yes Haemophilus influenzae R2866 22 22 Yes Haemophilus influenzae R2846 22 22 Yes Haemophilus influenzae Rd KW20 20 20 Yes Actinobacillus suis H91-0380 25 25 Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03 21 21 Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76 20 20 Yes Aeromonas hydrophila ML09-119 45 44 Yes Vibrio fischeri ES114 39 39 Yes Vibrio sp. EJY3 45 44 Yes Vibrio parahaemolyticus BB22OP 42 41 Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749 42 41 Yes Vibrio anguillarum Listonella anguillarum M3 28 28 Yes Vibrio nigripulchritudo VibrioScope 47 47 Yes Vibrio vulnificus CMCP6 38 37 Yes Vibrio vulnificus YJ016 39 38 Yes Vibrio cholerae LMA3984-4 27 27 Yes Vibrio cholerae M66-2 30 30 Yes Vibrio cholerae O395 30 30 Yes Vibrio cholerae IEC224 30 30 Yes Vibrio cholerae O1 str. 2010EL-1786 32 32 Yes Vibrio cholerae MJ-1236 32 32 Yes Vibrio cholerae O1 biovar El Tor str. N16961 30 30 Yes Idiomarina loihiensis GSL 199 33 33 Yes Shewanella sp. W3-18-1 50 49 Yes Shewanella sp. ANA-3 54 52 Yes Shewanella baltica BA175 56 53 Yes Shewanella baltica OS678 51 49 Yes Shewanella baltica OS117 55 52 Yes Shewanella baltica OS223 54 52 Yes Shewanella baltica OS195 52 50 Yes Shewanella baltica OS155 49 46 Yes Shewanella sp. MR-7 50 48 Yes Shewanella putrefaciens 200 49 48 Yes Glaciecola psychrophila 170 53 53 Yes Alteromonas macleodii str. 'Ionian Sea UM4b' 44 43 Yes Alteromonas macleodii str. 'Ionian Sea UM7' 47 46 Yes Alteromonas macleodii str. 'Ionian Sea U8' 43 42 Yes Alteromonas macleodii str. 'Ionian Sea U7' 43 42 Yes Alteromonas macleodii str. 'Ionian Sea U4' 43 42 Yes Alteromonas macleodii str. 'Aegean Sea MED64' 44 43 Yes Alteromonas macleodii str. 'English Channel 615' 43 42 Yes Alteromonas macleodii AltDE1 47 46 Yes Alteromonas macleodii str. 'English Channel 673' 45 44 Yes Alteromonas macleodii str. 'Balearic Sea AD45' 46 45 Yes Alteromonas macleodii str. 'Black Sea 11' 45 44 Yes Alteromonas macleodii ATCC 27126 43 42 Yes Alcanivorax dieselolei B5 60 58 Yes Thalassolituus oleivorans MIL-1 41 39 Yes Candidatus Portiera aleyrodidarum TV 2 2 Yes Candidatus Portiera aleyrodidarum BT-QVLC 3 3 Yes Candidatus Portiera aleyrodidarum BT-Q-AWRs 3 3 Yes Candidatus Portiera aleyrodidarum BT-B-HRs whitefly B from Isarael 3 3 Yes Candidatus Portiera aleyrodidarum BT-B-HRs 3 3 Yes Candidatus Carsonella ruddii PC isolate NHV 2 2 Yes Candidatus Carsonella ruddii HT isolate Thao2000 2 2 Yes Candidatus Carsonella ruddii CS isolate Thao2000 2 2 Yes Candidatus Carsonella ruddii CE isolate Thao2000 2 2 Yes Candidatus Carsonella ruddii DC 2 2 Yes Candidatus Carsonella ruddii HC isolate Thao2000 2 2 Yes Stenotrophomonas maltophilia D457 54 53 Yes Stenotrophomonas maltophilia JV3 52 51 Yes Stenotrophomonas maltophilia R551-3 55 54 Yes Xylella fastidiosa subsp. fastidiosa GB514 25 24 Yes Xylella fastidiosa M12 24 23 Yes Xylella fastidiosa Temecula1 26 25 Yes Xylella fastidiosa 9a5c 26 25 Yes Xanthomonas citri subsp. citri Aw12879 51 50 Yes Xanthomonas campestris pv. vesicatoria str. 85-10 55 54 Yes Xanthomonas axonopodis pv. citrumelo F1 48 47 Yes Xanthomonas axonopodis Xac29-1 50 49 Yes Xanthomonas oryzae pv. oryzicola BLS256 39 38 Yes Xanthomonas oryzae pv. oryzae MAFF 311018 41 40 Yes Xanthomonas oryzae pv. oryzae KACC 10331 38 37 Yes Xanthomonas campestris pv. raphani 756C 46 45 Yes Xanthomonas campestris pv. campestris str. 8004 48 47 Yes Xanthomonas campestris pv. campestris str. ATCC 33913 47 46 Yes Spiribacter salinus M19-40 24 24 Yes Thioalkalivibrio nitratireducens DSM 14787 53 51 Yes Thioflavicoccus mobilis 8321 33 33 Yes Coxiella burnetii CbuK_Q154 15 15 Yes Coxiella burnetii CbuG_Q212 15 15 Yes Coxiella burnetii RSA 331 15 15 Yes Coxiella burnetii RSA 493 