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Nitrogenase accessory factor-like superfamily domain assignments
in
Candidatus Caldiarchaeum subterraneum


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Select to display   Genome       Domains   Proteins
No Yes ALL   29035 29035
No Yes Cyanophora paradoxa   1 1
No Yes Microcoleus sp. PCC 7113   2 2
No Yes Trichodesmium erythraeum IMS101   2 2
No Yes Cyanothece sp. PCC 8802   3 3
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes cyanobacterium UCYN-A   2 2
No Yes Halothece sp. PCC 7418   4 4
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   2 2
No Yes Anabaena variabilis ATCC 29413   6 6
No Yes 'Nostoc azollae' 0708   2 2
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   3 3
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   2 2
No Yes Cryptobacterium curtum DSM 15641   1 1
No Yes Eggerthella sp. YY7918   2 2
No Yes Eggerthella lenta DSM 2243   2 2
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Frankia symbiont of Datisca glomerata   2 2
No Yes Frankia sp. EAN1pec   2 2
No Yes Frankia alni ACN14a   2 2
No Yes Nocardioides sp. JS614   1 1
No Yes Propionibacterium acnes SK137   1 1
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   1 1
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Dehalococcoides ethenogenes 195   2 2
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   2 2
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Oceanithermus profundus DSM 14977   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   1 1
No Yes Thermus thermophilus HB27   1 1
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Acidaminococcus intestini RyC-MR95   1 1
No Yes Megamonas hypermegale   1 1
No Yes Selenomonas sputigena ATCC 35185   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   2 2
No Yes Natranaerobius thermophilus JW/NM-WN-LF   2 2
No Yes Symbiobacterium thermophilum IAM 14863   2 2
No Yes Clostridium clariflavum DSM 19732   7 6
No Yes Eubacterium siraeum   1 1
No Yes Clostridium cellulolyticum H10   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ethanoligenens harbinense YUAN-3   7 7
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   3 3
No Yes Ruminococcus albus 7   4 4
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Oscillibacter valericigenes Sjm18-20   4 4
No Yes butyrate-producing bacterium SS3/4   2 2
No Yes butyrate-producing bacterium SM4/1   2 2
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Thermincola potens JR   3 3
No Yes Pelotomaculum thermopropionicum SI   4 4
No Yes Desulfosporosinus acidiphilus SJ4   4 4
No Yes Desulfosporosinus orientis DSM 765   4 4
No Yes Dehalobacter sp. DCA   2 2
No Yes Dehalobacter sp. CF   2 2
No Yes Syntrophobotulus glycolicus DSM 8271   6 6
No Yes Desulfitobacterium hafniense Y51   7 7
No Yes Desulfitobacterium dehalogenans ATCC 51507   2 2
No Yes Desulfotomaculum reducens MI-1   5 5
No Yes Desulfotomaculum acetoxidans DSM 771   3 3
No Yes Desulfotomaculum kuznetsovii DSM 6115   3 3
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   2 2
No Yes Desulfotomaculum ruminis DSM 2154   3 3
No Yes Acetobacterium woodii DSM 1030   5 5
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium difficile 630   1 1
No Yes Clostridium sticklandii DSM 519   2 2
No Yes Filifactor alocis ATCC 35896   1 1
No Yes Clostridium saccharolyticum WM1   3 3
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   3 3
No Yes [Ruminococcus] obeum   2 2
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   2 2
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Roseburia intestinalis   1 1
No Yes Butyrivibrio proteoclasticus B316   1 1
No Yes Butyrivibrio fibrisolvens   2 2
No Yes Syntrophothermus lipocalidus DSM 12680   2 2
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   2 2
No Yes Heliobacterium modesticaldum Ice1   3 3
