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Clostridium neurotoxins, catalytic domain family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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14 selected genomes have 20 significant domains in 20 proteins.


Clostridium tetani E88 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|28373188|ref|NP_783831.1|   8.24e-199   0.000000000215   2-555   1epw A:1-533  

Clostridium botulinum A str. ATCC 3502 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|148378801|ref|YP_001253342.1|   1.41e-193   0.00000000000000109   2-546   3bta A:1-546  
 
Weak hits:
gi|148378800|ref|YP_001253341.1|   8.97e-169   0.00014   1-112,140-509   3bta A:1-546  

Clostridium tetani genome 12124569 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|557606997|ref|YP_008774963.1|   2.93e-199   0.000000000219   2-555   1epw A:1-533  

Clostridium botulinum H04402 065 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387817075|ref|YP_005677419.1|   8.97e-191   0.00000000000000127   3-546   3bta A:1-546  
 
Weak hits:
gi|387817074|ref|YP_005677418.1|   4.58e-170   0.00014   1-112,140-509   3bta A:1-546  

Clostridium botulinum BKT015925 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|331270960|ref|YP_004385671.1|   7.57e-176   0.000000189   2-542   1epw A:1-533  
 
Weak hits:
gi|331270959|ref|YP_004385670.1|   1.3e-160   0.0002   1-112,140-509   3bta A:1-546  

Clostridium botulinum F str. 230613 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384461195|ref|YP_005673790.1|   1.5e-160   0.0000918   1-476   1t3c A:  
gi|384461196|ref|YP_005673791.1|   1.34e-185   0.000000000542   2-532   1t3c A:  

Clostridium botulinum F str. Langeland has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153938941|ref|YP_001390122.1|   1.5e-160   0.0000918   1-476   1t3c A:  
gi|153939808|ref|YP_001390123.1|   1.34e-185   0.000000000542   2-532   1t3c A:  

Clostridium botulinum E3 str. Alaska E43 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|188590132|ref|YP_001920504.1|   4.04e-173   0.00000000064   2-510   1t3c A:  

Clostridium botulinum B1 str. Okra has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|169834607|ref|YP_001693307.1|   5.31e-208   0.00000000000000157   2-533   1epw A:1-533  
 
Weak hits:
gi|169834701|ref|YP_001693308.1|   4.4e-168   0.00014   1-112,140-509   3bta A:1-546  

Clostridium botulinum Ba4 str. 657 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229587275|ref|YP_002860313.1|   1.83e-181   0.000000000000009   2-546   3bta A:1-546  
gi|229587402|ref|YP_002860440.1|   8.06e-208   0.00000000000000225   2-533   1epw A:1-533  
 
Weak hits:
gi|229587276|ref|YP_002860314.1|   1.41e-155   0.00012   1-476   1t3c A:  
gi|229587403|ref|YP_002860441.1|   4.4e-168   0.00014   1-112,140-509   3bta A:1-546  

Clostridium botulinum A2 str. Kyoto has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|226948035|ref|YP_002803126.1|   1.54e-158   0.0001   1-476   1t3c A:  
gi|226948036|ref|YP_002803127.1|   2.38e-189   0.00000000000000262   2-546   3bta A:1-546  

Clostridium botulinum A3 str. Loch Maree has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|169834914|ref|YP_001715702.1|   3.3e-160   0.0000885   1-476   1t3c A:  
gi|169835008|ref|YP_001715703.1|   9.16e-175   0.000000000000031   2-542   3bta A:1-546  

Clostridium botulinum A str. Hall has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153936924|ref|YP_001386738.1|   1.41e-193   0.00000000000000109   2-546   3bta A:1-546  
 
Weak hits:
gi|153935962|ref|YP_001386737.1|   8.97e-169   0.00014   1-112,140-509   3bta A:1-546  

Clostridium botulinum A str. ATCC 19397 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153931567|ref|YP_001383190.1|   1.41e-193   0.00000000000000109   2-546   3bta A:1-546  
 
Weak hits:
gi|153932404|ref|YP_001383189.1|   8.97e-169   0.00014   1-112,140-509   3bta A:1-546  

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Select to display   Genome       Domains   Proteins
No Yes ALL   1093 1093
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   2 2
No Yes Clostridium botulinum F str. Langeland   2 2
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   2 2
No Yes Clostridium botulinum A2 str. Kyoto   2 2
No Yes Clostridium botulinum A3 str. Loch Maree   2 2
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes NCBI 2017_08 genome   273 273
No Yes STRING v9.0.5 (STRING)   16 16
No Yes Uniprot 2018_03 genome   214 214
No Yes NCBI plasmid sequences (Plasmids)   11 11
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   14 14
No Yes Protein Data Bank (all PDB sequenc)   140 134
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   392 392
No Yes UniProt viral sequences (Viral)   4 4

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