15 15 Yes Legionella pneumophila str. Paris 28 28 Yes Legionella pneumophila str. Lens 29 29 Yes Legionella pneumophila subsp. pneumophila LPE509 28 28 Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay 28 28 Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1 27 27 Yes Legionella pneumophila subsp. pneumophila 27 27 Yes Legionella pneumophila subsp. pneumophila 28 28 Yes Legionella pneumophila subsp. pneumophila ATCC 43290 28 28 Yes Legionella pneumophila 2300/99 Alcoy 28 28 Yes Proteus mirabilis BB2000 24 23 Yes Morganella morganii subsp. morganii KT 31 30 Yes Edwardsiella tarda C07-087 26 26 Yes Edwardsiella tarda FL6-60 26 26 Yes Rahnella aquatilis HX2 40 40 Yes Yersinia pseudotuberculosis PB1/+ 28 28 Yes Yersinia pseudotuberculosis YPIII 28 28 Yes Yersinia pseudotuberculosis IP 32953 28 28 Yes Yersinia pestis biovar Microtus str. 91001 27 27 Yes Yersinia pestis A1122 27 27 Yes Yersinia pestis Z176003 24 24 Yes Yersinia pestis D182038 25 25 Yes Yersinia pestis D106004 24 24 Yes Yersinia pestis biovar Medievalis str. Harbin 35 27 27 Yes Yersinia pestis Nepal516 27 27 Yes Yersinia pestis Antiqua 27 27 Yes Yersinia pestis Angola 26 26 Yes Yersinia pestis CO92 28 28 Yes Yersinia pestis KIM10+ 28 28 Yes Yersinia enterocolitica subsp. palearctica 105.5R(r) 34 34 Yes Yersinia enterocolitica subsp. palearctica Y11 34 34 Yes Serratia sp. AS13 46 46 Yes Serratia plymuthica S13 49 49 Yes Serratia plymuthica 4Rx13 44 44 Yes Serratia marcescens FGI94 39 39 Yes Serratia marcescens WW4 41 41 Yes Serratia liquefaciens ATCC 27592 41 41 Yes Dickeya dadantii Ech586 35 34 Yes Dickeya dadantii 3937 36 35 Yes Pectobacterium carotovorum subsp. carotovorum PCC21 40 39 Yes Pantoea ananatis LMG 5342 36 35 Yes Pantoea ananatis PA13 37 36 Yes Pantoea ananatis AJ13355 35 34 Yes Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 5 5 Yes Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 5 5 Yes Buchnera aphidicola (Cinara tujafilina) 4 4 Yes Buchnera aphidicola str. Bp (Baizongia pistaciae) 5 5 Yes Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 5 5 Yes Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) 5 5 Yes Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) 4 4 Yes Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) 5 5 Yes Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) 3 3 Yes Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 5 5 Yes Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 5 5 Yes Buchnera aphidicola str. APS (Acyrthosiphon pisum) 5 5 Yes Buchnera aphidicola str. Sg (Schizaphis graminum) 6 6 Yes Erwinia pyrifoliae DSM 12163 28 28 Yes Erwinia amylovora CFBP1430 27 27 Yes Candidatus Moranella endobia PCVAL 4 4 Yes Cronobacter sakazakii CMCC 45402 39 38 Yes Cronobacter sakazakii SP291 35 34 Yes Cronobacter sakazakii ATCC BAA-894 34 33 Yes secondary endosymbiont of Heteropsylla cubana Thao2000 4 4 Yes Candidatus Blochmannia chromaiodes str. 640 7 7 Yes Candidatus Blochmannia vafer str. BVAF 6 6 Yes Candidatus Blochmannia pennsylvanicus str. BPEN 7 7 Yes Raoultella ornithinolytica B6 47 46 Yes Shigella sonnei 53G 32 31 Yes Shigella flexneri 2002017 32 31 Yes Shigella flexneri 2a str. 2457T 32 31 Yes Shigella flexneri 2a str. 301 32 31 Yes Shigella dysenteriae 1617 32 31 Yes Shigella boydii Sb227 31 30 Yes Salmonella bongori N268-08 44 43 Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 39 38 Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 43 42 Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 43 42 Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 44 43 Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 46 45 Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 44 43 Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 