No Yes Alkaliphilus metalliredigens QYMF   3 3
No Yes Clostridium sp. BNL1100   3 3
No Yes Clostridium novyi NT   2 2
No Yes Clostridium ljungdahlii DSM 13528   6 6
No Yes Clostridium kluyveri DSM 555   10 10
No Yes Clostridium beijerinckii NCIMB 8052   3 3
No Yes Clostridium tetani E88   1 1
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   2 2
No Yes Clostridium botulinum A str. ATCC 3502   3 3
No Yes Clostridium acetobutylicum ATCC 824   2 2
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   2 2
No Yes Caldicellulosiruptor hydrothermalis 108   2 2
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   2 2
No Yes Caldicellulosiruptor kristjanssonii 177R1B   2 2
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   2 2
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   5 5
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   3 3
No Yes Thermodesulfobium narugense DSM 14796   4 4
No Yes Tepidanaerobacter acetatoxydans Re1   2 2
No Yes Thermoanaerobacter tengcongensis MB4   4 4
No Yes Carboxydothermus hydrogenoformans Z-2901   1 1
No Yes Moorella thermoacetica ATCC 39073   2 2
No Yes Ammonifex degensii KC4   3 3
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   3 3
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   3 3
No Yes Thermoanaerobacter sp. X514   2 2
No Yes Thermoanaerobacter italicus Ab9   3 3
No Yes Thermoanaerobacter wiegelii Rt8.B1   6 6
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   3 3
No Yes Acetohalobium arabaticum DSM 5501   2 2
No Yes Halothermothrix orenii H 168   3 3
No Yes Halanaerobium praevalens DSM 2228   2 2
No Yes Kyrpidia tusciae DSM 2912   1 1
No Yes Paenibacillus terrae HPL-003   2 2
No Yes Melioribacter roseus P3M   2 2
No Yes Ignavibacterium album JCM 16511   5 5
No Yes Pelodictyon phaeoclathratiforme BU-1   2 2
No Yes Chlorobium luteolum DSM 273   2 2
No Yes Chlorobium chlorochromatii CaD3   2 2
No Yes Chlorobium phaeobacteroides DSM 266   2 2
No Yes Chlorobium phaeovibrioides DSM 265   2 2
No Yes Chlorobium limicola DSM 245   2 2
No Yes Chlorobaculum parvum NCIB 8327   2 2
No Yes Chlorobium tepidum TLS   2 2
No Yes Chloroherpeton thalassium ATCC 35110   2 2
No Yes Prosthecochloris aestuarii DSM 271   2 2
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Paludibacter propionicigenes WB4   3 3
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2   1 1
No Yes Bacteroides sp. CF50   2 2
No Yes Bacteroides vulgatus ATCC 8482   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Methylacidiphilum infernorum V4   2 2
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Thermovirga lienii DSM 17291   2 2
No Yes Aminobacterium colombiense DSM 12261   2 2
No Yes Thermanaerovibrio acidaminovorans DSM 6589   2 2
No Yes Anaerobaculum mobile DSM 13181   2 2
No Yes Spirochaeta smaragdinae DSM 11293   4 4
No Yes Sphaerochaeta pleomorpha str. Grapes   2 2
No Yes Sphaerochaeta globus str. Buddy   2 2
No Yes Spirochaeta caldaria DSM 7334   4 4
No Yes Treponema azotonutricium ZAS-9   2 2
No Yes Treponema primitia ZAS-2   1 1
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Spirochaeta thermophila DSM 6192   3 3
No Yes Thermodesulfatator indicus DSM 15286   4 4
No Yes Thermodesulfobacterium sp. OPB45   4 4
No Yes Desulfurispirillum indicum S5   2 2
No Yes Calditerrivibrio nitroreducens DSM 19672   2 2
No Yes Denitrovibrio acetiphilus DSM 12809   7 7
No Yes Deferribacter desulfuricans SSM1   3 3
No Yes Flexistipes sinusarabici DSM 4947   1 1
No Yes Marinitoga piezophila KA3   3 3
No Yes Petrotoga mobilis SJ95   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   3 3
No Yes Kosmotoga olearia TBF 19.5.1   2 2
No Yes Fervidobacterium pennivorans DSM 9078   1 1
No Yes Fervidobacterium nodosum Rt17-B1   1 1
No Yes Thermosipho melanesiensis BI429   3 3
No Yes Thermosipho africanus TCF52B   1 1
