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  Home > Genomes > Ribosome inactivating proteins (RIP) domains in all eukaryotic genomes


Ribosome inactivating proteins (RIP) superfamily domain assignments
in
all eukaryotic genomes

Network of domain occurrence in all genomes

Assignment details

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25 selected genomes have 392 significant domains in 381 proteins.

Showing genomes 1 to 25 of 36
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Aedes aegypti 55 (Not maintained) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
AAEL005004-PA   5.37e-35   17-279   Shiga toxin, A-chain  
AAEL008050-PA   3.67e-32   2-270   Plant cytotoxins  
 
Weak hits:
AAEL007866-PA   0.0709   53-99   Plant cytotoxins  
AAEL011353-PA   0.0763   403-484   Shiga toxin, A-chain  

Culex pipiens quinquefasciatus has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
CPIJ009211|conserved   2.1e-25   14-255   Shiga toxin, A-chain  

Sphaerobolus stellatus v1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Sphst1|210802|estExt_Genewise1.C_840010   6.81e-51   8-203   Plant cytotoxins  
jgi|Sphst1|247578|gm1.9468_g   3.14e-27   9-148   Plant cytotoxins  
 
Weak hits:
jgi|Sphst1|255886|gm1.17776_g   0.067   203-252   Plant cytotoxins  
jgi|Sphst1|273675|gm1.35565_g   0.067   203-252   Plant cytotoxins  

Daldinia eschscholzii EC12 v1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|DalEC12_1|21401|gm1.4009_g   2.75e-47   11-260   Plant cytotoxins  

Magnaporthe poae ATCC 64411 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
MAPG_11083T0   2.62e-34   16-204   Plant cytotoxins  

Theobroma cacao B97-61/B2 v1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
Tc07_g003890   3.41e-41   11-260   Plant cytotoxins  
Tc07_g003950   0.00000000000786   7-77   Plant cytotoxins  
Tc07_g005820   1.31e-36   10-244   Plant cytotoxins  
Tc07_g005860   2.36e-34   4-206   Plant cytotoxins  
 
Weak hits:
Tc05_g023160   0.036   259-293   Plant cytotoxins  

Gossypium raimondii v221 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Gorai.013G087400.1|PACid:26791345   0.00000000000000262   23-110   Plant cytotoxins  
Gorai.013G087700.1|PACid:26786722   3.01e-59   35-289   Plant cytotoxins  
Gorai.013G087700.2|PACid:26786723   1.19e-54   2-291   Plant cytotoxins  

Cucumis sativus v122 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Cucsa.001340.1|PACid:16950883   3.14e-50   25-298   Plant cytotoxins  
 
Weak hits:
Cucsa.142890.1|PACid:16963704   0.0409   321-367   Plant cytotoxins  
Cucsa.156240.1|PACid:16964859   0.0691   144-184   Plant cytotoxins  
Cucsa.156240.2|PACid:16964860   0.0532   144-184   Plant cytotoxins  

Malus domestica v196 has 9 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000134012|PACid:22676477   2.88e-56   3-261   Plant cytotoxins  
MDP0000142368|PACid:22651325   1.11e-26   5-180   Plant cytotoxins  
MDP0000158507|PACid:22671353   3.01e-38   26-214   Plant cytotoxins  
MDP0000223290|PACid:22631641   2.62e-53   3-264   Plant cytotoxins  
MDP0000240407|PACid:22661022   9.04e-38   5-209   Plant cytotoxins  
MDP0000284608|PACid:22667140   4.98e-55   6-248   Plant cytotoxins  
MDP0000305971|PACid:22678665   0.000000000208   26-118   Plant cytotoxins  
MDP0000711911|PACid:22657602   6.03e-69   24-307   Plant cytotoxins  
MDP0000918923|PACid:22628321   8.78e-62   4-273   Plant cytotoxins  
 
Weak hits:
MDP0000235617|PACid:22680054   0.0142   60-94   Plant cytotoxins  

Prunus persica v139 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ppa009409m|PACid:17659008   2.88e-55   4-280   Plant cytotoxins  
ppa009637m|PACid:17643856   5.94e-53   3-265   Plant cytotoxins  

