Select to display | Genome | | Domains | Proteins |
No Yes | ALL | | 4966 | 4966 |
No Yes | Halanaerobium hydrogeniformans | | 2 | 1 |
No Yes | Isosphaera pallida ATCC 43644 | | 2 | 1 |
No Yes | Planctomyces brasiliensis DSM 5305 | | 2 | 1 |
No Yes | Planctomyces limnophilus DSM 3776 | | 2 | 1 |
No Yes | Rhodopirellula baltica SH 1 | | 2 | 1 |
No Yes | Pirellula staleyi DSM 6068 | | 2 | 1 |
No Yes | Anaerobaculum mobile DSM 13181 | | 2 | 1 |
No Yes | Candidatus Methylomirabilis oxyfera | | 2 | 1 |
No Yes | Azoarcus sp. KH32C | | 2 | 1 |
No Yes | Methylibium petroleiphilum PM1 | | 2 | 1 |
No Yes | Rubrivivax gelatinosus IL144 | | 2 | 1 |
No Yes | Leptothrix cholodnii SP-6 | | 2 | 1 |
No Yes | Burkholderia phymatum STM815 | | 4 | 2 |
No Yes | Burkholderia xenovorans LB400 | | 2 | 1 |
No Yes | Burkholderia sp. RPE64 | | 2 | 1 |
No Yes | Burkholderia sp. CCGE1002 | | 2 | 1 |
No Yes | Variovorax paradoxus S110 | | 2 | 1 |
No Yes | Methylotenera versatilis 301 | | 2 | 1 |
No Yes | Methylotenera mobilis JLW8 | | 2 | 1 |
No Yes | Methylovorus sp. MP688 | | 2 | 1 |
No Yes | Methylovorus glucosetrophus SIP3-4 | | 2 | 1 |
No Yes | Methylobacillus flagellatus KT | | 2 | 1 |
No Yes | Azospirillum lipoferum 4B | | 4 | 2 |
No Yes | Azospirillum brasilense Sp245 | | 2 | 1 |
No Yes | Granulibacter bethesdensis CGDNIH1 | | 2 | 1 |
No Yes | Starkeya novella DSM 506 | | 2 | 1 |
No Yes | Xanthobacter autotrophicus Py2 | | 2 | 1 |
No Yes | Methylobacterium chloromethanicum CM4 | | 2 | 1 |
No Yes | Methylobacterium extorquens AM1 | | 2 | 1 |
No Yes | Methylobacterium sp. 4-46 | | 2 | 1 |
No Yes | Methylobacterium populi BJ001 | | 2 | 1 |
No Yes | Methylobacterium nodulans ORS 2060 | | 2 | 1 |
No Yes | Methylobacterium radiotolerans JCM 2831 | | 2 | 1 |
No Yes | Mesorhizobium ciceri biovar biserrulae WSM1271 | | 2 | 1 |
No Yes | Methylocella silvestris BL2 | | 2 | 1 |
No Yes | Hyphomicrobium sp. MC1 | | 2 | 1 |
No Yes | Hyphomicrobium denitrificans ATCC 51888 | | 2 | 1 |
No Yes | Methylocystis sp. SC2 | | 2 | 1 |
No Yes | Methylomicrobium alcaliphilum | | 2 | 1 |
No Yes | Methylomonas methanica MC09 | | 2 | 1 |
No Yes | Methylococcus capsulatus str. Bath | | 2 | 1 |
No Yes | Nitrosococcus watsonii C-113 | | 2 | 1 |
No Yes | Nitrosococcus halophilus Nc4 | | 2 | 1 |
No Yes | Nitrosococcus oceani ATCC 19707 | | 2 | 1 |
No Yes | Methylophaga sp. JAM1 | | 2 | 1 |
No Yes | Methanocella arvoryzae MRE50 | | 2 | 1 |
No Yes | Methanocella conradii HZ254 | | 2 | 1 |
No Yes | Methanocella paludicola SANAE | | 2 | 1 |
No Yes | Methanosaeta harundinacea 6Ac | | 2 | 1 |
No Yes | Methanosaeta thermophila PT | | 2 | 1 |
No Yes | Methanosaeta concilii GP6 | | 2 | 1 |
No Yes | Methanosalsum zhilinae DSM 4017 | | 2 | 1 |
No Yes | Methanohalobium evestigatum Z-7303 | | 2 | 1 |
No Yes | Methanococcoides burtonii DSM 6242 | | 2 | 1 |
No Yes | Methanosarcina acetivorans C2A | | 2 | 1 |