No Yes Thermotoga lettingae TMO   1 1
No Yes Thermotoga sp. RQ2   2 2
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga neapolitana DSM 4359   1 1
No Yes Thermotoga maritima MSB8   2 2
No Yes Thermovibrio ammonificans HB-1   3 3
No Yes Desulfurobacterium thermolithotrophum DSM 11699   3 3
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Sulfurihydrogenibium azorense Az-Fu1   1 1
No Yes Hydrogenobaculum sp. SN   1 1
No Yes Hydrogenobaculum sp. HO   1 1
No Yes Hydrogenobaculum sp. Y04AAS1   2 2
No Yes Thermocrinis albus DSM 14484   2 2
No Yes Hydrogenobacter thermophilus TK-6   1 1
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Caldisericum exile AZM16c01   3 3
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   3 3
No Yes Leptospirillum ferrooxidans C2-3   2 2
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Ilyobacter polytropus DSM 2926   4 4
No Yes Acidithiobacillus ferrivorans SS3   2 2
No Yes Acidithiobacillus ferrooxidans ATCC 53993   2 2
No Yes Nautilia profundicola AmH   5 5
No Yes Nitratifractor salsuginis DSM 16511   1 1
No Yes Sulfurospirillum deleyianum DSM 6946   4 4
No Yes Sulfurospirillum barnesii SES-3   7 7
No Yes Arcobacter sp. L   6 6
No Yes Arcobacter nitrofigilis DSM 7299   6 6
No Yes Arcobacter butzleri RM4018   1 1
No Yes uncultured Sulfuricurvum sp. RIFRC-1   6 6
No Yes Sulfuricurvum kujiense DSM 16994   9 9
No Yes Wolinella succinogenes DSM 1740   5 5
No Yes Nitratiruptor sp. SB155-2   1 1
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfarculus baarsii DSM 2075   4 4
No Yes Desulfobacca acetoxidans DSM 11109   4 4
No Yes Syntrophus aciditrophicus SB   5 5
No Yes Desulfomonile tiedjei DSM 6799   5 5
No Yes Syntrophobacter fumaroxidans MPOB   6 6
No Yes Desulfurivibrio alkaliphilus AHT2   2 2
No Yes Desulfotalea psychrophila LSv54   2 2
No Yes Desulfobulbus propionicus DSM 2032   8 8
No Yes Desulfatibacillum alkenivorans AK-01   5 5
No Yes Desulfobacterium autotrophicum HRM2   10 10
No Yes Desulfococcus oleovorans Hxd3   4 4
No Yes Desulfohalobium retbaense DSM 5692   5 5
No Yes Desulfomicrobium baculatum DSM 4028   8 8
No Yes Desulfovibrio piezophilus   8 8
No Yes Desulfovibrio aespoeensis Aspo-2   8 8
No Yes Lawsonia intracellularis PHE/MN1-00   1 1
No Yes Desulfovibrio magneticus RS-1   8 8
No Yes Desulfovibrio alaskensis G20   7 7
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   8 7
No Yes Desulfovibrio salexigens DSM 2638   8 8
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   3 3
No Yes Desulfovibrio africanus str. Walvis Bay   8 8
No Yes Hippea maritima DSM 10411   4 4
No Yes Geobacter daltonii FRC-32   5 5
No Yes Geobacter sp. M21   3 3
No Yes Geobacter uraniireducens Rf4   4 4
No Yes Geobacter lovleyi SZ   7 7
No Yes Geobacter bemidjiensis Bem   2 2
No Yes Geobacter sulfurreducens KN400   3 3
No Yes Geobacter metallireducens GS-15   2 2
No Yes Pelobacter propionicus DSM 2379   7 7
No Yes Pelobacter carbinolicus DSM 2380   9 9
No Yes Anaeromyxobacter sp. Fw109-5   3 3
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Dechloromonas aromatica RCB   5 5
No Yes Azoarcus sp. KH32C   5 5
No Yes Azoarcus sp. BH72   6 6
No Yes Dechlorosoma suillum PS   3 3
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   4 4
No Yes Rubrivivax gelatinosus IL144   3 3
No Yes Leptothrix cholodnii SP-6   2 2
No Yes Burkholderia phymatum STM815   2 2
No Yes Burkholderia xenovorans LB400   2 2
No Yes Cupriavidus taiwanensis LMG 19424   2 2
No Yes Burkholderia sp. CCGE1002   2 2
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Polaromonas naphthalenivorans CJ2   3 3
No Yes Herbaspirillum seropedicae SmR1   2 2
No Yes Sideroxydans lithotrophicus ES-1   5 5
No Yes Magnetococcus marinus MC-1   4 4
No Yes Novosphingobium sp. PP1Y   1 1
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   2 2