41 40 Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 44 43 Yes Salmonella enterica subsp. enterica serovar Newport str. SL254 47 46 Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 39 39 Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 45 44 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288 46 45 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798 45 44 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 45 44 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 46 45 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 48 47 Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 41 40 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 42 41 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 46 45 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 45 44 Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 45 44 Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 45 44 Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 45 44 Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 43 42 Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18 47 46 Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2 42 41 Yes Salmonella enterica serovar Bovismorbificans genomics 43 42 Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 45 44 Yes Salmonella enterica subsp. enterica serovar Agona str. 24249 43 42 Yes Salmonella enterica subsp. enterica serovar Agona str. SL483 42 41 Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 42 41 Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 44 43 Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 42 41 Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 42 41 Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 45 44 Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182 42 41 Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 45 44 Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 45 44 Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004 39 38 Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 39 38 Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 39 38 Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836 43 42 Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 40 39 Yes Klebsiella oxytoca KCTC 1686 45 44 Yes Klebsiella pneumoniae JM45 45 44 Yes Klebsiella pneumoniae CG43 45 44 Yes Klebsiella pneumoniae KCTC 2242 45 44 Yes Klebsiella pneumoniae 342 47 46 Yes Klebsiella pneumoniae subsp. pneumoniae 1084 45 44 Yes Klebsiella pneumoniae subsp. pneumoniae HS11286 48 47 Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578 45 44 Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 42 41 Yes Enterobacter aerogenes EA1509E 45 44 Yes Escherichia coli E24377A 31 30 Yes Escherichia coli E. coli PMV-1 35 34 Yes Escherichia coli JJ1886 35 34 Yes Escherichia coli LY180 32 31 Yes Escherichia coli APEC O78 33 32 Yes Escherichia coli O7:K1 str. CE10 35 34 Yes Escherichia coli O104:H4 str. 2009EL-2050 33 32 Yes Escherichia coli O104:H4 str. 2009EL-2071 33 32 Yes Escherichia coli O104:H4 str. 2011C-3493 34 33 Yes Escherichia coli NA114 33 32 Yes Escherichia coli P12b 33 32 Yes Escherichia coli str. 'clone D i2' 34 33 Yes Escherichia coli str. 