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7-Fe ferredoxin family domain assignments
in
all genomes

Assignment details

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25 selected genomes have 47 significant domains in 47 proteins.

Showing genomes 1 to 25 of 403
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Caenorhabditis japonica has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
CJA27982   4.19e-26   0.0000965   3-104   7fd1 A:  

Theobroma cacao B97-61/B2 v1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Tc04_g003710   6.51e-16   0.000098   498-554   1jb0 C:  

Medicago truncatula has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Medtr4g006120.1   0.00000000000000113   0.0000948   7-66   1jb0 C:  
Medtr4g050960.1   5.98e-16   0.0000815   7-65   1jb0 C:  
Medtr7g021720.1   0.00000000000000103   0.0000948   7-72   1jb0 C:  
 
Weak hits:
Medtr0002s0170.1   0.00000691   0.00065   60-99   1jb0 C:  
Medtr4g026420.1   0.00000609   0.0021   33-78   1jb0 C:  
Medtr8g066490.1   0.00663   0.084   14-59   1h98 A:  

Triticum urartu 22 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
TRIUR3_02374-P1   0.00000000000000269   0.00008   3-71   1jb0 C:  
TRIUR3_07858-P1   9.23e-16   0.0000815   5-68   1jb0 C:  
 
Weak hits:
TRIUR3_02546-P1   0.00000000000251   0.00011   7-65   1jb0 C:  
TRIUR3_04400-P1   0.000000000000207   0.00018   5-63   1jb0 C:  
TRIUR3_05707-P1   0.000457   0.013   5-37   1jb0 C:  
TRIUR3_07424-P1   0.0000000000000927   0.00013   5-67   1jb0 C:  

Triticum aestivum 22 has 8 significant domains in 8 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Traes_1BS_5197BE764.1   6.44e-16   0.0000944   6-65   1jb0 C:  
Traes_1DL_3A92B17F0.1   9.23e-16   0.0000815   5-68   1jb0 C:  
Traes_2DS_3A92B17F0.1   9.23e-16   0.0000815   5-68   1jb0 C:  
Traes_3B_0DCFCDDEB.1   0.00000000000000279   0.0000861   4-68   1jb0 C:  
Traes_5BL_F350FAA7B.1   0.00000000000000568   0.0001   5-67   1jb0 C:  
Traes_6BS_3A92B17F0.1   9.23e-16   0.0000815   5-68   1jb0 C:  
Traes_6DL_3A92B17F0.1   9.23e-16   0.0000815   5-68   1jb0 C:  
Traes_7BS_EF1042AE9.1   8.68e-16   0.0000815   4-67   1jb0 C:  
 
Weak hits:
Traes_1DL_DD4202DF0.1   0.00000000000000159   0.00011   7-65   1jb0 C:  
Traes_2DL_F82F53782.1   0.0000000000000663   0.00018   7-64   1jb0 C:  
Traes_3B_90D3E8AF4.1   0.0000000000000741   0.00014   6-64   1jb0 C:  
Traes_3DL_00344DC80.1   0.00000103   0.0045   6-30   1jb0 C:  
Traes_3DS_66006930B.1   0.00000364   0.0037   16-41   1jb0 C:  
Traes_3DS_CA5BCFA78.1   0.00000000715   0.003   7-33   1jb0 C:  
Traes_4DL_7AA474747.1   0.00000000568   0.003   7-33   1jb0 C:  
Traes_5BL_68B8353B3.1   0.000628   0.052   1-24   1jb0 C:  
Traes_7AS_EDA7F0F82.1   0.00000000000000688   0.00045   7-64   1jb0 C:  
Traes_7AS_EDA7F0F821.1   0.00000000000000688   0.00045   7-64   1jb0 C:  
Traes_7DS_3AFCA80A1.1   0.00000247   0.0045   9-33   1jb0 C:  

Brachypodium distachyon has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
EG:BRADI1G05756.1   0.0000000000000182   0.0000927   5-67   1jb0 C:  
 
Weak hits:
EG:BRADI3G11420.1   0.00000000000365   0.00016   162-212   1jb0 C:  

Oryza glaberrima has 8 significant domains in 8 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ORGLA03G0394500.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA06G0242500.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA06G0259000.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA06G0271300.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA07G0095000.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA08G0208200.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA10G0159600.1   9.23e-16   0.0000815   5-68   1jb0 C:  
ORGLA11G0196700.1   9.23e-16   0.0000815   5-68   1jb0 C:  
 