No Yes Rhodobacter sphaeroides ATCC 17029   2 2
No Yes Rhodobacter capsulatus SB 1003   4 4
No Yes Rhodospirillum photometricum DSM 122   4 4
No Yes Magnetospirillum magneticum AMB-1   4 4
No Yes Rhodospirillum centenum SW   3 3
No Yes Rhodospirillum rubrum F11   6 6
No Yes Azospirillum lipoferum 4B   3 3
No Yes Azospirillum sp. B510   3 3
No Yes Azospirillum brasilense Sp245   6 6
No Yes Gluconacetobacter diazotrophicus PAl 5   2 2
No Yes Xanthobacter autotrophicus Py2   3 3
No Yes Azorhizobium caulinodans ORS 571   2 2
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Sinorhizobium fredii NGR234   2 2
No Yes Sinorhizobium medicae WSM419   2 2
No Yes Sinorhizobium meliloti AK83   2 2
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium etli CIAT 652   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 2
No Yes Mesorhizobium loti MAFF303099   2 2
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   2 2
No Yes Rhodomicrobium vannielii ATCC 17100   8 8
No Yes Hyphomicrobium sp. MC1   2 2
No Yes Rhodopseudomonas palustris BisA53   5 5
No Yes Bradyrhizobium japonicum USDA 110   2 2
No Yes Bradyrhizobium sp. ORS 278   3 3
No Yes Methylocystis sp. SC2   2 2
No Yes Teredinibacter turnerae T7901   7 7
No Yes Tolumonas auensis DSM 9187   6 6
No Yes Aeromonas veronii B565   2 2
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas sp. CNPT3   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   2 2
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylomonas methanica MC09   5 5
No Yes Methylococcus capsulatus str. Bath   2 2
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Halorhodospira halophila SL1   3 3
No Yes Allochromatium vinosum DSM 180   6 6
No Yes Thiocystis violascens DSM 198   6 6
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 3
No Yes Serratia sp. ATCC 39006   4 4
No Yes Dickeya dadantii Ech703   4 4
No Yes Pectobacterium atrosepticum SCRI1043   3 3
No Yes Pantoea sp. At-9b   3 3
No Yes Klebsiella oxytoca E718   3 3
No Yes Klebsiella variicola At-22   3 3
No Yes Enterobacter sp. R4-368   3 3
No Yes Azotobacter vinelandii DJ   8 8
No Yes Pseudomonas stutzeri A1501   5 5
No Yes Nanoarchaeum equitans Kin4-M   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   4 4
No Yes Acidilobus saccharovorans 345-15   2 2
No Yes Fervidicoccus fontis Kam940   2 2
No Yes Pyrolobus fumarii 1A   2 2
No Yes Hyperthermus butylicus DSM 5456   1 1
No Yes Thermogladius cellulolyticus 1633   1 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Aeropyrum pernix K1   1 1
No Yes Ignicoccus hospitalis KIN4/I   2 2
No Yes Thermosphaera aggregans DSM 11486   1 1
No Yes Staphylothermus hellenicus DSM 12710   3 3
No Yes Staphylothermus marinus F1   2 2
No Yes Desulfurococcus fermentans DSM 16532   1 1
No Yes Desulfurococcus kamchatkensis 1221n   2 2
No Yes Desulfurococcus mucosus DSM 2162   2 2
No Yes Metallosphaera cuprina Ar-4   2 2
No Yes Metallosphaera sedula DSM 5348   3 3
No Yes Acidianus hospitalis W1   3 3
No Yes Sulfolobus tokodaii str. 7   2 2
No Yes Sulfolobus islandicus Y.N.15.51   3 3
No Yes Sulfolobus solfataricus P2   2 2
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Thermofilum pendens Hrk 5   2 2
No Yes Vulcanisaeta moutnovskia 768-28   3 3
No Yes Vulcanisaeta distributa DSM 14429   3 3
No Yes Caldivirga maquilingensis IC-167   2 2
No Yes Pyrobaculum sp. 1860   2 2
No Yes Pyrobaculum calidifontis JCM 11548   2 2
No Yes Pyrobaculum arsenaticum DSM 13514   2 2
No Yes Pyrobaculum oguniense TE7   2 2
No Yes Thermoproteus neutrophilus V24Sta   1 1
No Yes Pyrobaculum aerophilum str. IM2   3 3
No Yes Pyrobaculum islandicum DSM 4184   2 2
No Yes Thermoproteus uzoniensis 768-20   2 2
No Yes Thermoproteus tenax Kra 1   2 2
No Yes Methanocella arvoryzae MRE50   5 5
No Yes Methanocella conradii HZ254   5 5
No Yes Methanocella paludicola SANAE   8 8
