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Vanillyl-alcohol oxidase-like family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 38 significant domains in 38 proteins.

Showing genomes 1 to 25 of 39
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Modestobacter marinus has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|389864628|ref|YP_006366868.1|   2.62e-36   0.000000588   241-526   1e8g A:274-560  
 
Weak hits:
gi|389861991|ref|YP_006364231.1|   4.74e-41   0.045   313-568   1diq A:243-521  
gi|389863206|ref|YP_006365446.1|   0.00000137   0.054   189-227,269-432   1e8g A:274-560  
gi|389863963|ref|YP_006366203.1|   1.55e-55   0.072   257-502   1diq A:243-521  
gi|389866748|ref|YP_006368989.1|   5.89e-60   0.012   197-466   1diq A:243-521  

Actinoplanes sp. N902-109 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|494689572|ref|YP_007955146.1|   1.49e-34   0.000000406   238-513   1e8g A:274-560  
 
Weak hits:
gi|494682594|ref|YP_007948168.1|   1.24e-56   0.042   225-464   1diq A:243-521  
gi|494686851|ref|YP_007952425.1|   7.03e-68   0.056   220-466   1e8g A:274-560  
gi|494686852|ref|YP_007952426.1|   0.00000000000409   0.033   200-369   1diq A:243-521  
gi|494687889|ref|YP_007953463.1|   1.8e-56   0.093   254-498   1diq A:243-521  

Rhodococcus jostii RHA1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
 
Weak hits:
gi|111017367|ref|YP_700339.1|   9.97e-53   0.033   261-504   1diq A:243-521  
gi|111017472|ref|YP_700444.1|   4.09e-55   0.018   222-455   1diq A:243-521  
gi|111018588|ref|YP_701560.1|   2.13e-59   0.067   221-457   1diq A:243-521  
gi|111019973|ref|YP_702945.1|   2.29e-50   0.067   218-453   1diq A:243-521  
gi|111020216|ref|YP_703188.1|   2.13e-54   0.033   222-457   1diq A:243-521  
gi|111020225|ref|YP_703197.1|   8.5e-57   0.02   223-454   1diq A:243-521  
gi|111020376|ref|YP_703348.1|   1.34e-57   0.02   217-454   1diq A:243-521  
gi|111021061|ref|YP_704033.1|   0.00412   0.072   313-468   1diq A:243-521  
gi|111022057|ref|YP_705029.1|   8.18e-41   0.046   299-542   1e8g A:274-560  

Candidatus Nitrospira defluvii has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|302035416|ref|YP_003795738.1|   2.83e-48   0.0000000197   243-513   1diq A:243-521  

Sulfuricurvum kujiense DSM 16994 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|313669348|ref|YP_004049775.1|   1.35e-47   0.00000014   243-514   1diq A:243-521  
 
Weak hits:
gi|313683302|ref|YP_004061040.1|   3.6e-69   0.019   220-459   1diq A:243-521  

Geobacter daltonii FRC-32 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|222053231|ref|YP_002535593.1|   4.58e-32   0.0000019   245-518   1diq A:243-521  
gi|222053232|ref|YP_002535594.1|   1.26e-45   0.000000188   245-526   1diq A:243-521  
 
Weak hits:
gi|222053935|ref|YP_002536297.1|   4.25e-70   0.035   219-458   1diq A:243-521  

Geobacter sp. M21 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|253701448|ref|YP_003022637.1|   5.67e-31   0.00000618   245-515   1diq A:243-521  
gi|253701449|ref|YP_003022638.1|   3.92e-46   0.000000278   245-525   1diq A:243-521  
 
Weak hits:
gi|253699220|ref|YP_003020409.1|   1.29e-67   0.029   219-458   1diq A:243-521  
gi|253699948|ref|YP_003021137.1|   1.14e-68   0.031   219-457   1diq A:243-521  

Geobacter metallireducens GS-15 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404496980|ref|YP_006721086.1|   1.48e-46   0.000000233   245-525   1diq A:243-521  
gi|404496981|ref|YP_006721087.1|   1.29e-32   0.00000154   245-517   1diq A:243-521  
 
Weak hits:
gi|404498094|ref|YP_006722200.1|   1.29e-69   0.033   219-458   1diq A:243-521  

Stigmatella aurantiaca DW4/3-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|310822443|ref|YP_003954801.1|   3.27e-25   0.0000207   231-501   1diq A:243-521  
 
