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Chitinase insertion domain superfamily domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   61519 61519
No Yes Homo sapiens 76_38 Human 20 20
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 4 4
No Yes Gorilla gorilla 76_3.1 Western gorilla 8 8
No Yes Pongo abelii 76_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 5 5
No Yes Papio anubis 76 Olive baboon 8 8
No Yes Macaca mulatta 76_1 Rhesus monkey 13 13
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 12 12
No Yes Otolemur garnettii 76_3 Small-eared galago 7 7
No Yes Microcebus murinus 76_1 Gray mouse lemur 4 4
No Yes Rattus norvegicus 76_5.0 Norway rat 6 6
No Yes Mus musculus 76_38 House mouse 13 13
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 5 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 76_2 Rabbit 4 4
No Yes Ochotona princeps 76 American pika 4 4
No Yes Tupaia belangeri 76 Northern tree shrew 4 4
No Yes Sus scrofa 76_10.2 Pig 6 6
No Yes Bos taurus 76_3.1 Cattle 7 7
No Yes Ovis aries 76_3.1 Sheep 9 9
No Yes Vicugna pacos 76_1 Alpaca 4 4
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 4 4
No Yes Ailuropoda melanoleuca 76_1 Giant panda 4 4
No Yes Canis familiaris 76_3.1 Dog 3 3
No Yes Felis catus 76_6.2 Domestic cat 5 4
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 5 5
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 3 3
No Yes Procavia capensis 76_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 76_3 African savanna elephant 6 6
No Yes Echinops telfairi 76 Small Madagascar hedgehog 4 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 6 5
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 5 5
No Yes Macropus eugenii 76_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 9 9
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 9 9
No Yes Ornithorhynchus anatinus 76_5 Platypus 6 6
No Yes Saccoglossus kowalevskii v3.0   3 3
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 4 4
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 5 5
No Yes Anolis carolinensis 76_2.0 Green anole 9 9
No Yes Xenopus laevis African clawed frog 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 4 4
No Yes Latimeria chalumnae 76_1 Coelacanth 6 5
No Yes Lepisosteus oculatus 76 Spotted gar 7 6
No Yes Gadus morhua 76_1 Atlantic cod 7 7
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 6 6
No Yes Takifugu rubripes 76_4 Torafugu 8 8
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 12 12
No Yes Oryzias latipes 76_1 Japanese medaka 6 6
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 9 9
No Yes Astyanax mexicanus 76 Mexican tetra 6 6
No Yes Danio rerio 76_9 Zebrafish 6 6
No Yes Oikopleura dioica   5 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Adineta vaga   41 37
No Yes Octopus bimaculoides 280   28 28
No Yes Crassostrea gigas 22 Pacific oyster 17 14
No Yes Lottia gigantea Owl limpet 24 22
No Yes Helobdella robusta   4 3
No Yes Capitella sp. I   10 10
No Yes Danaus plexippus OGS1.0 Monarch butterfly 17 12
No Yes Heliconius melpomene Postman butterfly 15 12
No Yes Bombyx mori Domestic silkworm 14 10
No Yes Nasonia vitripennis Jewel wasp 12 11
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 50 38
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 14 9
No Yes Linepithema humile v1.1 Argentine ant 13 8
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 12 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 12 7
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 11 8
No Yes Atta cephalotes v1.1   11 8
No Yes Camponotus floridanus v3.3 Florida carpenter ant 14 9
No Yes Lucilia cuprina Australian sheep blowfly 25 14
No Yes Drosophila grimshawi 1.3   22 20
No Yes Drosophila willistoni 1.3   20 16
No Yes Drosophila pseudoobscura 2.13   22 18
No Yes Drosophila persimilis 1.3   21 19
No Yes Drosophila suzukii   20 13
No Yes Drosophila yakuba 1.3   21 16
No Yes Drosophila simulans 1.3   12 10
No Yes Drosophila sechellia 1.3   19 17
No Yes Drosophila melanogaster 76_5 Fruit fly 41 31
No Yes Drosophila erecta 1.3   20 16
No Yes Drosophila ananassae 1.3   20 16
No Yes Drosophila virilis 1.2   21 19
No Yes Drosophila mojavensis 1.3   20 16
No Yes Megaselia scalaris 22   7 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 25 20