No Yes | Methanosarcina mazei Go1 | | 2 | 1 |
No Yes | Methanosarcina barkeri str. Fusaro | | 2 | 1 |
No Yes | Methanohalophilus mahii DSM 5219 | | 2 | 1 |
No Yes | Methanosphaerula palustris E1-9c | | 2 | 1 |
No Yes | Methanoregula boonei 6A8 | | 4 | 2 |
No Yes | Methanospirillum hungatei JF-1 | | 2 | 1 |
No Yes | Methanocorpusculum labreanum Z | | 2 | 1 |
No Yes | Methanoplanus petrolearius DSM 11571 | | 4 | 2 |
No Yes | Methanoculleus bourgensis MS2 | | 2 | 1 |
No Yes | Methanoculleus marisnigri JR1 | | 2 | 1 |
No Yes | Methanopyrus kandleri AV19 | | 4 | 2 |
No Yes | Ferroglobus placidus DSM 10642 | | 4 | 2 |
No Yes | Archaeoglobus profundus DSM 5631 | | 2 | 1 |
No Yes | Archaeoglobus veneficus SNP6 | | 4 | 2 |
No Yes | Archaeoglobus fulgidus DSM 4304 | | 4 | 2 |
No Yes | Methanotorris igneus Kol 5 | | 2 | 1 |
No Yes | Methanocaldococcus sp. FS406-22 | | 2 | 1 |
No Yes | Methanocaldococcus fervens AG86 | | 2 | 1 |
No Yes | Methanocaldococcus vulcanius M7 | | 2 | 1 |
No Yes | methanocaldococcus infernus ME | | 2 | 1 |
No Yes | Methanocaldococcus jannaschii DSM 2661 | | 2 | 1 |
No Yes | Methanothermococcus okinawensis IH1 | | 2 | 1 |
No Yes | Methanococcus aeolicus Nankai-3 | | 2 | 1 |
No Yes | Methanococcus maripaludis C5 | | 2 | 1 |
No Yes | Methanococcus voltae A3 | | 2 | 1 |
No Yes | Methanococcus vannielii SB | | 2 | 1 |
No Yes | Methanothermus fervidus DSM 2088 | | 4 | 2 |
No Yes | Methanothermobacter marburgensis str. Marburg | | 4 | 2 |
No Yes | Methanothermobacter thermautotrophicus str. Delta H | | 4 | 2 |
No Yes | Methanosphaera stadtmanae DSM 3091 | | 4 | 2 |
No Yes | Methanobrevibacter sp. AbM4 | | 4 | 2 |
No Yes | Methanobrevibacter ruminantium M1 | | 4 | 2 |
No Yes | Methanobrevibacter smithii ATCC 35061 | | 4 | 2 |
No Yes | Complete genome sequence of Methanobacterium sp. Mb1 | | 4 | 2 |
No Yes | Singulisphaera acidiphila DSM 18658 | | 2 | 1 |
No Yes | Burkholderia phenoliruptrix BR3459a | | 2 | 1 |
No Yes | Burkholderia sp. YI23 | | 2 | 1 |
No Yes | Burkholderia sp. CCGE1003 | | 2 | 1 |
No Yes | Burkholderia sp. CCGE1001 | | 2 | 1 |
No Yes | Variovorax paradoxus B4 | | 2 | 1 |
No Yes | Methylobacterium extorquens DM4 | | 2 | 1 |
No Yes | Methylobacterium extorquens PA1 | | 2 | 1 |
No Yes | Hyphomicrobium nitrativorans NL23 | | 2 | 1 |
No Yes | Hyphomicrobium denitrificans 1NES1 | | 2 | 1 |
No Yes | Methylophaga sp. JAM7 | | 2 | 1 |
No Yes | Methanomethylovorans hollandica DSM 15978 | | 2 | 1 |
No Yes | Methanolobus psychrophilus R15 | | 2 | 1 |
No Yes | Methanosarcina mazei Tuc01 | | 2 | 1 |
No Yes | Methanoregula formicica Methanoregula formicicum SMSP | | 4 | 2 |
No Yes | Archaeoglobus sulfaticallidus PM70-1 | | 4 | 2 |
No Yes | Methanococcus maripaludis X1 | | 2 | 1 |
No Yes | Methanococcus maripaludis C6 | | 2 | 1 |
No Yes | Methanococcus maripaludis C7 | | 2 | 1 |
No Yes | Methanococcus maripaludis S2 | | 2 | 1 |
No Yes | Methanobacterium sp. SWAN-1 | | 4 | 2 |