Weak hits:
ORGLA05G0037800.1   0.000000000000477   0.077   115-208   1jb0 C:  
ORGLA09G0111600.1   0.0000000000017   0.00013   5-67   1jb0 C:  

Oryza sativa ssp. japonica 5.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
LOC_Os06g46436.1|13106.m10449|protein   9.23e-16   0.0000815   5-68   1jb0 C:  
LOC_Os07g22498.1|13107.m09929|protein   9.23e-16   0.0000815   5-68   1jb0 C:  
LOC_Os10g21406.1|13110.m07734|protein   9.23e-16   0.0000815   5-68   1jb0 C:  

Oryza sativa v193 has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
LOC_Os06g46436.1|PACid:21931760   9.23e-16   0.0000815   5-68   1jb0 C:  
LOC_Os07g22498.1|PACid:21900396   9.23e-16   0.0000815   5-68   1jb0 C:  
LOC_Os10g21406.1|PACid:21882897   9.23e-16   0.0000815   5-68   1jb0 C:  

Panicum virgatum v202 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Pavirv00016748m|PACid:23779661   2.41e-16   0.0000757   5-69   1jb0 C:  
 
Weak hits:
Pavirv00008263m|PACid:23808607   0.000000000000435   0.052   130-222   1jb0 C:  
Pavirv00020460m|PACid:23806687   0.0000000000419   0.041   117-179   1jb0 C:  

Zea mays subsp. mays has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
GRMZM2G096792_P01   0.00000000000000114   0.0000998   7-65   1jb0 C:  

Zea mays v181 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
GRMZM2G096792_T01|PACid:20843756   0.00000000000000114   0.0000998   7-65   1jb0 C:  
GRMZM5G815553_T01|PACid:20871646   0.00000000000000138   0.0000877   7-65   1jb0 C:  
 
Weak hits:
GRMZM2G000781_T01|PACid:20854936   0.00000000000000164   0.00013   7-61   1jb0 C:  
GRMZM2G538198_T01|PACid:20835373   0.000000126   0.004   7-33   1jb0 C:  
GRMZM5G852325_T01|PACid:20831829   0.0000000000000221   0.00017   7-61   1jb0 C:  
GRMZM5G864166_T01|PACid:20852179   0.000000000000173   0.052   118-208   1jb0 C:  

Asterochloris sp. Cgr/DA1pho v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
jgi|Astpho1|32273|e_gw1.00130.105.1   4.19e-16   0.0000833   4-68   1jb0 C:  

Bathycoccus prasinos has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
BathyCg00085   3.5e-16   0.000083   4-61   1jb0 C:  

Cyanidioschyzon merolae strain 10D 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
CMV059CT   2.39e-16   0.0000786   3-71   1jb0 C:  

Cyanidioschyzon merolae has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gnl|CMER|CMV059C   2.39e-16   0.0000786   3-71   1jb0 C:  

Leptolyngbya sp. PCC 7376 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427724687|ref|YP_007071964.1|   8.05e-16   0.0000704   7-66   1jb0 C:  
 
Weak hits:
gi|427723023|ref|YP_007070300.1|   0.00000000000000466   0.019   5-67   1bc6 A:  

Pseudanabaena sp. PCC 7367 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|428216997|ref|YP_007101462.1|   0.00000000000000303   0.0000704   4-69   1jb0 C:  
 
Weak hits:
gi|428216989|ref|YP_007101454.1|   0.0000000000000101   0.029   4-67   1bc6 A:  
gi|428218065|ref|YP_007102530.1|   0.000000000000186   0.068   118-177,230-251   1h98 A:  
gi|428219215|ref|YP_007103680.1|   0.000373   0.087   280-357   1h98 A:  

Acaryochloris marina MBIC11017 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|158334823|ref|YP_001515995.1|   3.98e-16   0.0000568   4-69   1jb0 C:  
 
Weak hits:
gi|158334537|ref|YP_001515709.1|   0.0000000000000051   0.022   1-64   1bc6 A:  
gi|158334815|ref|YP_001515987.1|   0.0000000000162   0.043   73-144   1h98 A:  

Synechocystis sp. PCC 6803 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|16331238|ref|NP_441966.1|   0.00000000000000141   0.0000704   5-69   1jb0 C:  
 