Weak hits:
gi|310818538|ref|YP_003950896.1|   0.00032   0.073   294-427   1e8g A:274-560  
gi|310818702|ref|YP_003951060.1|   1.24e-53   0.087   197-466   1diq A:243-521  
gi|310825136|ref|YP_003957494.1|   5.4e-58   0.0068   190-455   1diq A:243-521  

Thauera sp. MZ1T has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|217970254|ref|YP_002355488.1|   6.32e-47   0.0000000571   244-514   1diq A:243-521  
 
Weak hits:
gi|217969124|ref|YP_002354358.1|   4.09e-25   0.068   676-783   1e8g A:274-560  
gi|217970054|ref|YP_002355288.1|   1.96e-77   0.074   208-478   1diq A:243-521  
gi|217970055|ref|YP_002355289.1|   2.94e-23   0.049   174-355   1e8g A:274-560  

Azoarcus sp. KH32C has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|470171307|ref|YP_007552193.1|   4.14e-50   0.0000000406   244-513   1diq A:243-521  
 
Weak hits:
gi|470169531|ref|YP_007550417.1|   1.14e-75   0.04   208-478   1diq A:243-521  
gi|470169533|ref|YP_007550419.1|   1.06e-24   0.049   174-354   1e8g A:274-560  
gi|470171516|ref|YP_007552402.1|   7.68e-55   0.076   193-467   1diq A:243-521  
gi|470172388|ref|YP_007553274.1|   1.28e-74   0.055   227-467   1diq A:243-521  
gi|470172712|ref|YP_007553598.1|   1.13e-26   0.064   623-791   1e8g A:274-560  

Aromatoleum aromaticum EbN1 has 4 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|56475589|ref|YP_157178.1|   7.19e-20   0.0000766   313-547   1e8g A:274-560  
gi|56475596|ref|YP_157185.1|   1.87e-37   0.0000388   235-505   1diq A:243-521  
gi|56477215|ref|YP_158804.1|   1.05e-50   0.000000000391   245-515   1diq A:243-521  
gi|56478489|ref|YP_160078.1|   1.26e-49   0.0000000318   244-513   1diq A:243-521  
 
Weak hits:
gi|56477982|ref|YP_159571.1|   1.39e-76   0.034   210-480   1diq A:243-521  
gi|56477983|ref|YP_159572.1|   1.22e-21   0.051   131-353   1diq A:243-521  

Burkholderia phytofirmans PsJN has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|187923661|ref|YP_001895303.1|   1.42e-39   0.00000371   241-516   1e8g A:274-560  
 
Weak hits:
gi|187921047|ref|YP_001890079.1|   1.8e-77   0.037   205-473   1diq A:243-521  
gi|187921048|ref|YP_001890080.1|   1.96e-16   0.031   139-351   1e8g A:274-560  
gi|187921084|ref|YP_001890116.1|   1.26e-32   0.06   281-532   1diq A:243-521  
gi|187921286|ref|YP_001890318.1|   7.68e-49   0.067   202-470   1e8g A:274-560  
gi|187922725|ref|YP_001894367.1|   1.57e-18   0.067   184-361   1diq A:243-521  
gi|187922726|ref|YP_001894368.1|   1.06e-71   0.015   203-472   1diq A:243-521  

Burkholderia phymatum STM815 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|186476464|ref|YP_001857934.1|   1.66e-35   0.00000707   245-520   1e8g A:274-560  
 
Weak hits:
gi|186470444|ref|YP_001861762.1|   0.00000000000000458   0.031   138-351   1e8g A:274-560  
gi|186470445|ref|YP_001861763.1|   2.94e-79   0.026   204-474   1diq A:243-521  
gi|186473903|ref|YP_001861245.1|   3.43e-48   0.099   196-466   1e8g A:274-560  
gi|186474493|ref|YP_001863464.1|   4.91e-79   0.049   204-474   1diq A:243-521  
gi|186474494|ref|YP_001863465.1|   0.00000000000000641   0.035   137-354   1diq A:243-521  
gi|186477261|ref|YP_001858731.1|   6.87e-72   0.046   243-483   1diq A:243-521  
gi|186477262|ref|YP_001858732.1|   1.23e-72   0.013   207-476   1diq A:243-521  
gi|186477263|ref|YP_001858733.1|   1.96e-16   0.077   183-361   1diq A:243-521  

Burkholderia xenovorans LB400 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|91783028|ref|YP_558234.1|   4.36e-38   0.00000554   244-521   1e8g A:274-560  
 