'clone D i14' 34 33 Yes Escherichia coli UM146 38 37 Yes Escherichia coli 042 35 34 Yes Escherichia coli Xuzhou21 34 33 Yes Escherichia coli IHE3034 33 32 Yes Escherichia coli UMNK88 38 37 Yes Escherichia coli O83:H1 str. NRG 857C 34 33 Yes Escherichia coli ABU 83972 34 33 Yes Escherichia coli KO11FL 34 33 Yes Escherichia coli KO11FL 34 33 Yes Escherichia coli LF82 34 33 Yes Escherichia coli ED1a 33 32 Yes Escherichia coli IAI39 30 29 Yes Escherichia coli UMN026 38 37 Yes Escherichia coli 55989 33 32 Yes Escherichia coli S88 34 33 Yes Escherichia coli IAI1 33 32 Yes Escherichia coli W 34 33 Yes Escherichia coli W 34 33 Yes Escherichia coli DH1 34 33 Yes Escherichia coli DH1 34 33 Yes Escherichia coli ATCC 8739 33 32 Yes Escherichia coli BL21(DE3) 33 32 Yes Escherichia coli BL21(DE3) 33 32 Yes Escherichia coli SMS-3-5 35 34 Yes Escherichia coli SE15 36 35 Yes Escherichia coli SE11 35 34 Yes Escherichia coli APEC O1 34 33 Yes Escherichia coli O103:H2 str. 12009 33 32 Yes Escherichia coli UTI89 38 37 Yes Escherichia coli 536 34 33 Yes Escherichia coli HS 33 32 Yes Escherichia coli ETEC H10407 33 32 Yes Escherichia coli O55:H7 str. RM12579 34 33 Yes Escherichia coli O55:H7 str. CB9615 34 33 Yes Escherichia coli O26:H11 str. 11368 34 33 Yes Escherichia coli CFT073 33 32 Yes Escherichia coli O111:H- str. 11128 36 35 Yes Escherichia coli O127:H6 str. E2348/69 34 33 Yes Escherichia coli O157:H7 str. TW14359 34 33 Yes Escherichia coli O157:H7 str. EC4115 34 33 Yes Escherichia coli O157:H7 str. Sakai 34 33 Yes Escherichia coli O157:H7 str. EDL933 34 33 Yes Escherichia coli str. K-12 substr. MDS42 33 32 Yes Escherichia coli BW2952 33 32 Yes Escherichia coli str. K-12 substr. MG1655 33 32 Yes Escherichia coli str. K-12 substr. W3110 34 33 Yes Escherichia coli str. K-12 substr. DH10B 38 36 Yes Escherichia coli B str. REL606 33 32 Yes Enterobacter cloacae SCF1 37 36 Yes Enterobacter cloacae EcWSU1 45 44 Yes Enterobacter cloacae subsp. cloacae ENHKU01 40 39 Yes Enterobacter cloacae subsp. cloacae NCTC 9394 33 32 Yes Enterobacter cloacae subsp. cloacae ATCC 13047 46 45 Yes Azotobacter vinelandii CA6 49 48 Yes Azotobacter vinelandii CA 50 49 Yes Pseudomonas denitrificans ATCC 13867 57 56 Yes Pseudomonas syringae pv. phaseolicola 1448A 42 41 Yes Pseudomonas syringae pv. syringae B728a 48 47 Yes Pseudomonas stutzeri CCUG 29243 54 52 Yes Pseudomonas stutzeri DSM 10701 46 43 Yes Pseudomonas stutzeri DSM 4166 52 50 Yes Pseudomonas stutzeri RCH2 51 49 Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199 48 46 Yes Pseudomonas monteilii SB3101 61 60 Yes Pseudomonas monteilii SB3078 62 61 Yes Pseudomonas putida H8234 67 66 Yes Pseudomonas putida HB3267 60 59 Yes Pseudomonas putida NBRC 14164 58 57 Yes Pseudomonas putida DOT-T1E 60 59 Yes Pseudomonas putida S16 62 61 Yes Pseudomonas putida BIRD-1 59 58 Yes Pseudomonas putida W619 59 58 Yes Pseudomonas putida ND6 65 64 Yes Pseudomonas putida KT2440 61 60 Yes Pseudomonas putida GB-1 59 58 Yes Pseudomonas protegens CHA0 56 55 Yes Pseudomonas poae RE*1-1-14 52 51 Yes Pseudomonas fluorescens F113 58 57 Yes Pseudomonas fluorescens A506 55 54 Yes Pseudomonas fluorescens R124 58 57 Yes Pseudomonas fluorescens Pf0-1 62 61 Yes Pseudomonas resinovorans NBRC 106553 78 77 Yes Pseudomonas mendocina NK-01 57 56 Yes Pseudomonas aeruginosa SCV20265 62 61 Yes Pseudomonas aeruginosa MTB-1 61 60 Yes Pseudomonas aeruginosa LES431 61 60 Yes Pseudomonas aeruginosa RP73 59 58 Yes Pseudomonas aeruginosa B136-33 61 60 Yes Pseudomonas aeruginosa PA1R 59 58 Yes Pseudomonas aeruginosa PA1 60 59 Yes Pseudomonas aeruginosa DK2 61 60 Yes Pseudomonas aeruginosa NCGM2.S1 62 61 Yes Pseudomonas aeruginosa M18 58 57 Yes Pseudomonas aeruginosa LESB58 61 60 Yes Pseudomonas aeruginosa PA7 65 63 Yes Pseudomonas aeruginosa PAO1 59 58 Yes Acinetobacter genomosp. 