Select to display Genome Domains Proteins
No Yes ALL 11446 11446
No Yes Selaginella moellendorffii 4 4
No Yes Pinus taeda Loblolly pine 5 5
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 5 5
No Yes Theobroma cacao B97-61/B2 v1 Cacao 5 5
No Yes Gossypium raimondii v221 6 6
No Yes Citrus clementina v165 5 5
No Yes Citrus sinensis v154 Sweet orange 3 3
No Yes Thellungiella halophila v173 3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 7 7
No Yes Capsella rubella v183 4 4
No Yes Arabidopsis lyrata Lyrate rockcress 3 3
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 10 10
No Yes Phaseolus vulgaris v186 French bean 3 3
No Yes Glycine max v109 Soybean 15 15
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 3 3
No Yes Malus domestica v196 Apple 10 10
No Yes Prunus persica v139 Peach 3 3
No Yes Linum usitatissimum v200 Flax 6 6
No Yes Manihot esculenta v147 Cassava 6 6
No Yes Populus trichocarpa v156 Black cottonwood 5 5
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 6 6
No Yes Solanum lycopersicum v.2.3 Tomato 4 4
No Yes Solanum tuberosum Potato 11 11
No Yes Actinidia chinensis Hongyang 3 3
No Yes Aquilegia coerulea v195 6 6
No Yes Triticum urartu 22 10 9
No Yes Triticum aestivum 22 Bread wheat 33 33
No Yes Aegilops tauschii 22 10 9
No Yes Brachypodium distachyon Stiff brome 6 6
No Yes Oryza barthii 22 African wild rice 6 6
No Yes Oryza meridionalis 22 5 5
No Yes Oryza glumaepatula 22 6 6
No Yes Oryza glaberrima African rice 5 5
No Yes Oryza punctata 22 8 8
No Yes Oryza nivara 22 4 4
No Yes Oryza brachyantha 22 Malo sina 5 5
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 7 7
No Yes Oryza sativa v193 Rice 7 7
No Yes Phyllostachys heterocycla var. pubescens Kikko-chiku 4 4
No Yes Panicum virgatum v202 Switchgrass 4 4
No Yes Setaria italica v164 Foxtail millet 6 6
No Yes Zea mays subsp. mays Maize 4 4
No Yes Zea mays v181 Maize 4 4
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 4 4
No Yes Musa acuminata 22 Wild Malaysian banana 5 5
No Yes Amborella trichopoda 22 2 2
No Yes Physcomitrella patens 28 28
No Yes Coccomyxa subellipsoidea sp. C-169 v2 1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0 1 1
No Yes Chlorella variabilis sp. NC64A 2 2
No Yes Chlorella vulgaris 1 1
No Yes Volvox carteri f. nagariensis 5 5
No Yes Volvox carteri v199 9 9
No Yes Chlamydomonas reinhardtii 4.0 2 2
No Yes Ostreococcus sp. RCC809 3 3
No Yes Ostreococcus lucimarinus CCE9901 3 3
No Yes Ostreococcus tauri 3 3
No Yes Bathycoccus prasinos 3 3
No Yes Micromonas sp. RCC299 2 2
No Yes Micromonas pusilla CCMP1545 v3.0 2 2
No Yes Cyanidioschyzon merolae strain 10D 22 1 1
No Yes Cyanidioschyzon merolae 1 1
No Yes Bigelowiella natans CCMP2755 22 2 2
No Yes Leptolyngbya sp. PCC 7376 5 2
No Yes Pseudanabaena sp. PCC 7367 5 2
No Yes Acaryochloris marina MBIC11017 8 4
No Yes Synechocystis sp. PCC 6803 5 2
No Yes Thermosynechococcus sp. NK55 5 2
No Yes Thermosynechococcus elongatus BP-1 5 2
No Yes Synechococcus sp. PCC 7502 6 3
No Yes Synechococcus sp. PCC 6312 5 2
No Yes Synechococcus sp. CC9311 1 1
No Yes Synechococcus elongatus PCC 7942 4 2
No Yes Prochlorococcus marinus str. MIT 9515 1 1
No Yes Microcoleus sp. PCC 7113 6 4