No Yes Culex pipiens quinquefasciatus Southern house mosquito 26 21
No Yes Anopheles darlingi 22 American malaria mosquito 29 20
No Yes Anopheles gambiae 49_3j African malaria mosquito 27 19
No Yes Tribolium castaneum 3.0 Red flour beetle 26 20
No Yes Pediculus humanus corporis (Early assembly) Human body louse 12 7
No Yes Acyrthosiphon pisum Pea aphid 10 6
No Yes Rhodnius prolixus 22   15 9
No Yes Daphnia pulex Common water flea 27 23
No Yes Strigamia maritima 22   13 12
No Yes Sarcoptes scabiei   8 7
No Yes Tetranychus urticae Two-spotted spider mite 17 16
No Yes Ixodes scapularis (Preliminary) Black-legged tick 34 33
No Yes Pristionchus pacificus   5 5
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Meloidogyne hapla   2 2
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 9 9
No Yes Caenorhabditis japonica   6 6
No Yes Caenorhabditis brenneri   12 12
No Yes Caenorhabditis remanei   11 11
No Yes Caenorhabditis elegans 76_235 Roundworm 8 8
No Yes Caenorhabditis briggsae 2   9 9
No Yes Trichinella spiralis 22   4 3
No Yes Mnemiopsis leidyi Sea walnut 3 3
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 5 5
No Yes Hydra vulgaris   6 6
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   14 14
No Yes Mortierella verticillata NRRL 6337   6 6
No Yes Phycomyces blakesleeanus   4 4
No Yes Rhizopus oryzae RA 99-880   8 8
No Yes Mucor circinelloides   9 9
No Yes Rhizomucor miehei CAU432   6 6
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   7 7
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   6 6
No Yes Melampsora laricis-populina   6 6
No Yes Rhodotorula graminis WP1 v1.0   2 2
No Yes Sporobolomyces roseus IAM 13481   4 4
No Yes Microbotryum violaceum 22   6 6
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Piloderma croceum F 1598 v1.0   2 2
No Yes Serpula lacrymans var. lacrymans S7.9   5 5
No Yes Coniophora puteana   8 8
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   6 6
No Yes Pisolithus microcarpus 441 v1.0   3 3
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   5 5
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Pleurotus ostreatus Oyster mushroom 7 7
No Yes Amanita thiersii Skay4041 v1.0   6 6
No Yes Amanita muscaria Koide v1.0 Fly agaric 7 7
No Yes Galerina marginata v1.0   8 8
No Yes Hebeloma cylindrosporum h7 v2.0   4 4
No Yes Laccaria bicolor S238N-H82   6 6
No Yes Agaricus bisporus var. bisporus   5 5
No Yes Schizophyllum commune   9 9
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 4
No Yes Heterobasidion annosum   4 4
No Yes Gloeophyllum trabeumv1.0   4 4
No Yes Punctularia strigosozonata v1.0   5 5
No Yes Sebacina vermifera MAFF 305830 v1.0   3 3
No Yes Fomitiporia mediterranea v1.0   6 6
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Postia placenta   7 7
No Yes Wolfiporia cocos MD-104 SS10 v1.0   4 4
No Yes Fomitopsis pinicolav1.0   8 7
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   7 7
No Yes Phanerochaete chrysosporium RP-78 2.1   4 4
No Yes Dichomitus squalens   4 4
No Yes Trametes versicolor v1.0   5 5
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   8 8
No Yes Apiospora montagnei NRRL 25634 v1.0   12 12
No Yes Magnaporthe poae ATCC 64411 22   10 10
No Yes Magnaporthe grisea 70-15   8 8
No Yes Podospora anserina   14 14
No Yes Sporotrichum thermophile ATCC 42464   5 5
No Yes Thielavia terrestris NRRL 8126   9 9
No Yes Chaetomium globosum CBS 148.51   11 11
No Yes Neurospora tetrasperma   6 6
No Yes Neurospora discreta FGSC 8579   5 5
No Yes Neurospora crassa OR74A   7 7
No Yes Cryphonectria parasitica Chestnut blight fungus 3 3
No Yes Verticillium albo-atrum VaMs.102   9 9
No Yes Verticillium dahliae VdLs.17   12 12
No Yes Acremonium alcalophilumv 1.0   11 11
No Yes Glomerella graminicola 22   11 11
No Yes Fusarium graminearum   13 13
No Yes Nectria haematococca mpVI   19 19
No Yes Fusarium oxysporum f. sp. lycopersici 4286   20 20
No Yes Fusarium verticillioides 7600   13 13
No Yes Trichoderma asperellum CBS 433.97 v1.0   11 11
No Yes Trichoderma atroviride   12 12
No Yes Trichoderma citrinoviride v1.0   7 7
No Yes Trichoderma reesei 1.2   8 8
No Yes Trichoderma virens Gv29-8   17 17
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   8 8
No Yes Trichoderma harzianum CBS 226.95 v1.0   16 16
No Yes Amorphotheca resinae v1.0 Creosote fungus 6 6