No Yes | 4_050719Q (meta-genome) | | 2 | 1 |
No Yes | Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome) | | 6 | 3 |
No Yes | Dump bottom (Dump bottom) (meta-genome) | | 2 | 2 |
No Yes | Dump top (Dump top) (meta-genome) | | 2 | 2 |
No Yes | Endophytic microbiome from Rice (meta-genome) | | 2 | 2 |
No Yes | Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) | | 2 | 1 |
No Yes | Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes | | 4 | 2 |
No Yes | Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) | | 1 | 1 |
No Yes | Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) | | 3 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) | | 5 | 4 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) | | 4 | 2 |
No Yes | Human Gut Community Subject 7 (meta-genome) | | 2 | 1 |
No Yes | Human Gut Community Subject 8 (meta-genome) | | 2 | 1 |
No Yes | Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) | | 2 | 2 |
No Yes | Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) | | 39 | 25 |
No Yes | Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) | | 6 | 4 |
No Yes | Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) | | 7 | 4 |
No Yes | Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) | | 5 | 3 |
No Yes | Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) | | 23 | 16 |
No Yes | Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) | | 2 | 2 |
No Yes | Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) | | 5 | 4 |
No Yes | NCBI 2017_08 genome | | 1716 | 858 |
No Yes | simHC - Simulated High Complexity Metagenome (meta-genome) | | 7 | 6 |
No Yes | simLC - Simulated Low Complexity Metagenome (meta-genome) | | 2 | 1 |
No Yes | simMC - Simulated Medium Complexity Metagenome (meta-genome) | | 5 | 4 |
No Yes | Soil microbial communities from Minnesota Farm (meta-genome) | | 3 | 2 |
No Yes | Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) | | 19 | 16 |
No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) | | 5 | 5 |
No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) | | 3 | 3 |
No Yes | Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) | | 3 | 3 |
No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) | | 7 | 4 |
No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) | | 11 | 9 |
No Yes | Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) | | 6 | 3 |
No Yes | STRING v9.0.5 (STRING) | | 110 | 55 |
No Yes | Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) | | 7 | 6 |
No Yes | Uniprot 2018_03 genome | | 2079 | 1061 |
No Yes | Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) | | 15 | 11 |
No Yes | Global Ocean Sampling Expedition (GOS) | | 109 | 68 |
No Yes | NCBI plasmid sequences (Plasmids) | | 12 | 6 |
No Yes | PDB chains (SCOP 1.75) (PDB) | | 6 | 3 |
No Yes | Protein Data Bank (all PDB sequenc) | | 48 | 24 |
No Yes | SCOP2 SCOPe CATH ECOD (all domain sequ) | | 144 | 144 |