13TU RUH2624 36 34 Yes Acinetobacter sp. SH024 41 38 Yes Acinetobacter calcoaceticus ruh2202 42 39 Yes Acinetobacter baumannii ZW85-1 36 34 Yes Acinetobacter baumannii TYTH-1 34 32 Yes Acinetobacter baumannii BJAB0868 40 37 Yes Acinetobacter baumannii BJAB0715 37 34 Yes Acinetobacter baumannii BJAB07104 40 37 Yes Acinetobacter baumannii TCDC-AB0715 40 37 Yes Acinetobacter baumannii D1279779 37 34 Yes Acinetobacter baumannii MDR-TJ 41 38 Yes Acinetobacter baumannii 1656-2 41 38 Yes Acinetobacter baumannii ATCC 19606 36 34 Yes Acinetobacter baumannii AB307-0294 35 32 Yes Acinetobacter baumannii AYE 39 36 Yes Acinetobacter baumannii SDF 24 23 Yes Acinetobacter baumannii MDR-ZJ06 38 35 Yes Acinetobacter baumannii AB0057 38 35 Yes Acinetobacter baumannii ACICU 40 37 Yes Acinetobacter radioresistens SH164 31 30 Yes Acinetobacter junii SH205 39 36 Yes Acinetobacter johnsonii SH046 39 37 Yes Acinetobacter lwoffii SH145 38 35 Yes Methylophaga sp. JAM7 28 27 Yes Cycloclasticus zancles 7-ME 34 34 Yes Francisella noatunensis subsp. orientalis LADL--07-285A 19 19 Yes Francisella tularensis subsp. mediasiatica FSC147 19 19 Yes Francisella tularensis subsp. holarctica F92 19 19 Yes Francisella tularensis subsp. holarctica FTNF002-00 19 19 Yes Francisella tularensis subsp. holarctica OSU18 19 19 Yes Francisella tularensis subsp. holarctica LVS 19 19 Yes Francisella tularensis subsp. holarctica FSC200 19 19 Yes Francisella tularensis subsp. tularensis TIGB03 18 18 Yes Francisella tularensis subsp. tularensis TI0902 18 18 Yes Francisella tularensis subsp. tularensis NE061598 18 18 Yes Francisella tularensis subsp. tularensis FSC198 18 18 Yes Francisella tularensis subsp. tularensis SCHU S4 18 18 Yes Francisella cf. novicida Fx1 21 21 Yes Candidatus Nitrososphaera gargensis Ga9.2 17 17 Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 14 14 Yes Caldisphaera lagunensis DSM 15908 11 10 Yes Aeropyrum camini SY1 = JCM 12091 19 18 Yes Sulfolobus islandicus LAL14/1 13 12 Yes Sulfolobus islandicus REY15A 14 13 Yes Sulfolobus islandicus HVE10/4 15 14 Yes Sulfolobus islandicus Y.G.57.14 15 14 Yes Sulfolobus islandicus L.S.2.15 15 14 Yes Sulfolobus islandicus M.16.27 13 12 Yes Sulfolobus islandicus M.14.25 14 13 Yes Sulfolobus islandicus M.16.4 14 13 Yes Sulfolobus islandicus L.D.8.5 14 13 Yes Sulfolobus solfataricus 98/2 14 13 Yes Sulfolobus acidocaldarius SUSAZ 14 13 Yes Sulfolobus acidocaldarius Ron12/I 14 13 Yes Sulfolobus acidocaldarius N8 14 13 Yes Methanomethylovorans hollandica DSM 15978 14 14 Yes Methanolobus psychrophilus R15 18 18 Yes Methanosarcina mazei Tuc01 13 13 Yes Methanoregula formicica Methanoregula formicicum SMSP 11 11 Yes Archaeoglobus sulfaticallidus PM70-1 11 11 Yes Thermococcus sp. AM4 8 7 Yes Thermococcus sp. CL1 9 8 Yes Thermococcus litoralis DSM 5473 12 11 Yes Pyrococcus sp. NA2 4 3 Yes Pyrococcus furiosus DSM 3638 11 10 Yes Candidatus Methanomethylophilus alvus Mx1201 4 4 Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 8 8 Yes Ferroplasma acidarmanus fer1 10 9 Yes Halovivax ruber XH-70 22 21 Yes Natrinema pellirubrum DSM 15624 30 30 Yes Natronococcus occultus SP4 28 28 Yes Natronobacterium gregoryi SP2 31 31 Yes Haloquadratum walsbyi C23 24 24 Yes Halorhabdus tiamatea SARL4B 22 21 Yes Natronomonas moolapensis 8.8.11 26 26 Yes Haloarcula hispanica N601 29 29 Yes Methanococcus maripaludis X1 5 5 Yes Methanococcus maripaludis C6 5 5 Yes Methanococcus maripaludis C7 5 5 Yes Methanococcus maripaludis S2 5 5 Yes Methanobacterium sp. SWAN-1 4 4 Yes Homo sapiens 75_37 (old version GRC) Human 529 448 Yes Homo sapiens Human 232 185 Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 175 134 Yes Heliconius numata 106 89 Yes Loa loa v3.3 (Request) Eye worm 107 78 Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 98 75 Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 94 65 Yes Moniliophthora perniciosa FA553 53 53 Yes Encephalitozoon intestinalis 13 11 Yes Encephalitozoon cuniculi (endoparasite) 13 10 Yes Picea sitchensis Sitka spruce 108 95 Yes Lotus japonicus 210 196 Yes Malus x domestica (Duplicate) Apple 548 478 Yes Ricinus communis Castor bean 241 216 Yes Nicotiana benthamiana 