Manihot esculenta v147 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
cassava4.1_022815m|PACid:17991750   1.26e-66   1-229   Plant cytotoxins  
cassava4.1_023613m|PACid:17991779   4.45e-68   39-279   Plant cytotoxins  
cassava4.1_029773m|PACid:17991757   7.86e-69   39-278   Plant cytotoxins  
cassava4.1_031745m|PACid:17991775   5.11e-70   42-282   Plant cytotoxins  
 
Weak hits:
cassava4.1_017927m|PACid:17975688   0.0234   38-86   Plant cytotoxins  
cassava4.1_030816m|PACid:17969347   0.000595   183-244   Plant cytotoxins  

Populus trichocarpa v156 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
POPTR_0013s00540.1|PACid:18221108   0.00000000000144   23-101   Plant cytotoxins  
POPTR_0017s00610.1|PACid:18210350   3.14e-47   7-260   Plant cytotoxins  
POPTR_0017s04370.1|PACid:18210110   1.96e-47   6-260   Plant cytotoxins  
 
Weak hits:
POPTR_0013s06530.1|PACid:18221818   0.0564   259-294   Plant cytotoxins  

Triticum urartu 22 has 25 significant domains in 25 proteins.

     

Sequence ID   Evalue   Region   Family  
TRIUR3_05035-P1   0.0000000000000093   323-497   Plant cytotoxins  
  0.00262   48-100   Plant cytotoxins  
TRIUR3_06533-P1   0.00000000712   534-622   Plant cytotoxins  
TRIUR3_09425-P1   1.44e-50   4-248   Plant cytotoxins  
TRIUR3_14205-P1   0.0000000943   92-171   Plant cytotoxins  
TRIUR3_14457-P1   0.000000000000268   119-272   Plant cytotoxins  
TRIUR3_15862-P1   9.04e-37   410-618   Plant cytotoxins  
TRIUR3_17043-P1   0.00000000773   114-299   Plant cytotoxins  
TRIUR3_17468-P1   1.17e-30   10-218   Plant cytotoxins  
TRIUR3_17469-P1   1.57e-18   2-124   Plant cytotoxins  
TRIUR3_20635-P1   3.54e-19   258-451   Shiga toxin, A-chain  
TRIUR3_21566-P1   0.000000327   71-153   Plant cytotoxins  
TRIUR3_21699-P1   3.41e-25   35-273   Plant cytotoxins  
TRIUR3_23394-P1   4.85e-17   148-373   Plant cytotoxins  
TRIUR3_23799-P1   9.95e-33   40-203   Plant cytotoxins  
TRIUR3_23970-P1   6.55e-34   40-272   Plant cytotoxins  
TRIUR3_25817-P1   1.96e-33   71-274   Plant cytotoxins  
TRIUR3_26573-P1   2.49e-19   21-217   Plant cytotoxins  
TRIUR3_28533-P1   5.37e-20   91-284   Shiga toxin, A-chain  
TRIUR3_30110-P1   0.00000839   84-190   Plant cytotoxins  
TRIUR3_30445-P1   2.1e-40   40-273   Plant cytotoxins  
TRIUR3_31902-P1   0.0000445   113-230   Plant cytotoxins  
TRIUR3_32109-P1   0.000000000642   58-192   Shiga toxin, A-chain  
TRIUR3_34565-P1   0.0000047   14-246   Plant cytotoxins  
TRIUR3_34730-P1   2.23e-31   88-293   Shiga toxin, A-chain  
TRIUR3_35370-P1   3.01e-23   110-308   Shiga toxin, A-chain  
 
Weak hits:
TRIUR3_03340-P1   0.00155   182-279   Plant cytotoxins  
TRIUR3_21567-P1   0.00982   49-101   Plant cytotoxins  

Triticum aestivum 22 has 17 significant domains in 17 proteins.