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   9 9
No Yes Blumeria graminis 22   3 3
No Yes Didymella exigua CBS 183.55 v1.0   9 9
No Yes Leptosphaeria maculans 22   5 5
No Yes Setosphaeria turcica v1.0   7 7
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   11 11
No Yes Cochliobolus victoriae FI3 v1.0   12 12
No Yes Cochliobolus carbonum 26-R-13 v1.0   11 11
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 12 12
No Yes Alternaria brassicicola   6 6
No Yes Cochliobolus lunatus m118 v2.0   10 10
No Yes Pyrenophora teres f. teres 22   7 7
No Yes Pyrenophora tritici-repentis   7 7
No Yes Stagonospora nodorum   10 10
No Yes Mycosphaerella graminicola IPO323   6 6
No Yes Zasmidium cellare ATCC 36951 v1.0   12 12
No Yes Dothistroma septosporum   4 4
No Yes Septoria musiva v1.0   3 3
No Yes Mycosphaerella fijiensis CIRAD86   5 5
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   3 3
No Yes Paracoccidioides brasiliensis Pb18   2 2
No Yes Coccidioides posadasii RMSCC 3488   5 5
No Yes Coccidioides immitis RS   6 6
No Yes Ajellomyces dermatitidis SLH14081   5 5
No Yes Histoplasma capsulatum class NAmI strain WU24   5 5
No Yes Microsporum canis CBS 113480   14 14
No Yes Trichophyton equinum CBS 127.97   5 5
No Yes Trichophyton verrucosum HKI 0517   8 8
No Yes Arthroderma benhamiae CBS 112371   10 10
No Yes Trichophyton tonsurans CBS 112818   7 7
No Yes Trichophyton rubrum CBS 118892   9 9
No Yes Uncinocarpus reesii 1704   10 10
No Yes Aspergillus zonatus v1.0   6 6
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 4
No Yes Penicillium chrysogenum v1.0   7 7
No Yes Aspergillus acidus v1.0   13 13
No Yes Aspergillus fumigatus Af293   10 10
No Yes Aspergillus brasiliensis v1.0   13 13
No Yes Aspergillus nidulans FGSC A4   13 13
No Yes Aspergillus sydowii v1.0   13 13
No Yes Aspergillus versicolor v1.0   15 15
No Yes Aspergillus glaucus   8 8
No Yes Aspergillus carbonarius ITEM 5010   12 12
No Yes Neosartorya fischeri NRRL 181   13 13
No Yes Aspergillus terreus NIH2624   15 15
No Yes Aspergillus tubingensis v1.0   12 12
No Yes Aspergillus wentii v1.0   8 8
No Yes Aspergillus oryzae RIB40   10 10
No Yes Aspergillus niger 22   9 9
No Yes Aspergillus niger ATCC 1015   7 7
No Yes Aspergillus flavus NRRL3357   9 9
No Yes Aspergillus clavatus NRRL 1   7 7
No Yes Penicillium marneffei ATCC 18224   14 14
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida albicans SC5314   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   2 2
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   2 2
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   6 6
No Yes Spizellomyces punctatus DAOM BR117   3 3
No Yes Dictyostelium purpureum   6 6
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   5 5
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   8 8
No Yes Pinus taeda Loblolly pine 10 10
No Yes Picea abies Norway spruce 4 4
No Yes Eucalyptus grandis v201 Rose gum 20 20
No Yes Theobroma cacao B97-61/B2 v1 Cacao 9 9
No Yes Gossypium raimondii v221   16 16
No Yes Citrus clementina v165   13 13
No Yes Citrus sinensis v154 Sweet orange 16 16
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 3 3
No Yes Capsella rubella v183   5 5
No Yes Arabidopsis lyrata Lyrate rockcress 3 3
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 8 8
No Yes Phaseolus vulgaris v186 French bean 4 4
No Yes Glycine max v109 Soybean 6 6
No Yes Cucumis sativus v122 Cucumber 5 5
No Yes Fragaria vesca Wild strawberry 8 6
No Yes Malus domestica v196 Apple 11 11
No Yes Prunus persica v139 Peach 9 9
No Yes Linum usitatissimum v200 Flax 10 10
No Yes Manihot esculenta v147 Cassava 5 5
No Yes Populus trichocarpa v156 Black cottonwood 9 9
No Yes Vitis vinifera Wine grape 9 8
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 4 4
No Yes Solanum tuberosum Potato 4 4
No Yes Actinidia chinensis Hongyang   6 6
No Yes Aquilegia coerulea v195   3 3
No Yes Triticum aestivum 22 Bread wheat 2 2
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 2 2
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 3 3
No Yes Oryza punctata 22   2 2
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 3 3
No Yes Panicum virgatum v202 Switchgrass 3 3
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Zea mays subsp. mays Maize 4 4
No Yes Zea mays v181 Maize 3 3