No Yes Trichodesmium erythraeum IMS101 6 3
No Yes Geitlerinema sp. PCC 7407 5 3
No Yes Cyanothece sp. PCC 8802 5 2
No Yes Gloeocapsa sp. PCC 7428 5 3
No Yes Halothece sp. PCC 7418 5 2
No Yes Microcystis aeruginosa NIES-843 5 2
No Yes Gloeobacter violaceus PCC 7421 5 2
No Yes Rivularia sp. PCC 7116 6 3
No Yes Calothrix sp. PCC 7507 5 3
No Yes Anabaena variabilis ATCC 29413 5 3
No Yes 'Nostoc azollae' 0708 5 3
No Yes Nostoc sp. PCC 7107 5 3
No Yes Nostoc punctiforme PCC 73102 6 3
No Yes Nostoc sp. PCC 7120 5 3
No Yes Nostoc sp. PCC 7524 5 3
No Yes Anabaena sp. 90 5 3
No Yes Acidimicrobium ferrooxidans DSM 10331 1 1
No Yes Thermomonospora curvata DSM 43183 1 1
No Yes Pseudonocardia dioxanivorans CB1190 1 1
No Yes Microlunatus phosphovorus NM-1 1 1
No Yes Nocardia cyriacigeorgica GUH-2 1 1
No Yes Meiothermus silvanus DSM 9946 1 1
No Yes Sulfobacillus acidophilus DSM 10332 1 1
No Yes Kyrpidia tusciae DSM 2912 1 1
No Yes Methylacidiphilum infernorum V4 1 1
No Yes Candidatus Methylomirabilis oxyfera 1 1
No Yes Acidithiobacillus ferrivorans SS3 2 2
No Yes Acidithiobacillus caldus SM-1 1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993 2 2
No Yes Azoarcus sp. KH32C 1 1
No Yes Methylibium petroleiphilum PM1 2 2
No Yes Thiomonas arsenitoxydans 1 1
No Yes Thiomonas intermedia K12 1 1
No Yes Rubrivivax gelatinosus IL144 1 1
No Yes Burkholderia phymatum STM815 1 1
No Yes Burkholderia xenovorans LB400 1 1
No Yes Cupriavidus taiwanensis LMG 19424 1 1
No Yes Cupriavidus metallidurans CH34 1 1
No Yes Cupriavidus necator N-1 1 1
No Yes Ralstonia eutropha H16 2 2
No Yes Burkholderia sp. RPE64 1 1
No Yes Burkholderia sp. CCGE1002 1 1
No Yes Variovorax paradoxus S110 1 1
No Yes Advenella kashmirensis WT001 1 1
No Yes Thiobacillus denitrificans ATCC 25259 1 1
No Yes Nitrosospira multiformis ATCC 25196 1 1
No Yes Nitrosomonas sp. Is79A3 2 2
No Yes Nitrosomonas eutropha C91 1 1
No Yes Nitrosomonas europaea ATCC 19718 1 1
No Yes Sideroxydans lithotrophicus ES-1 1 1
No Yes Rhodobacter sphaeroides ATCC 17029 1 1
No Yes Rhodobacter capsulatus SB 1003 1 1
No Yes Paracoccus denitrificans PD1222 1 1
No Yes Rhodospirillum photometricum DSM 122 1 1
No Yes Rhodospirillum centenum SW 2 2
No Yes Azospirillum lipoferum 4B 1 1
No Yes Acidiphilium multivorum AIU301 1 1
No Yes Acidiphilium cryptum JF-5 1 1
No Yes Polymorphum gilvum SL003B-26A1 1 1
No Yes Starkeya novella DSM 506 1 1
No Yes Xanthobacter autotrophicus Py2 1 1
No Yes Sinorhizobium medicae WSM419 1 1
No Yes Sinorhizobium meliloti AK83 1 1
No Yes Mesorhizobium opportunistum WSM2075 1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271 1 1
No Yes Methylocella silvestris BL2 1 1
No Yes Rhodomicrobium vannielii ATCC 17100 1 1
No Yes Oligotropha carboxidovorans OM4 1 1
No Yes Rhodopseudomonas palustris BisA53 1 1
No Yes Nitrobacter winogradskyi Nb-255 2 2
No Yes Nitrobacter hamburgensis X14 3 3
No Yes Bradyrhizobium japonicum USDA 110 1 1
No Yes Bradyrhizobium sp. ORS 278 2 2
No Yes Methylococcus capsulatus str. Bath 1 1
No Yes Halothiobacillus neapolitanus c2 1 1
No Yes Alkalilimnicola ehrlichii MLHE-1 1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7 1 1