     

Sequence ID   Evalue   Region   Family  
Traes_1AL_A5860C535.1   1.18e-35   164-400   Plant cytotoxins  
Traes_1AL_C7869B91C.1   1.27e-36   10-204   Plant cytotoxins  
Traes_1BS_0B4284C80.1   0.0000000000559   72-290   Plant cytotoxins  
Traes_2BL_3059B87A6.1   3.67e-42   50-239   Plant cytotoxins  
Traes_2BL_C5DAA5F6B.1   1.96e-43   27-222   Plant cytotoxins  
Traes_2DL_11D80D68C.1   0.0000181   30-79   Plant cytotoxins  
Traes_2DL_6F80AE2BF.1   0.00000000000000106   1-82   Plant cytotoxins  
Traes_2DS_9E49458AD.1   0.00000000000114   331-562   Plant cytotoxins  
Traes_4DL_50DA216DF.1   1.7e-45   40-224   Plant cytotoxins  
Traes_5AL_295176DEF.1   0.0000139   2-47   Plant cytotoxins  
Traes_5BL_029570559.1   0.0000000576   2-52   Plant cytotoxins  
Traes_5BL_D6C9D200D1.2   1.03e-34   21-152   Plant cytotoxins  
Traes_5DL_CEBA87E3F.1   5.63e-38   3-198   Plant cytotoxins  
Traes_5DL_DF4EA7BE9.1   1.15e-40   21-182   Plant cytotoxins  
Traes_5DS_2873CCD2F.1   0.000000000000354   107-218   Plant cytotoxins  
Traes_6BS_F87437638.3   2.49e-19   196-453   Plant cytotoxins  
Traes_7AS_7D9AE6E09.1   2.49e-25   35-273   Plant cytotoxins  
 
Weak hits:
Traes_2BL_1541745A0.1   0.0004   119-304   Plant cytotoxins  
Traes_2DL_5FE7AFA2E.1   0.0628   53-109   Plant cytotoxins  
Traes_2DL_8A7982964.1   0.0523   7-97   Plant cytotoxins  

Aegilops tauschii 22 has 27 significant domains in 27 proteins.

     

Sequence ID   Evalue   Region   Family  
EMT01899   9.17e-19   315-541   Plant cytotoxins  
EMT03770   3.54e-16   60-247   Plant cytotoxins  
EMT05877   2.62e-44   13-240   Plant cytotoxins  
EMT06703   1.19e-49   12-270   Plant cytotoxins  
EMT07043   0.00000419   92-150   Plant cytotoxins  
EMT07044   0.0000136   27-116   Plant cytotoxins  
EMT07046   0.00000541   27-89   Plant cytotoxins  
EMT07176   0.000000851   92-156   Plant cytotoxins  
EMT10679   1.96e-22   314-523   Plant cytotoxins  
EMT12510   0.0000000000000072   3-83   Plant cytotoxins  
EMT14225   2.88e-29   17-233   Plant cytotoxins  
EMT14930   0.000000000491   40-202   Plant cytotoxins  
EMT15885   0.00000000000498   25-225   Plant cytotoxins  
EMT16687   6.03e-33   145-359   Plant cytotoxins  
EMT16995   0.00000000511   15-176   Plant cytotoxins  
EMT21509   6.16e-32   81-283   Shiga toxin, A-chain  
EMT22005   2.75e-29   3-177   Shiga toxin, A-chain  
EMT22689   0.00000223   239-310   Shiga toxin, A-chain  
EMT23081   0.00000000000000314   156-400   Plant cytotoxins  
EMT24709   0.00000000000576   143-263   Plant cytotoxins  
EMT24801   2.36e-27   293-460   Shiga toxin, A-chain  
EMT27896   1.21e-37   31-275   Plant cytotoxins  
EMT30051   0.000000000275   374-498   Plant cytotoxins  
EMT30095   4.72e-25   337-513   Plant cytotoxins  
EMT30383   0.0000000382   199-411   Plant cytotoxins  
EMT31679   7.86e-43   32-265   Plant cytotoxins  
EMT33141   1.07e-34   79-306   Plant cytotoxins  
 
