SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Zn metallo-beta-lactamase family domain assignments
in
all bacterial and archaeal genomes

Assignment details

(show help)

25 selected genomes have 26 significant domains in 26 proteins.

Showing genomes 1 to 25 of 185
  1 2 3 4 5 6 7 8   Next Last

Bacillus amyloliquefaciens FZB42 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|154685620|ref|YP_001420781.1|   6.81e-43   0.00000095   19-249   2bc2 A:  
 
Weak hits:
gi|154686095|ref|YP_001421256.1|   3.32e-79   0.036   10-424   1dd6 A:  
gi|154686319|ref|YP_001421480.1|   1.78e-39   0.012   10-226   2gmn A:29-292  

Bacillus atrophaeus 1942 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|311068323|ref|YP_003973246.1|   2.66e-30   0.00000555   75-238   2bc2 A:  
 
Weak hits:
gi|311068201|ref|YP_003973124.1|   6.98e-80   0.047   10-424   1dd6 A:  
gi|311068585|ref|YP_003973508.1|   5.46e-40   0.018   10-225   2gmn A:29-292  
gi|311068979|ref|YP_003973902.1|   6.03e-43   0.042   18-310   1sml A:  

Bacillus weihenstephanensis KBAB4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|163941072|ref|YP_001645956.1|   9.57e-41   0.00000000757   46-256   2bc2 A:  
 
Weak hits:
gi|163938741|ref|YP_001643625.1|   1.18e-38   0.051   16-234   1m2x A:  
gi|163940171|ref|YP_001645055.1|   1.07e-35   0.028   24-235   1a7t A:  
gi|163942724|ref|YP_001647608.1|   6.68e-44   0.025   12-227   2gmn A:29-292  
gi|163943215|ref|YP_001642445.1|   6.82e-27   0.029   24-227   2bc2 A:  

Bacillus thuringiensis str. Al Hakam has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|118478708|ref|YP_895859.1|   2.49e-40   0.0000000069   52-262   2bc2 A:  
 
Weak hits:
gi|118477799|ref|YP_894950.1|   2.98e-36   0.041   26-247   1a7t A:  
gi|118480090|ref|YP_897241.1|   2.36e-44   0.028   12-228   2gmn A:29-292  

Bacillus cereus 03BB102 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|225865413|ref|YP_002750791.1|   3.67e-40   0.00000000647   46-256   2bc2 A:  
 
Weak hits:
gi|225864362|ref|YP_002749740.1|   1.7e-36   0.083   24-243   1a7t A:  
gi|225866983|ref|YP_002752361.1|   1.83e-44   0.028   12-228   2gmn A:29-292  

Bacillus anthracis str. A0248 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229603484|ref|YP_002867651.1|   2.36e-41   0.00000000721   45-255   2bc2 A:  
 
Weak hits:
gi|229600542|ref|YP_002869245.1|   1.31e-44   0.032   12-228   2gmn A:29-292  
gi|229601702|ref|YP_002866732.1|   1.7e-36   0.083   24-243   1a7t A:  

Gemmatimonas aurantiaca T-27 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|226228637|ref|YP_002762743.1|   6.16e-37   0.0000424   48-273   1sml A:  
 
Weak hits:
gi|226226861|ref|YP_002760967.1|   4.87e-46   0.034   508-766   1sml A:  
gi|226226943|ref|YP_002761049.1|   3.28e-32   0.09   3-226   1sml A:  
gi|226228451|ref|YP_002762557.1|   1.13e-37   0.0035   14-269   1a7t A:  
gi|226228621|ref|YP_002762727.1|   0.0365   0.028   307-473   1dd6 A:  
gi|226229005|ref|YP_002763111.1|   0.0304   0.058   807-969   1ko3 A:  

Haliscomenobacter hydrossis DSM 1100 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|332668351|ref|YP_004451139.1|   2.84e-37   0.0000029   51-243   1a7t A:  
 
Weak hits:
gi|332662398|ref|YP_004445186.1|   9.34e-38   0.023   17-271   1x8h A:  

Niastella koreensis GR20-10 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|375146110|ref|YP_005008551.1|   6.94e-42   0.0000115   36-268   1k07 A:  
 
Weak hits:
gi|375144189|ref|YP_005006630.1|   1.27e-37   0.061   18-218   2gmn A:29-292  
gi|375146457|ref|YP_005008898.1|   4.94e-32   0.015   11-310   1m2x A:  

Chitinophaga pinensis DSM 2588 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|256423562|ref|YP_003124215.1|   4.72e-38   0.0000154   39-274   1k07 A:  
 
Weak hits:
gi|256421704|ref|YP_003122357.1|   3.93e-47   0.035   19-291   1x8h A:  
gi|256423978|ref|YP_003124631.1|   4.42e-36   0.086   4-239   1dd6 A:  

Fibrella aestuarina has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|436838076|ref|YP_007323292.1|   8.52e-40   0.0000083   2-248   2bc2 A:  
 
Weak hits:
gi|436837169|ref|YP_007322385.1|   1.76e-43   0.025   4-221   2gmn A:29-292  