No Yes Thioalkalivibrio sp. K90mix 1 1
No Yes Halorhodospira halophila SL1 1 1
No Yes Allochromatium vinosum DSM 180 3 3
No Yes Thiocystis violascens DSM 198 1 1
No Yes Nitrosococcus watsonii C-113 1 1
No Yes Nitrosococcus halophilus Nc4 2 2
No Yes Nitrosococcus oceani ATCC 19707 1 1
No Yes Methylophaga sp. JAM1 1 1
No Yes Thiomicrospira crunogena XCL-2 2 2
No Yes Thioalkalimicrobium cyclicum ALM1 1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 4 4
No Yes Hordeum vulgare 22 Domesticated barley 5 5
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 5
No Yes Chroococcidiopsis thermalis PCC 7203 5 3
No Yes Chamaesiphon minutus PCC 6605 7 3
No Yes Synechocystis sp. PCC 6803 substr. PCC-P 5 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-N 5 2
No Yes Synechocystis sp. PCC 6803 substr. GT-I 5 2
No Yes Synechocystis sp. PCC 6803 5 2
No Yes Cyanobium gracile PCC 6307 1 1
No Yes Dactylococcopsis salina PCC 8305 5 2
No Yes Synechococcus sp. JA-2-3B'a(2-13) 5 2
No Yes Synechococcus sp. JA-3-3Ab 6 3
No Yes Synechococcus sp. CC9902 1 1
No Yes Synechococcus sp. RCC307 1 1
No Yes Synechococcus sp. CC9605 1 1
No Yes Synechococcus sp. WH 8102 1 1
No Yes Synechococcus sp. WH 7803 1 1
No Yes Synechococcus sp. PCC 7002 5 2
No Yes Synechococcus elongatus PCC 6301 4 2
No Yes Prochlorococcus marinus str. NATL1A 1 1
No Yes Prochlorococcus marinus str. MIT 9301 1 1
No Yes Prochlorococcus marinus str. AS9601 1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375 1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986 1 1
No Yes Prochlorococcus marinus str. MIT 9215 1 1
No Yes Prochlorococcus marinus str. MIT 9211 1 1
No Yes Prochlorococcus marinus str. MIT 9313 1 1
No Yes Prochlorococcus marinus str. MIT 9312 1 1
No Yes Prochlorococcus marinus str. MIT 9303 1 1
No Yes Prochlorococcus marinus str. NATL2A 1 1
No Yes Crinalium epipsammum PCC 9333 5 3
No Yes Oscillatoria nigro-viridis PCC 7112 5 3
No Yes Oscillatoria acuminata PCC 6304 5 3
No Yes Arthrospira platensis NIES-39 4 2
No Yes Cyanothece sp. PCC 7822 5 2
No Yes Cyanothece sp. PCC 7425 6 3
No Yes Cyanothece sp. PCC 7424 5 2
No Yes Cyanothece sp. ATCC 51142 5 2
No Yes Cyanothece sp. PCC 8801 5 2
No Yes Cyanobacterium aponinum PCC 10605 5 2
No Yes Cyanobacterium stanieri PCC 7202 5 2
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS 5 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327 5 2
No Yes Stanieria cyanosphaera PCC 7437 5 2
No Yes Calothrix parietina Calothrix sp. PCC 6303 5 3
No Yes Cylindrospermum stagnale PCC 7417 5 3
No Yes Anabaena cylindrica PCC 7122 5 3
No Yes Thermus oshimai JL-2 1 1
No Yes Sulfobacillus acidophilus TPY 1 1
No Yes Acidithiobacillus ferrooxidans ATCC 23270 2 2
No Yes Burkholderia phenoliruptrix BR3459a 1 1
No Yes Burkholderia sp. YI23 1 1
No Yes Burkholderia sp. CCGE1003 1 1
No Yes Burkholderia sp. CCGE1001 1 1
No Yes Variovorax paradoxus B4 1 1
No Yes Nitrosomonas sp. AL212 2 2
No Yes Sulfuricella denitrificans skB26 1 1
No Yes Rhodobacter sphaeroides KD131 1 1
No Yes Rhodobacter sphaeroides ATCC 17025 2 2
No Yes Rhodobacter sphaeroides 2.4.1 1 1
No Yes Sinorhizobium fredii USDA 257 1 1
No Yes Sinorhizobium fredii HH103 1 1