0.4.4 (Early draft) 481 412 Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 295 258 Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 298 261 Yes Phoenix dactylifera Date palm 130 108 Yes Guillardia theta (nucleomorph) 1 1 Yes Acholeplasma laidlawii PG-8A (duplicate) 11 10 Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex) 26 26 Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute) 11 11 Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC) 43 42 Yes Homo sapiens 69_37 Human 179 137 Yes Pan troglodytes 69_2.1.4 Chimpanzee 158 120 Yes Gorilla gorilla 69_3.1 Western gorilla 174 135 Yes Pongo abelii 69_2 Sumatran orangutan 154 119 Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 151 115 Yes Macaca mulatta 69_1 Rhesus monkey 175 138 Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 183 141 Yes Otolemur garnettii 69_3 Small-eared galago 158 119 Yes Microcebus murinus 69_1 Gray mouse lemur 129 91 Yes Rattus norvegicus 69_3.4 Norway rat 188 148 Yes Mus musculus 69_38 House mouse 178 137 Yes Dipodomys ordii 69_1 Ord's kangaroo rat 134 101 Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 161 122 Yes Cavia porcellus 69_3 Domestic guinea pig 157 115 Yes Oryctolagus cuniculus 69_2 Rabbit 164 124 Yes Ochotona princeps 69 American pika 142 113 Yes Tupaia belangeri 69 Northern tree shrew 118 94 Yes Sus scrofa 69_10.2 Pig 160 125 Yes Bos taurus 69_3.1 Cattle 173 132 Yes Vicugna pacos 69_1 Alpaca 102 80 Yes Tursiops truncatus 69_1 Bottlenose dolphin 150 111 Yes Mustela putorius furo 69_1.0 Domestic ferret 149 113 Yes Ailuropoda melanoleuca 69_1 Giant panda 164 124 Yes Canis familiaris 69_3.1 Dog 179 134 Yes Felis catus 69 Domestic cat 110 79 Yes Equus caballus 69_2 Horse 165 123 Yes Myotis lucifugus 69_2.0 Little brown bat 160 116 Yes Pteropus vampyrus 69_1 Large flying fox 148 109 Yes Sorex araneus 69_1 European shrew 98 74 Yes Erinaceus europaeus 69 Western European hedgehog 106 85 Yes Procavia capensis 69_1 Cape rock hyrax 134 101 Yes Loxodonta africana 69_3 African savanna elephant 164 124 Yes Echinops telfairi 69 Small Madagascar hedgehog 120 89 Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 106 82 Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 92 74 Yes Macropus eugenii 69_1.0 Tammar wallaby 119 88 Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 147 106 Yes Monodelphis domestica 69_5 Gray short-tailed opossum 160 117 Yes Ornithorhynchus anatinus 69_5 Platypus 115 92 Yes Petromyzon marinus 69_7.0 Sea lamprey 87 58 Yes Meleagris gallopavo 69_2 Turkey 117 82 Yes Gallus gallus 69_2 Chicken 126 92 Yes Taeniopygia guttata 69_3.2.4 Zebra finch 127 95 Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 140 104 Yes Anolis carolinensis 69_2.0 Green anole 137 102 Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 141 108 Yes Latimeria chalumnae 69_1 Coelacanth 141 101 Yes Gadus morhua 69_1 Atlantic cod 150 109 Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 156 113 Yes Takifugu rubripes 69_4 Torafugu 157 110 Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 157 114 Yes Oryzias latipes 69_1 Japanese medaka 155 111 Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 171 125 Yes Oreochromis niloticus 69_1.0 Nile tilapia 171 122 Yes Danio rerio 69_9 Zebrafish 189 144 Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 102 81 Yes Ciona intestinalis 69 Vase tunicate 120 95 Yes Drosophila melanogaster 69_5 Fruit fly 145 116 Yes Caenorhabditis elegans 69_215 Roundworm 184 153 Yes Saccharomyces cerevisiae 69_4 Baker's yeast 55 46 Yes Arabidopsis thaliana 10 Thale cress 281 247 Yes 1_050719N (meta-genome) 276 265 Yes 1_Upper_euphotic (meta-genome) 53 53 Yes 2_050719S (meta-genome) 309 296 Yes 2_Base_of_chrolophyll_max (meta-genome) 22 22 Yes 3_050719R (meta-genome) 287 277 Yes 3_Below_base_of_euphotic (meta-genome) 63 63 Yes 4_050719Q (meta-genome) 442 434 Yes 4_Deep_abyss (meta-genome) 79 79 Yes 5_050719P (meta-genome) 417 406 Yes 5_Below_upper_mesopelagic (meta-genome) 63 62 Yes 6_Upper_euphotic (meta-genome) 70 70 Yes 7_Oxygen_minimum_layer (meta-genome) 76 76 Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 48 48 Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 82 82 Yes Air microbial communities Singapore indoor air filters 1 (meta-genome) 276 273 Yes Air microbial communities Singapore indoor air filters 2 (meta-genome) 315 311 Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome) 13 13 Yes Atta cephalotes fungus garden (ACEF) (meta-genome) 299 293 Yes Bath Hot Springs, filamentous community (meta-genome) 68 65 Yes Bath Hot Springs, planktonic community (meta-genome) 157 152 Yes Combined (meta-genome) 933 925 Yes Core Eukaryotic Genes 458 (CEGMA) 36 18 Yes Crater Hills (meta-genome) 9 9 Yes Cyphomyrmex longiscapus fungus garden (meta-genome) 801 789 Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 254 253 Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 236 235 Yes Dump bottom (Dump bottom) (meta-genome) 2093 2081 Yes Dump top (Dump top) (meta-genome) 1769 1753 Yes Endophytic microbiome from Rice (meta-genome) 251 251 Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 250 246 Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 275 274 Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 246 246 Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 386 385 Yes Fungus garden combined (combined) (meta-genome) 450 445 Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 790 783 Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 964 948 Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 180 179 Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 54 54 Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 55 55 Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 42 42 Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 37 37 Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 49 49 Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 51 51 Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 69 69 Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 35 35 Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 42 42 Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 31 30 Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome) 3 3 Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 155 155 Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome) 29 27 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome) 135 124 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome) 53 48 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome) 28 27 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 219 207 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 148 143 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 169 160 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome) 117 113 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 307 303 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 227 226 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 180 173 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 185 175 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome) 97 89 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome) 37 34 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 250 241 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome) 70 68 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) 74 71 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 233 227 