Weak hits:
gi|16330286|ref|NP_441014.1|   0.00000000000000547   0.017   2-67   1bc6 A:  

Thermosynechococcus sp. NK55 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|571026812|ref|YP_008898930.1|   3.27e-16   0.0000568   6-66   1jb0 C:  
 
Weak hits:
gi|571028363|ref|YP_008900483.1|   0.00000000000000776   0.022   4-69   1bc6 A:  

Thermosynechococcus elongatus BP-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|22298556|ref|NP_681803.1|   3.27e-16   0.0000568   6-66   1jb0 C:  
 
Weak hits:
gi|22298130|ref|NP_681377.1|   0.00000000000000544   0.089   203-303   1jb0 C:  
gi|22299637|ref|NP_682884.1|   0.00000000000000901   0.022   4-69   1bc6 A:  

Synechococcus sp. PCC 7502 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|428222162|ref|YP_007106332.1|   1.5e-16   0.0000927   7-65   1jb0 C:  
 
Weak hits:
gi|428221139|ref|YP_007105309.1|   0.000000000000173   0.056   4-64   1bc6 A:  
gi|428221592|ref|YP_007105762.1|   0.0039   0.061   320-354   1h98 A:  
gi|428222841|ref|YP_007107011.1|   0.000000000000257   0.061   75-147   1h98 A:  

Synechococcus sp. PCC 6312 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427714074|ref|YP_007062698.1|   3.27e-16   0.0000568   6-66   1jb0 C:  
 
Weak hits:
gi|427713491|ref|YP_007062115.1|   0.0000000000000154   0.018   1-68   1bc6 A:  
gi|427714637|ref|YP_007063261.1|   3.22e-18   0.054   30-140   1jb0 C:  

Synechococcus sp. CC9311 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|113955567|ref|YP_729370.1|   0.00000000000000117   0.0000861   7-65   1jb0 C:  
 
Weak hits:
gi|113954804|ref|YP_730603.1|   0.00000000000000193   0.036   4-67   1bc6 A:  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
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Select to display   Genome       Domains   Proteins
No Yes ALL   17807 17807
No Yes Caenorhabditis japonica   1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Medicago truncatula Barrel medic 3 3
No Yes Triticum urartu 22   2 2
No Yes Triticum aestivum 22 Bread wheat 8 8
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza glaberrima African rice 8 8
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 3 3
No Yes Oryza sativa v193 Rice 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 2 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   3 3
No Yes Thermus thermophilus HB27   1 1
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes Thiomonas arsenitoxydans   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Bordetella avium 197N   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Methylotenera versatilis 301   1 1
No Yes Methylotenera mobilis JLW8   1 1
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Starkeya novella DSM 506   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium chloromethanicum CM4   2 2
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Pelagibacterium halotolerans B2   1 1
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   1 1
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Saccharophagus degradans 2-40   1 1
No Yes Teredinibacter turnerae T7901   1 1
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Kangiella koreensis DSM 16069   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Marinomonas posidonica IVIA-Po-181   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Chromohalobacter salexigens DSM 3043   1 1
No Yes Halomonas elongata DSM 2581   1 1
No Yes Methylomonas methanica MC09   1 1
No Yes Methylococcus capsulatus str. Bath   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes gamma proteobacterium HdN1   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas sp. VLB120   1 1
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Psychrobacter arcticus 273-4   1 1
No Yes Psychrobacter cryohalolentis K5   1 1
No Yes Moraxella catarrhalis RH4   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter sp. ADP1   1 1
No Yes Methylophaga sp. JAM1   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Thermus oshimai JL-2   2 2
No Yes Thermus thermophilus JL-18   2 2
No Yes Thermus thermophilus SG0.5JP17-16   2 2
No Yes Thermus thermophilus HB8   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Taylorella equigenitalis ATCC 35865   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Glaciecola psychrophila 170   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Spiribacter salinus M19-40   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   2 2
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii SDF   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Methylophaga sp. JAM7   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Guillardia theta (nucleomorph)   1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   5 5
No Yes Dump top (Dump top) (meta-genome)   3 3
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   11949 11949
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   5 5
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   171 171
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   4510 4510
No Yes Global Ocean Sampling Expedition (GOS)   207 207
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   28 28
No Yes Protein Data Bank (all PDB sequenc)   63 63
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   144 144
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   4 4

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