Weak hits:
EMT23771   0.000529   83-216   Plant cytotoxins  

Brachypodium distachyon has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
EG:BRADI1G28910.1   1.7e-28   28-181   Plant cytotoxins  
EG:BRADI1G37640.1   0.000000245   92-251   Plant cytotoxins  
EG:BRADI1G63700.1   5.11e-52   8-260   Plant cytotoxins  
EG:BRADI2G27120.1   8.12e-29   13-193   Plant cytotoxins  
EG:BRADI4G05800.1   0.00000000000000127   47-161   Plant cytotoxins  
EG:BRADI5G27420.1   0.000000000076   229-319   Plant cytotoxins  
  0.000943   39-125   Plant cytotoxins  
 
Weak hits:
EG:BRADI5G14040.4   0.00229   152-209   Plant cytotoxins  
EG:BRADI5G14040.5   0.00229   152-209   Plant cytotoxins  
EG:BRADI5G14040.7   0.00278   177-234   Plant cytotoxins  

Oryza barthii 22 has 38 significant domains in 36 proteins.

     

Sequence ID   Evalue   Region   Family  
OBART01G04020.1   3.93e-36   8-147   Plant cytotoxins  
OBART01G04310.1   1.15e-42   8-197   Plant cytotoxins  
  0.0000000000000021   214-312   Plant cytotoxins  
OBART02G03800.1   1.7e-39   42-234   Shiga toxin, A-chain  
OBART02G08010.1   6.29e-39   144-327   Plant cytotoxins  
OBART03G02080.1   0.0000255   258-409   Plant cytotoxins  
OBART03G17810.1   4.32e-47   41-283   Plant cytotoxins  
OBART03G27960.1   2.1e-42   128-387   Plant cytotoxins  
OBART03G29380.1   0.000000000000524   3-111   Plant cytotoxins  
OBART03G29440.1   1.02e-47   2-219   Plant cytotoxins  
OBART03G29770.1   7.91e-35   26-219   Plant cytotoxins  
OBART03G29780.1   7.99e-51   36-274   Shiga toxin, A-chain  
OBART03G29800.1   1.16e-17   38-143   Plant cytotoxins  
OBART03G30110.1   9.69e-46   29-230   Plant cytotoxins  
  1.09e-40   235-413   Plant cytotoxins  
OBART03G30120.1   1.31e-24   73-232   Plant cytotoxins  
OBART03G30160.1   3.93e-36   39-210   Plant cytotoxins  
OBART04G30570.1   2.62e-18   52-258   Plant cytotoxins  
OBART06G14030.1   3.8e-19   18-153   Plant cytotoxins  
OBART07G05710.1   2.1e-37   53-244   Plant cytotoxins  
OBART07G18370.1   1.83e-52   36-270   Plant cytotoxins  
OBART08G02020.1   0.00000763   88-264   Shiga toxin, A-chain  
OBART08G02100.1   0.00000000000000563   71-217   Shiga toxin, A-chain  
OBART08G02130.1   9.82e-35   49-279   Shiga toxin, A-chain  
OBART08G02570.1   0.0000000642   160-307   Shiga toxin, A-chain  
  0.00696   43-116   Plant cytotoxins  
OBART09G00980.1   1.31e-29   13-225   Plant cytotoxins  
OBART10G08320.1   4.45e-44   104-325   Plant cytotoxins  
OBART10G19170.1   8.78e-53   39-270   Shiga toxin, A-chain  
OBART11G00200.1   7.6e-25   67-237   Plant cytotoxins  
OBART11G04170.1   9.69e-51   4-251   Plant cytotoxins  
OBART11G17110.1   0.000000000109   50-157   Plant cytotoxins  
OBART11G17110.2   0.000000000196   102-209   Plant cytotoxins  
OBART11G17110.3   0.0000000000838   39-146   Plant cytotoxins  
OBART11G17110.4   0.000000000196   102-209   Plant cytotoxins  
OBART11G17110.5   0.00000000017   91-198   Plant cytotoxins  
OBART11G18870.1   0.0000000382   662-865   Plant cytotoxins  
OBART12G14570.1   0.0000000109   1-92   Plant cytotoxins  
OBART12G14590.1   1.14e-43   28-273   Plant cytotoxins  
 
Weak hits:
OBART04G25270.1   0.000314   100-130   Plant cytotoxins  
OBART12G06090.1   0.0045   71-238   Plant cytotoxins  

Oryza meridionalis 22 has 31 significant domains in 30 proteins.