Dyadobacter fermentans DSM 18053 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|255034371|ref|YP_003084992.1|   1.44e-40   0.0000157   36-272   1k07 A:  
gi|255035162|ref|YP_003085783.1|   7.47e-36   0.0000107   34-241   1a7t A:  

Spirosoma linguale DSM 74 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|284038141|ref|YP_003388071.1|   1.27e-40   0.00000796   31-245   2bc2 A:  
 
Weak hits:
gi|284036540|ref|YP_003386470.1|   1.33e-22   0.015   274-449   1m2x A:  
gi|284036591|ref|YP_003386521.1|   1.27e-42   0.016   3-222   2gmn A:29-292  

Runella slithyformis DSM 19594 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|338213795|ref|YP_004657850.1|   1.57e-40   0.000018   23-222   2bc2 A:  
 
Weak hits:
gi|338209502|ref|YP_004646472.1|   0.0000000000000223   0.072   20-293   2gmn A:29-292  
gi|338210236|ref|YP_004654283.1|   3.41e-43   0.018   8-222   1sml A:  

Paludibacter propionicigenes WB4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|313203237|ref|YP_004041894.1|   7.73e-33   0.0000505   40-247   1a7t A:  

Alistipes finegoldii DSM 17242 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|390946537|ref|YP_006410297.1|   8.4e-39   0.000000626   80-292   1a7t A:  
 
Weak hits:
gi|390945846|ref|YP_006409606.1|   6.63e-25   0.07   1-240   1sml A:  

Sphingobacterium sp. 21 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|326800637|ref|YP_004318456.1|   3.93e-37   0.0000146   31-242   1a7t A:  
 
Weak hits:
gi|326798145|ref|YP_004315964.1|   2.1e-24   0.096   39-246   2gmn A:29-292  

Fluviicola taffensis DSM 16823 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|327405594|ref|YP_004346432.1|   2.57e-33   0.00000879   22-232   1m2x A:  

Owenweeksia hongkongensis DSM 17368 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|375013296|ref|YP_004990284.1|   3.28e-31   0.0000134   32-240   1a7t A:  
 
Weak hits:
gi|375012977|ref|YP_004989965.1|   0.0264   0.043   22-104   1dd6 A:  

Krokinobacter sp. 4H-3-7-5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|332293601|ref|YP_004432210.1|   4.32e-32   0.0001   57-248   1a7t A:  
 
Weak hits:
gi|332292136|ref|YP_004430745.1|   1.05e-28   0.067   81-283   1k07 A:  

Maribacter sp. HTCC2170 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|305665005|ref|YP_003861292.1|   6.68e-37   0.0000161   32-242   1a7t A:  
 
Weak hits:
gi|305664680|ref|YP_003860967.1|   7.87e-22   0.029   1-253   2bc2 A:  
gi|305665232|ref|YP_003861519.1|   8.26e-41   0.026   17-250   1x8h A:  

Zobellia galactanivorans has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|340616809|ref|YP_004735262.1|   1.11e-34   0.0000156   32-242   1a7t A:  
 
Weak hits:
gi|340616852|ref|YP_004735305.1|   2.34e-32   0.0086   45-271   1ko3 A:  

Muricauda ruestringensis DSM 13258 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|344202209|ref|YP_004787352.1|   1.24e-37   0.000019   32-240   1a7t A:  
 
Weak hits:
gi|344204017|ref|YP_004789160.1|   1.02e-23   0.032   22-266   1x8h A:  

Ornithobacterium rhinotracheale DSM 15997 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|392389807|ref|YP_006426410.1|   8.91e-36   0.0000566   72-282   1a7t A:  

Flavobacterium johnsoniae UW101 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|146301227|ref|YP_001195818.1|   5.6e-43   0.00000119   23-234   1m2x A:  
 
Weak hits:
gi|146298984|ref|YP_001193575.1|   1.03e-22   0.088   32-319   2gmn A:29-292  
gi|146302698|ref|YP_001197289.1|   5.2e-24   0.081   1-27,59-237   2bc2 A:  

  1 2 3 4 5 6 7 8   Next Last
Showing genomes 1 to 25 of 185

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Zn metallo-beta-lactamase domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   16834 16834
No Yes Phytophthora capsici   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   2 2
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Maribacter sp. HTCC2170   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Muricauda ruestringensis DSM 13258   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   2 2
No Yes Erythrobacter litoralis HTCC2594   1 1
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   2 2
No Yes Teredinibacter turnerae T7901   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   2 2
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella frigidimarina NCIMB 400   1 1
No Yes Rhodanobacter denitrificans   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Caulobacter crescentus CB15   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Combined (meta-genome)   4 4
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   11496 11496
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   79 79
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   3433 3433
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   11 11
No Yes NCBI plasmid sequences (Plasmids)   54 54
No Yes PDB chains (SCOP 1.75) (PDB)   21 21
No Yes Protein Data Bank (all PDB sequenc)   294 294
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1082 1082
No Yes TargetDB (Targets)   2 2
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]