No Yes Sorghum bicolor Sorghum 2 2
No Yes Musa balbisiana Balbis banana 4 4
No Yes Musa acuminata 22 Wild Malaysian banana 3 3
No Yes Amborella trichopoda 22   2 2
No Yes Physcomitrella patens   2 2
No Yes Chlorella variabilis sp. NC64A   2 2
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Phytophthora capsici   1 1
No Yes Thalassiosira pseudonana CCMP1335   9 9
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Emiliania huxleyi CCMP1516   4 4
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Acidothermus cellulolyticus 11B   1 1
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Stackebrandtia nassauensis DSM 44728   3 3
No Yes Thermobifida fusca YX   2 2
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   3 3
No Yes Streptosporangium roseum DSM 43021   6 6
No Yes Kitasatospora setae KM-6054   8 8
No Yes Streptomyces coelicolor A3(2)   4 4
No Yes Streptomyces sp. PAMC26508   3 3
No Yes Streptomyces flavogriseus ATCC 33331   3 3
No Yes Streptomyces sp. SirexAA-E   3 3
No Yes Streptomyces griseus subsp. griseus NBRC 13350   4 4
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   2 2
No Yes Amycolatopsis mediterranei U32   4 4
No Yes Kribbella flavida DSM 17836   3 3
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   2 2
No Yes Micromonospora aurantiaca ATCC 27029   2 2
No Yes Actinoplanes sp. N902-109   3 3
No Yes Actinoplanes sp. SE50/110   4 4
No Yes Actinoplanes missouriensis 431   3 3
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Clostridium cellulolyticum H10   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes Clostridium sp. BNL1100   1 1
No Yes Clostridium beijerinckii NCIMB 8052   2 2
No Yes Clostridium botulinum A str. ATCC 3502   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   2 2
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus atrophaeus 1942   2 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Salinibacter ruber M8   1 1
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Fibrella aestuarina   2 2
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   2 2
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Maribacter sp. HTCC2170   1 1
No Yes Flavobacterium johnsoniae UW101   2 2
No Yes Opitutus terrae PB90-1   1 1
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Spirochaeta thermophila DSM 6192   1 1
No Yes Dictyoglomus turgidum DSM 6724   1 1
No Yes Dictyoglomus thermophilum H-6-12   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   2 2
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Chromobacterium violaceum ATCC 12472   2 2
No Yes Burkholderia xenovorans LB400   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Saccharophagus degradans 2-40   4 3
No Yes Teredinibacter turnerae T7901   1 1
No Yes Cellvibrio japonicus Ueda107   3 3
No Yes Aeromonas veronii B565   3 3
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Vibrio fischeri MJ11   2 2
No Yes Vibrio sp. Ex25   2 2
No Yes Vibrio harveyi ATCC BAA-1116   3 3
No Yes Vibrio parahaemolyticus RIMD 2210633   3 3
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio anguillarum 775   3 3
No Yes Vibrio furnissii NCTC 11218   2 2
No Yes Vibrio vulnificus MO6-24/O   3 3
No Yes Vibrio cholerae O395   3 3
No Yes Photobacterium profundum SS9   2 2
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella denitrificans OS217   2 2
No Yes Shewanella baltica OS185   2 2
No Yes Shewanella woodyi ATCC 51908   2 2
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella violacea DSS12   3 3
No Yes Pseudoalteromonas sp. SM9913   2 2
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Stenotrophomonas maltophilia K279a   2 2
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Photorhabdus asymbiotica   2 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   2 2
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Rahnella sp. Y9602   3 3
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 3
No Yes Serratia sp. AS12   2 2
No Yes Serratia plymuthica AS9   2 2
No Yes Serratia proteamaculans 568   2 2
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   2 2
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   6 6
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Francisella novicida U112   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   3 3
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Natrinema sp. J7-2   2 2