     

Sequence ID   Evalue   Region   Family  
OMERI01G04220.1   3.67e-57   8-263   Plant cytotoxins  
OMERI02G04640.1   1.03e-45   2-180   Shiga toxin, A-chain  
OMERI02G22800.1   3.61e-34   35-118,166-336   Plant cytotoxins  
OMERI03G24980.1   6.94e-49   67-292   Plant cytotoxins  
OMERI03G25570.1   2.49e-48   31-232   Plant cytotoxins  
OMERI03G25580.1   1.83e-41   131-326   Plant cytotoxins  
  0.0000000052   8-68   Plant cytotoxins  
OMERI03G25590.1   0.00000000000000275   2-102   Plant cytotoxins  
OMERI03G25600.1   0.00000205   19-89   Shiga toxin, A-chain  
OMERI03G25610.1   3.93e-28   123-308   Plant cytotoxins  
OMERI04G21830.1   0.0000249   55-111   Shiga toxin, A-chain  
OMERI04G25580.1   0.0000000000000616   58-239   Plant cytotoxins  
OMERI05G21770.2   0.00000805   113-221   Plant cytotoxins  
OMERI07G03630.1   8.64e-42   7-227   Plant cytotoxins  
OMERI07G03800.1   4.85e-42   72-309   Plant cytotoxins  
OMERI07G11340.1   6.68e-20   69-224   Shiga toxin, A-chain  
OMERI07G15500.1   1.09e-29   37-173   Plant cytotoxins  
OMERI07G21110.1   0.000000000107   255-428   Plant cytotoxins  
OMERI07G21110.2   0.000000000119   377-549   Plant cytotoxins  
OMERI07G21110.3   0.000000000113   377-550   Plant cytotoxins  
OMERI07G21110.4   0.0000000000864   377-550   Plant cytotoxins  
OMERI08G02190.1   3.93e-18   68-270   Plant cytotoxins  
OMERI08G02260.1   2.23e-22   83-247   Shiga toxin, A-chain  
OMERI08G17920.1   0.000000000000021   68-267   Plant cytotoxins  
OMERI09G01520.1   0.000000000255   171-340   Plant cytotoxins  
OMERI10G05370.1   1.19e-44   78-299   Plant cytotoxins  
OMERI11G00260.1   2.75e-30   67-239   Plant cytotoxins  
OMERI11G00460.1   1.18e-19   72-214   Plant cytotoxins  
OMERI11G15540.1   0.00000000144   77-281   Plant cytotoxins  
OMERI12G02650.1   1.7e-29   11-177   Plant cytotoxins  
OMERI12G10210.1   4.19e-38   3-227   Plant cytotoxins  
 
Weak hits:
OMERI01G18640.1   0.0458   84-222   Plant cytotoxins  
OMERI10G10460.1   0.00376   25-120   Plant cytotoxins  

Oryza glumaepatula 22 has 34 significant domains in 32 proteins.

     