No Yes Methanosaeta harundinacea 6Ac   3 3
No Yes Methanosaeta thermophila PT   3 3
No Yes Methanosaeta concilii GP6   3 3
No Yes Methanohalobium evestigatum Z-7303   2 2
No Yes Methanococcoides burtonii DSM 6242   6 6
No Yes Methanosarcina acetivorans C2A   7 7
No Yes Methanosarcina mazei Go1   2 2
No Yes Methanosarcina barkeri str. Fusaro   5 5
No Yes Methanohalophilus mahii DSM 5219   2 2
No Yes Methanosphaerula palustris E1-9c   2 2
No Yes Methanospirillum hungatei JF-1   2 2
No Yes Methanocorpusculum labreanum Z   3 2
No Yes Methanoplanus petrolearius DSM 11571   4 4
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   3 3
No Yes Methanopyrus kandleri AV19   1 1
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus profundus DSM 5631   3 3
No Yes Archaeoglobus veneficus SNP6   2 2
No Yes Archaeoglobus fulgidus DSM 4304   4 4
No Yes Thermococcus sp. 4557   4 4
No Yes Thermococcus onnurineus NA1   4 4
No Yes Thermococcus kodakarensis KOD1   6 6
No Yes Thermococcus gammatolerans EJ3   4 4
No Yes Thermococcus sibiricus MM 739   4 4
No Yes Thermococcus barophilus MP   4 4
No Yes Pyrococcus sp. ST04   3 3
No Yes Pyrococcus yayanosii CH1   2 2
No Yes Pyrococcus horikoshii OT3   5 5
No Yes Pyrococcus abyssi GE5   3 3
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   3 3
No Yes Thermoplasma volcanium GSS1   2 2
No Yes Thermoplasma acidophilum DSM 1728   2 2
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   2 2
No Yes Methanocaldococcus fervens AG86   2 2
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   2 2
No Yes Methanothermococcus okinawensis IH1   2 2
No Yes Methanococcus aeolicus Nankai-3   2 2
No Yes Methanococcus maripaludis C5   5 5
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   3 3
No Yes Methanothermus fervidus DSM 2088   1 1
No Yes Methanothermobacter marburgensis str. Marburg   2 2
No Yes Methanothermobacter thermautotrophicus str. Delta H   4 4
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Methanobrevibacter smithii ATCC 35061   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   7 7
No Yes Aciduliprofundum sp. MAR08-339   7 7
No Yes Aciduliprofundum boonei T469   6 6
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   2 2
No Yes Synechococcus sp. JA-3-3Ab   2 2
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. PCC 7822   3 3
No Yes Cyanothece sp. PCC 7425   2 2
No Yes Cyanothece sp. PCC 7424   3 3
No Yes Cyanothece sp. ATCC 51142   3 3
No Yes Cyanothece sp. PCC 8801   3 3
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   5 5
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   2 2
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Gordonibacter pamelaeae 7-10-1-b   2 2
No Yes Adlercreutzia equolifaciens DSM 19450   2 2
No Yes Frankia sp. CcI3   2 2
No Yes Propionibacterium avidum 44067   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   1 1
No Yes Propionibacterium acnes HL096PA1   1 1
No Yes Propionibacterium acnes 6609   1 1
No Yes Propionibacterium acnes 266   1 1
No Yes Propionibacterium acnes KPA171202   1 1
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus SG0.5JP17-16   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Clostridium acidurici 9a   3 3
No Yes Desulfosporosinus meridiei DSM 13257   3 3
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   1 1
No Yes Desulfitobacterium hafniense DCB-2   7 7
No Yes Desulfotomaculum gibsoniae DSM 7213   3 3
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Coprococcus catus GD/7   1 1
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium sp. SY8519   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium autoethanogenum DSM 10061   3 3
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   4 4
No Yes Clostridium kluyveri NBRC 12016   10 10
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium pasteurianum BC1   4 4