No Yes Sinorhizobium meliloti 2011 1 1
No Yes Sinorhizobium meliloti GR4 1 1
No Yes Sinorhizobium meliloti Rm41 1 1
No Yes Sinorhizobium meliloti SM11 1 1
No Yes Sinorhizobium meliloti BL225C 1 1
No Yes Sinorhizobium meliloti 1021 1 1
No Yes Oligotropha carboxidovorans OM5 1 1
No Yes Oligotropha carboxidovorans OM5 1 1
No Yes Rhodopseudomonas palustris DX-1 1 1
No Yes Rhodopseudomonas palustris TIE-1 1 1
No Yes Rhodopseudomonas palustris HaA2 1 1
No Yes Rhodopseudomonas palustris BisB5 2 2
No Yes Rhodopseudomonas palustris BisB18 1 1
No Yes Rhodopseudomonas palustris CGA009 1 1
No Yes Bradyrhizobium sp. S23321 1 1
No Yes Bradyrhizobium sp. BTAi1 3 3
No Yes Bradyrhizobium oligotrophicum S58 1 1
No Yes Bradyrhizobium japonicum USDA 6 1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787 1 1
No Yes Thioflavicoccus mobilis 8321 2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 7 7
No Yes Lotus japonicus (Early assembly) 6 6
No Yes Malus x domestica (Duplicate) Apple 10 10
No Yes Ricinus communis (Early assembly) Castor bean 4 4
No Yes Nicotiana benthamiana 0.4.4 (Early draft) 13 12
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 4 4
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 4 4
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Guillardia theta (nucleomorph) 1 1
No Yes Arabidopsis thaliana 10 Thale cress 4 4
No Yes 3_050719R (meta-genome) 1 1
No Yes 4_050719Q (meta-genome) 22 12
No Yes 5_050719P (meta-genome) 8 5
No Yes 7_Oxygen_minimum_layer (meta-genome) 1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 1 1
No Yes Dump bottom (Dump bottom) (meta-genome) 2 2
No Yes Dump top (Dump top) (meta-genome) 2 2
No Yes Endophytic microbiome from Rice (meta-genome) 3 3
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 6 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 17 11
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 13 5
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 3 3
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 2 2
No Yes NCBI 2017_08 genome 3304 2672
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 1 1
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome) 1 1
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome) 1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome) 8 8
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 7 7
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 10 9
No Yes Sludge/Australian, Phrap Assembly (meta-genome) 2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome) 2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 6 6
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 6 6
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 3 3
No Yes STRING v9.0.5 (STRING) 242 187
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 1 1
No Yes Uniprot 2018_03 genome 5001 4346
No Yes Uranium Contaminated Groundwater FW106 (meta-genome) 1 1
No Yes Global Ocean Sampling Expedition (GOS) 119 119
No Yes NCBI plasmid sequences (Plasmids) 18 18
No Yes PDB chains (SCOP 1.75 ) (PDB) 16 16
No Yes Protein Data Bank (all PDB sequenc) 279 279
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 731 731
No Yes TargetDB (Targets) 15 4