Sequence ID   Evalue   Region   Family  
OGLUM01G04710.1   1.18e-56   8-263   Plant cytotoxins  
OGLUM02G24510.1   2.68e-33   126-209,292-447   Plant cytotoxins  
OGLUM02G24510.2   2.53e-33   111-194,277-432   Plant cytotoxins  
OGLUM02G24520.1   1.93e-22   35-118,166-281   Plant cytotoxins  
OGLUM03G02070.2   0.000047   267-420   Plant cytotoxins  
OGLUM03G18360.1   1.22e-44   41-281   Plant cytotoxins  
OGLUM03G28590.1   1.31e-43   128-387   Plant cytotoxins  
OGLUM03G29610.1   1.44e-34   3-165   Shiga toxin, A-chain  
OGLUM03G30040.1   7.73e-42   26-236   Plant cytotoxins  
OGLUM03G30060.1   8.38e-51   36-276   Shiga toxin, A-chain  
OGLUM03G30080.1   3.41e-43   27-228   Plant cytotoxins  
OGLUM03G30320.1   6.03e-48   32-231   Plant cytotoxins  
OGLUM03G30330.1   4.32e-46   107-308   Plant cytotoxins  
  0.00000000655   11-69   Plant cytotoxins  
OGLUM03G30340.1   5.37e-37   361-543   Plant cytotoxins  
  3.54e-22   117-286   Plant cytotoxins  
OGLUM03G30370.1   0.00000000000000943   2-89   Plant cytotoxins  
OGLUM07G05280.1   1.57e-44   40-278   Plant cytotoxins  
OGLUM07G18160.1   1.83e-54   37-285   Plant cytotoxins  
OGLUM08G02140.1   1.07e-33   22-285   Shiga toxin, A-chain  
OGLUM08G24710.1   0.0000000275   71-146   Plant cytotoxins  
OGLUM08G24720.1   0.0000165   30-112   Plant cytotoxins  
OGLUM09G01460.1   7.2e-17   2-126   Plant cytotoxins  
OGLUM09G01470.1   1.31e-41   70-323   Plant cytotoxins  
OGLUM10G08070.1   0.0000000000000288   93-180   Plant cytotoxins  
OGLUM10G19260.1   5.24e-25   41-150   Plant cytotoxins  
OGLUM10G19260.2   1.24e-17   1-100   Plant cytotoxins  
OGLUM11G03880.1   6.42e-45   22-264   Plant cytotoxins  
OGLUM11G03910.1   1.18e-37   3-226   Plant cytotoxins  
OGLUM11G05810.1   0.0000846   55-98   Plant cytotoxins  
OGLUM12G00090.1   1.57e-20   12-198   Plant cytotoxins  
OGLUM12G15890.1   4.85e-38   4-232   Plant cytotoxins  
OGLUM12G15890.2   1.44e-41   4-243   Plant cytotoxins  
OGLUM12G16060.1   2.23e-18   5-184   Plant cytotoxins  
 
Weak hits:
OGLUM03G02070.1   0.000345   266-399   Plant cytotoxins  
OGLUM04G26820.1   0.00183   100-131   Plant cytotoxins  

Oryza glaberrima has 21 significant domains in 21 proteins.

     

Sequence ID   Evalue   Region   Family  
ORGLA01G0035100.1   3.14e-51   8-268   Plant cytotoxins  
ORGLA01G0374600.1   0.0000000000956   75-161   Shiga toxin, A-chain  
ORGLA01G0400400.1   0.000000000327   9-76   Plant cytotoxins  
ORGLA01G0400500.1   7.99e-51   36-274   Shiga toxin, A-chain  
ORGLA01G0400700.1   2.23e-43   27-228   Plant cytotoxins  
ORGLA02G0035400.1   6.16e-49   12-216   Shiga toxin, A-chain  
ORGLA03G0258000.1   1.57e-42   93-352   Plant cytotoxins  
ORGLA03G0275000.1   7.99e-51   36-274   Shiga toxin, A-chain  
ORGLA03G0275200.1   2.23e-43   27-228   Plant cytotoxins  
ORGLA03G0285200.1   1.3e-24   32-134   Plant cytotoxins  
ORGLA03G0285300.1   1.7e-46   29-230   Plant cytotoxins  
ORGLA03G0285400.1   4.91e-22   1-142   Plant cytotoxins  
ORGLA03G0285500.1   0.00000000327   22-100   Plant cytotoxins  
ORGLA03G0285600.1   5.76e-24   117-281   Plant cytotoxins  
ORGLA03G0285900.1   3.41e-36   43-214   Plant cytotoxins  
ORGLA08G0015300.1   9.56e-35   9-238   Shiga toxin, A-chain  
ORGLA09G0008400.1   8.25e-18   10-129   Plant cytotoxins  
ORGLA10G0070000.1   7.34e-42   128-347   Plant cytotoxins  
ORGLA10G0143400.1   2.23e-52   40-274   Shiga toxin, A-chain  
ORGLA11G0003000.1   6.94e-30   64-241   Plant cytotoxins  
ORGLA11G0039100.1   1.31e-50   4-251   Plant cytotoxins  
 
Weak hits:
ORGLA08G0067000.1   0.0158   12-68   Plant cytotoxins  

Oryza punctata 22 has 33 significant domains in 30 proteins.