Weak hits:
gi|91780823|ref|YP_556030.1|   0.0000376   0.084   221-443   1e8g A:274-560  
gi|91781866|ref|YP_557072.1|   2.78e-18   0.06   184-361   1diq A:243-521  
gi|91781867|ref|YP_557073.1|   1.16e-69   0.017   203-472   1diq A:243-521  
gi|91783595|ref|YP_558801.1|   0.000000000000275   0.032   138-351   1e8g A:274-560  
gi|91783596|ref|YP_558802.1|   5.4e-77   0.035   204-473   1diq A:243-521  
gi|91784448|ref|YP_559654.1|   6.87e-56   0.084   196-470   1diq A:243-521  

Burkholderia sp. RPE64 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|507526636|ref|YP_008048259.1|   1.4e-32   0.00000863   250-530   1e8g A:274-560  
 
Weak hits:
gi|507514918|ref|YP_008036535.1|   0.000000000000018   0.063   187-361   1diq A:243-521  
gi|507514919|ref|YP_008036536.1|   6.54e-72   0.022   220-489   1diq A:243-521  
gi|507515632|ref|YP_008037249.1|   9.48e-56   0.045   197-471   1diq A:243-521  
gi|507518354|ref|YP_008039969.1|   1.64e-47   0.03   190-462   1diq A:243-521  
gi|507518698|ref|YP_008040313.1|   1.96e-52   0.05   294-547   1diq A:243-521  
gi|507519127|ref|YP_008040742.1|   1.11e-76   0.05   204-473   1diq A:243-521  
gi|507519128|ref|YP_008040743.1|   0.00000000000000245   0.035   186-353   1e8g A:274-560  
gi|507526108|ref|YP_008047731.1|   0.0000556   0.093   360-454   1diq A:243-521  

Burkholderia sp. CCGE1002 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|295676282|ref|YP_003604806.1|   1.29e-37   0.00000282   242-516   1e8g A:274-560  
 
Weak hits:
gi|295675576|ref|YP_003604100.1|   1.06e-18   0.062   183-361   1diq A:243-521  
gi|295675577|ref|YP_003604101.1|   1.1e-70   0.016   203-472   1diq A:243-521  
gi|295675578|ref|YP_003604102.1|   1.08e-72   0.077   229-469   1diq A:243-521  
gi|295677067|ref|YP_003605591.1|   1.8e-54   0.063   193-470   1diq A:243-521  
gi|295680950|ref|YP_003609524.1|   6.54e-50   0.05   198-470   1diq A:243-521  
gi|295699764|ref|YP_003607657.1|   3.27e-18   0.00052   325-550   1e8g A:274-560  

Polaromonas naphthalenivorans CJ2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|121606726|ref|YP_984055.1|   1.61e-52   0.00000000295   245-515   1diq A:243-521  
 
Weak hits:
gi|121603040|ref|YP_980369.1|   2.09e-21   0.036   130-378   1diq A:243-521  
gi|121603208|ref|YP_980537.1|   1.16e-69   0.052   205-475   1diq A:243-521  
gi|121603689|ref|YP_981018.1|   4.25e-24   0.085   641-746   1e8g A:274-560  
gi|121605665|ref|YP_982994.1|   7.52e-54   0.022   195-271,308-499   1diq A:243-521  

Comamonas testosteroni CNB-2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|264677285|ref|YP_003277191.1|   5.45e-49   0.00000000252   247-514   1diq A:243-521  
 
Weak hits:
gi|264676337|ref|YP_003276243.1|   0.000000000000327   0.066   140-377   1e8g A:274-560  
gi|264680509|ref|YP_003280419.1|   4.91e-70   0.026   221-490   1diq A:243-521  

Achromobacter xylosoxidans A8 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|311107885|ref|YP_003980738.1|   5.01e-29   0.0000381   235-507   1diq A:243-521  
 
Weak hits:
gi|311105105|ref|YP_003977958.1|   2.45e-74   0.029   229-469   1diq A:243-521  
gi|311105107|ref|YP_003977960.1|   1.96e-16   0.064   199-366   1e8g A:274-560  
gi|311107493|ref|YP_003980346.1|   5.07e-54   0.042   231-474   1e8g A:274-560  
gi|311108766|ref|YP_003981619.1|   2.29e-57   0.089   218-469   1diq A:243-521  

Nitrosospira multiformis ATCC 25196 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|82702604|ref|YP_412170.1|   8.5e-51   0.0000000297   243-513   1diq A:243-521  
 