No Yes Halogeometricum borinquense DSM 11551   2 2
No Yes Haloferax mediterranei ATCC 33500   2 2
No Yes Halomicrobium mukohataei DSM 12286   3 3
No Yes Halobacterium salinarum R1   2 2
No Yes Halobacterium sp. NRC-1   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 10 10
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 24 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 29 24
No Yes Ascaris suum Victoria/Ghent Pig roundworm 4 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 8 8
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   2 2
No Yes Coccidioides posadasii str. Silveira   5 5
No Yes Coccidioides immitis RMSCC 3703   5 5
No Yes Coccidioides immitis RMSCC 2394   6 6
No Yes Coccidioides immitis H538.4   4 4
No Yes Ajellomyces dermatitidis ER-3   5 5
No Yes Histoplasma capsulatum H143   5 5
No Yes Histoplasma capsulatum H88   4 4
No Yes Histoplasma capsulatum G186AR   5 5
No Yes Aspergillus fumigatus A1163   9 9
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 9 6
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   3 3
No Yes Streptomyces albus J1074   3 3
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   3 3
No Yes Streptomyces fulvissimus DSM 40593   5 5
No Yes Streptomyces venezuelae ATCC 10712   4 4
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   7 7
No Yes Amycolatopsis mediterranei RB   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis mediterranei S699   4 4
No Yes Amycolatopsis orientalis HCCB10007   5 5
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum B1 str. Okra   2 2
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   2 2
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   2 2
No Yes Clostridium botulinum A str. ATCC 19397   2 2
No Yes Carnobacterium maltaromaticum LMA28   1 1
No Yes Enterococcus mundtii QU 25   2 2
No Yes Paenibacillus sp. Y412MC10   4 4
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Bacillus licheniformis 9945A   2 2
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia sp. YI23   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   4 4
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio fischeri ES114   2 2
No Yes Vibrio sp. EJY3   2 2
No Yes Vibrio parahaemolyticus BB22OP   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   2 2
No Yes Vibrio anguillarum Listonella anguillarum M3   3 3
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   3 3
No Yes Vibrio vulnificus YJ016   3 3
No Yes Vibrio cholerae LMA3984-4   3 3
No Yes Vibrio cholerae M66-2   3 3
No Yes Vibrio cholerae O395   3 3
No Yes Vibrio cholerae IEC224   3 3
No Yes Vibrio cholerae O1 str. 2010EL-1786   3 3
No Yes Vibrio cholerae MJ-1236   3 3
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   3 3
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   2 2
No Yes Shewanella baltica OS678   2 2
No Yes Shewanella baltica OS117   2 2
No Yes Shewanella baltica OS223   2 2
No Yes Shewanella baltica OS195   2 2
No Yes Shewanella baltica OS155   2 2
No Yes Shewanella sp. MR-7   1 1
No Yes Stenotrophomonas maltophilia D457   2 2
No Yes Stenotrophomonas maltophilia JV3   2 2
No Yes Stenotrophomonas maltophilia R551-3   2 2
No Yes Rahnella aquatilis HX2   3 3
No Yes Serratia sp. AS13   2 2
No Yes Serratia plymuthica S13   2 2
No Yes Serratia plymuthica 4Rx13   2 2
No Yes Serratia marcescens WW4   2 2
No Yes Serratia liquefaciens ATCC 27592   2 2
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   2 2
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 2
No Yes Francisella tularensis subsp. mediasiatica FSC147   1 1
No Yes Francisella tularensis subsp. holarctica F92   1 1
No Yes Francisella tularensis subsp. holarctica FTNF002-00   1 1
No Yes Francisella tularensis subsp. holarctica OSU18   1 1
No Yes Francisella tularensis subsp. holarctica LVS   1 1
No Yes Francisella tularensis subsp. holarctica FSC200   1 1
No Yes Francisella tularensis subsp. tularensis TIGB03   1 1
No Yes Francisella tularensis subsp. tularensis TI0902   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   1 1
No Yes Francisella tularensis subsp. tularensis FSC198   1 1
No Yes Francisella tularensis subsp. tularensis SCHU S4   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 21 21
No Yes Homo sapiens (NCBI version) Human 8 8