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum BKT015925   2 2
No Yes Clostridium botulinum F str. 230613   3 3
No Yes Clostridium botulinum F str. Langeland   3 3
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   3 3
No Yes Clostridium botulinum Ba4 str. 657   3 3
No Yes Clostridium botulinum A2 str. Kyoto   3 3
No Yes Clostridium botulinum A3 str. Loch Maree   3 3
No Yes Clostridium botulinum A str. Hall   3 3
No Yes Clostridium botulinum A str. ATCC 19397   3 3
No Yes Clostridium acetobutylicum DSM 1731   2 2
No Yes Clostridium acetobutylicum EA 2018   2 2
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   4 4
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   4 4
No Yes Thermacetogenium phaeum DSM 12270   5 5
No Yes Thermoanaerobacter sp. X513   2 2
No Yes Halobacteroides halobius DSM 5150   2 2
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Chlorobium phaeobacteroides BS1   2 2
No Yes Alistipes shahii WAL 8301   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Spirochaeta thermophila DSM 6578   3 3
No Yes Thermotoga maritima MSB8   2 2
No Yes Hydrogenobacter thermophilus TK-6   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   2 2
No Yes Arcobacter butzleri 7h1h   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   6 6
No Yes Desulfobacula toluolica Tol2   8 8
No Yes Lawsonia intracellularis N343   1 1
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   10 10
No Yes Desulfovibrio vulgaris RCH1   7 6
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   6 6
No Yes Desulfovibrio vulgaris str. Hildenborough   7 6
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   7 7
No Yes Desulfovibrio desulfuricans ND132   8 8
No Yes Geobacter sp. M18   3 3
No Yes Geobacter sulfurreducens PCA   3 3
No Yes Anaeromyxobacter sp. K   3 3
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Burkholderia phenoliruptrix BR3459a   2 2
No Yes Burkholderia sp. KJ006   2 2
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   2 2
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   2 2
No Yes Zymomonas mobilis subsp. mobilis ZM4   2 2
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   2 2
No Yes Rhodobacter sphaeroides KD131   2 2
No Yes Rhodobacter sphaeroides ATCC 17025   3 3
No Yes Rhodobacter sphaeroides 2.4.1   2 2
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   4 4
No Yes Rhodospirillum rubrum ATCC 11170   6 6
No Yes Gluconacetobacter diazotrophicus PAl 5   2 2
No Yes Sinorhizobium fredii USDA 257   2 2
No Yes Sinorhizobium fredii HH103   2 2
No Yes Sinorhizobium meliloti GR4   2 2
No Yes Sinorhizobium meliloti Rm41   2 2
No Yes Sinorhizobium meliloti SM11   2 2
No Yes Sinorhizobium meliloti BL225C   2 2
No Yes Sinorhizobium meliloti 1021   2 2
No Yes Rhizobium etli CFN 42   2 2
No Yes Rhizobium etli bv. mimosae str. Mim1   2 2
No Yes Rhizobium tropici CIAT 899   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Mesorhizobium australicum WSM2073   2 2
No Yes Rhodopseudomonas palustris DX-1   4 4
No Yes Rhodopseudomonas palustris TIE-1   5 5
No Yes Rhodopseudomonas palustris HaA2   4 4
No Yes Rhodopseudomonas palustris BisB5   4 4
No Yes Rhodopseudomonas palustris BisB18   5 5
No Yes Rhodopseudomonas palustris CGA009   8 8
No Yes Bradyrhizobium sp. S23321   2 2
No Yes Bradyrhizobium sp. BTAi1   2 2
No Yes Bradyrhizobium oligotrophicum S58   2 2
No Yes Bradyrhizobium japonicum USDA 6   2 2
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   4 4
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Thioflavicoccus mobilis 8321   7 7
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   3 3
No Yes Dickeya dadantii 3937   3 3
No Yes Klebsiella oxytoca KCTC 1686   3 3
No Yes Klebsiella pneumoniae 342   3 3
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Azotobacter vinelandii CA6   8 8
No Yes Azotobacter vinelandii CA   8 8