Weak hits:
gi|82701327|ref|YP_410893.1|   5.49e-61   0.016   213-477   1diq A:243-521  

Nitrosomonas eutropha C91 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|114331641|ref|YP_747863.1|   9.37e-50   0.00000000216   246-515   1diq A:243-521  
 
Weak hits:
gi|114330650|ref|YP_746872.1|   4.36e-17   0.0034   250-360,404-531   1diq A:243-521  
gi|114331857|ref|YP_748079.1|   1.06e-78   0.029   189-458   1diq A:243-521  
gi|114331858|ref|YP_748080.1|   4.58e-17   0.056   214-364   1diq A:243-521  
gi|114332345|ref|YP_748567.1|   8.99e-57   0.032   223-456   1diq A:243-521  

Nitrosomonas europaea ATCC 19718 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|30248750|ref|NP_840820.1|   1.83e-50   0.0000000297   243-513   1diq A:243-521  
 
Weak hits:
gi|30248683|ref|NP_840753.1|   1.52e-17   0.056   169-359   1diq A:243-521  
gi|30248684|ref|NP_840754.1|   1.8e-81   0.079   189-458   1diq A:243-521  
gi|30249012|ref|NP_841082.1|   3.11e-59   0.023   222-455   1diq A:243-521  
gi|30250169|ref|NP_842239.1|   1.26e-17   0.00088   248-365,413-541   1diq A:243-521  

Novosphingobium sp. PP1Y has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|334140685|ref|YP_004533887.1|   2.18e-28   0.0000297   240-507   1e8g A:274-560  
gi|334141041|ref|YP_004534247.1|   5.23e-44   0.00000135   239-516   1e8g A:274-560  
gi|334142543|ref|YP_004535751.1|   5.23e-44   0.00000135   239-516   1e8g A:274-560  
 
Weak hits:
gi|334141038|ref|YP_004534244.1|   0.0000000000108   0.00032   224-401   1e8g A:274-560  
gi|334142405|ref|YP_004535613.1|   2.29e-51   0.034   194-473   1diq A:243-521  
gi|334142546|ref|YP_004535754.1|   1.02e-18   0.0003   224-485   1e8g A:274-560  

Novosphingobium aromaticivorans DSM 12444 has 6 significant domains in 6 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|146275485|ref|YP_001165646.1|   2.78e-44   0.00000178   235-512   1e8g A:274-560  
gi|146275705|ref|YP_001165865.1|   1.07e-48   0.0000000204   254-524   1diq A:243-521  
gi|87199511|ref|YP_496768.1|   4.14e-40   0.000000669   239-513   1e8g A:274-560  
gi|87199669|ref|YP_496926.1|   2.4e-36   0.000002   274-541   1diq A:243-521  
gi|87200889|ref|YP_498146.1|   1.24e-28   0.0000247   244-516   1e8g A:274-560  
gi|87200974|ref|YP_498231.1|   7.41e-38   0.00000131   271-541   1diq A:243-521  
 
Weak hits:
gi|146275489|ref|YP_001165650.1|   9.81e-25   0.00014   224-486   1e8g A:274-560  
gi|87198838|ref|YP_496095.1|   5.4e-67   0.074   237-475   1diq A:243-521  

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Select to display   Genome       Domains   Proteins
No Yes ALL   2114 2114
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Daldinia eschscholzii EC12 v1.0   2 2
No Yes Thielavia terrestris NRRL 8126   3 3
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   3 3
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus wentii v1.0   2 2
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Modestobacter marinus   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Sulfuricurvum kujiense DSM 16994   1 1
No Yes Geobacter daltonii FRC-32   2 2
No Yes Geobacter sp. M21   2 2
No Yes Geobacter metallireducens GS-15   2 2
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Thauera sp. MZ1T   1 1
No Yes Azoarcus sp. KH32C   1 1
No Yes Aromatoleum aromaticum EbN1   4 4
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Polaromonas naphthalenivorans CJ2   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Nitrosomonas eutropha C91   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Novosphingobium sp. PP1Y   3 3
No Yes Novosphingobium aromaticivorans DSM 12444   6 6
No Yes Sphingobium sp. SYK-6   3 3
No Yes Oceanimonas sp. GK1   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1003   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Thioflavicoccus mobilis 8321   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   776 776
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   3 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   32 32
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   910 910
No Yes Global Ocean Sampling Expedition (GOS)   3 3
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   11 11
No Yes Protein Data Bank (all PDB sequenc)   43 43
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   141 141

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