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 321 318 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 245 243 Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome) 111 106 Yes Human Gut Community Subject 7 (meta-genome) 42 41 Yes Human Gut Community Subject 8 (meta-genome) 43 43 Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 152 152 Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 314 314 Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 297 297 Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome) 105 105 Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 1806 1787 Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 455 450 Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 130 128 Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 435 429 Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 398 395 Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 431 426 Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 437 437 Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 196 196 Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 247 245 Yes Mouse Gut Community lean1 (meta-genome) 14 13 Yes Mouse Gut Community lean2 (meta-genome) 12 12 Yes Mouse Gut Community lean3 (meta-genome) 6 6 Yes Mouse Gut Community ob1 (meta-genome) 7 7 Yes Mouse Gut Community ob2 (meta-genome) 6 6 Yes NCBI 2017_08 genome 2893446 2810825 Yes Nymph Lake Bulk Water (meta-genome) 4 4 Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 795 790 Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome) 59 57 Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome) 21 21 Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome) 3 3 Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome) 57 56 Yes Protozoadb 2010_08 (Protozoadb) 2107 1746 Yes simHC - Simulated High Complexity Metagenome (meta-genome) 748 745 Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 486 481 Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 626 622 Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome) 14 13 Yes Single-cell genome from subgingival tooth surface TM7b (meta-genome) 1 1 Yes Single-cell genome from subgingival tooth surface TM7c (meta-genome) 3 3 Yes Sludge/Australian, Phrap Assembly (meta-genome) 240 235 Yes Sludge/US, Jazz Assembly (meta-genome) 144 141 Yes Sludge/US, Phrap Assembly (meta-genome) 310 305 Yes Soil microbial communities from Minnesota Farm (meta-genome) 769 761 Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 1589 1584 Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 1389 1383 Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 753 752 Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 878 874 Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 1097 1091 Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 1250 1246 Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 237 234 Yes STRING v9.0.5 (STRING) 41888 38725 Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 122 121 Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 989 985 Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 202 202 Yes Termite Protist Endosymbiont Community (meta-genome) 45 45 Yes Uniprot 2018_03 genome 814729 771535 Yes Uranium Contaminated Groundwater FW106 (meta-genome) 112 111 Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 410 405 Yes Global Ocean Sampling Expedition (GOS) 46090 45950 Yes NCBI plasmid sequences (Plasmids) 2010 1993 Yes NCBI viral sequences (Viral) 561 560 Yes PDB chains (SCOP 1.75 ) (PDB) 301 292 Yes Protein Data Bank (all PDB sequenc) 4344 4161 Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 10440 10418 Yes TargetDB 2172 2034 Yes The Salmonella enterica Pan-genome (meta-genome) 1295 1281 Yes UniProt 236 236