No Yes Pseudomonas stutzeri DSM 4166   5 5
No Yes Caldisphaera lagunensis DSM 15908   3 3
No Yes Aeropyrum camini SY1 = JCM 12091   1 1
No Yes Sulfolobus islandicus LAL14/1   3 3
No Yes Sulfolobus islandicus REY15A   3 3
No Yes Sulfolobus islandicus HVE10/4   3 3
No Yes Sulfolobus islandicus Y.G.57.14   3 3
No Yes Sulfolobus islandicus L.S.2.15   3 3
No Yes Sulfolobus islandicus M.16.27   3 3
No Yes Sulfolobus islandicus M.14.25   3 3
No Yes Sulfolobus islandicus M.16.4   3 3
No Yes Sulfolobus islandicus L.D.8.5   3 3
No Yes Sulfolobus solfataricus 98/2   2 2
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Methanomethylovorans hollandica DSM 15978   3 3
No Yes Methanolobus psychrophilus R15   3 3
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   3 3
No Yes Thermococcus sp. AM4   5 5
No Yes Thermococcus sp. CL1   4 4
No Yes Thermococcus litoralis DSM 5473   4 4
No Yes Pyrococcus sp. NA2   4 4
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   4 4
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   2 2
No Yes Ferroplasma acidarmanus fer1   1 1
No Yes Methanococcus maripaludis X1   5 5
No Yes Methanococcus maripaludis C6   5 5
No Yes Methanococcus maripaludis C7   5 5
No Yes Methanococcus maripaludis S2   5 5
No Yes Methanobacterium sp. SWAN-1   4 4
No Yes 1_050719N (meta-genome)   14 14
No Yes 2_050719S (meta-genome)   8 8
No Yes 3_050719R (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   10 10
No Yes 5_050719P (meta-genome)   3 3
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   4 4
No Yes Bath Hot Springs, filamentous community (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   9 9
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   17 17
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   4 4
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   7 7
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   24 24
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   9 9
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   3 3
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   22 22
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   19 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   27 27
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   11 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   14 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   22 22
No Yes Human Gut Community Subject 7 (meta-genome)   5 5
No Yes Human Gut Community Subject 8 (meta-genome)   4 4
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 5
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   29 29
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   14 14
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   3 3
No Yes NCBI 2017_08 genome   14425 14396
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   6 6
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   28 28
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   17 17
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   24 24
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   8 8
No Yes Sludge/US, Jazz Assembly (meta-genome)   5 5
No Yes Sludge/US, Phrap Assembly (meta-genome)   9 9
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   91 91
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   45 45
No Yes STRING v9.0.5 (STRING)   765 762
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   10174 10131
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   50 50
No Yes Global Ocean Sampling Expedition (GOS)   29 28
No Yes NCBI plasmid sequences (Plasmids)   65 62
No Yes NCBI viral sequences (Viral)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   14 14
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   38 38
No Yes TargetDB (Targets)   27 26

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