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 8 8
No Yes Heliconius numata (Incomplete)   13 12
No Yes Loa loa v3.3 (Request) Eye worm 3 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 3 3
No Yes Moniliophthora perniciosa FA553 (Genome survey)   3 3
No Yes Lotus japonicus (Early assembly)   6 6
No Yes Malus x domestica (Duplicate) Apple 11 11
No Yes Ricinus communis (Early assembly) Castor bean 7 7
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   6 6
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 4 4
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 4 4
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   3 3
No Yes Homo sapiens 69_37 Human 5 5
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 4 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 5 5
No Yes Pongo abelii 69_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 5 5
No Yes Macaca mulatta 69_1 Rhesus monkey 5 5
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 6 6
No Yes Otolemur garnettii 69_3 Small-eared galago 6 6
No Yes Microcebus murinus 69_1 Gray mouse lemur 4 4
No Yes Rattus norvegicus 69_3.4 Norway rat 8 8
No Yes Mus musculus 69_38 House mouse 8 8
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 4
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 69_2 Rabbit 4 4
No Yes Ochotona princeps 69 American pika 4 4
No Yes Tupaia belangeri 69 Northern tree shrew 4 4
No Yes Sus scrofa 69_10.2 Pig 6 6
No Yes Bos taurus 69_3.1 Cattle 6 6
No Yes Vicugna pacos 69_1 Alpaca 4 4
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 5 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 4 4
No Yes Ailuropoda melanoleuca 69_1 Giant panda 4 4
No Yes Canis familiaris 69_3.1 Dog 3 3
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 5 5
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 3 3
No Yes Procavia capensis 69_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 69_3 African savanna elephant 6 6
No Yes Echinops telfairi 69 Small Madagascar hedgehog 4 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 4 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 5 5
No Yes Macropus eugenii 69_1.0 Tammar wallaby 3 3
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 8 8
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 9 9
No Yes Ornithorhynchus anatinus 69_5 Platypus 6 6
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 3 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 69_2.0 Green anole 7 7
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 69_1 Coelacanth 4 3
No Yes Gadus morhua 69_1 Atlantic cod 7 7
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 69_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 8 8
No Yes Oryzias latipes 69_1 Japanese medaka 5 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 6 6
No Yes Danio rerio 69_9 Zebrafish 5 5
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 20 16
No Yes Caenorhabditis elegans 69_215 Roundworm 8 8
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes 3_050719R (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   5 5
No Yes Combined (meta-genome)   6 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 4
No Yes Dump bottom (Dump bottom) (meta-genome)   12 12
No Yes Dump top (Dump top) (meta-genome)   5 5
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   7 7
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   10 10
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   14 14
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   34455 33746
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes Protozoadb 2010_08 (Protozoadb)   4 4
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   953 891
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   18197 17352
No Yes Global Ocean Sampling Expedition (GOS)   64 64
No Yes NCBI plasmid sequences (Plasmids)   12 12
No Yes NCBI viral sequences (Viral)   53 53
No Yes PDB chains (SCOP 1.75) (PDB)   39 39
No Yes Protein Data Bank (all PDB sequenc)   341 336
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   768 768
No Yes TargetDB (Targets)   17 17
No Yes The Salmonella enterica Pan-genome (meta-genome)   26 26
No Yes UniProt viral sequences (Viral)   60 60

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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