     

Sequence ID   Evalue   Region   Family  
OPUNC01G03660.1   8.25e-50   64-316   Plant cytotoxins  
OPUNC01G04110.1   1.07e-55   9-247   Plant cytotoxins  
OPUNC01G21430.1   0.00000559   62-176   Plant cytotoxins  
OPUNC02G03000.1   5.5e-45   39-287   Shiga toxin, A-chain  
OPUNC02G16920.1   0.000000000000177   71-182   Plant cytotoxins  
  0.000441   9-45   Plant cytotoxins  
OPUNC02G22070.1   3.36e-32   35-118,166-336   Plant cytotoxins  
OPUNC03G25440.1   0.00000952   127-213   Plant cytotoxins  
OPUNC03G25440.2   0.00000714   99-185   Plant cytotoxins  
OPUNC03G26900.1   6.42e-29   39-192   Plant cytotoxins  
OPUNC03G26950.1   1.27e-46   36-252   Plant cytotoxins  
OPUNC03G26950.2   1.31e-46   36-252   Plant cytotoxins  
OPUNC03G27120.1   5.5e-43   238-443   Plant cytotoxins  
  2.75e-41   34-238   Shiga toxin, A-chain  
OPUNC03G27130.1   1.17e-43   25-228   Plant cytotoxins  
OPUNC03G27400.1   1.3e-39   18-227   Plant cytotoxins  
  5.89e-28   407-528   Plant cytotoxins  
  1.31e-21   251-404   Plant cytotoxins  
OPUNC03G27410.1   1.83e-41   19-217   Plant cytotoxins  
OPUNC03G27410.2   9.04e-40   97-292   Plant cytotoxins  
OPUNC03G27440.1   3.67e-35   34-198   Plant cytotoxins  
OPUNC03G35410.1   0.00000106   92-166   Plant cytotoxins  
OPUNC04G28100.1   3.01e-18   34-243   Plant cytotoxins  
OPUNC07G05160.1   0.000000288   10-63   Shiga toxin, A-chain  
OPUNC07G07590.1   2.62e-48   14-253   Plant cytotoxins  
OPUNC07G13500.1   0.000000000105   50-144   Plant cytotoxins  
OPUNC07G15260.1   0.0000000437   2-50   Plant cytotoxins  
OPUNC07G17300.1   5.89e-51   36-286   Plant cytotoxins  
OPUNC08G01960.1   0.0000515   81-277   Plant cytotoxins  
OPUNC08G01990.1   8.78e-19   21-167   Plant cytotoxins  
OPUNC08G17410.1   0.000000000867   70-239   Plant cytotoxins  
OPUNC10G17570.1   8.64e-34   10-163   Shiga toxin, A-chain  
OPUNC11G03810.1   2.49e-52   33-270   Plant cytotoxins  
OPUNC12G00290.1   5.76e-17   36-167   Plant cytotoxins  
 
Weak hits:
OPUNC02G00380.4   0.0342   177-234   Plant cytotoxins  
OPUNC05G18540.1   0.0597   121-199   Plant cytotoxins  
OPUNC09G10000.2   0.00687   210-330   Plant cytotoxins  
OPUNC12G05840.1   0.000252   108-290   Shiga toxin, A-chain  

Oryza nivara 22 has 36 significant domains in 33 proteins.

     

Sequence ID   Evalue   Region   Family  
ONIVA01G04780.1   3.67e-57   8-263   Plant cytotoxins  
ONIVA01G24170.1   2.1e-37   3-227   Plant cytotoxins  
ONIVA01G41610.1   0.00000000000000288   31-215   Shiga toxin, A-chain  
ONIVA02G04950.1   7.07e-19   68-174   Plant cytotoxins  
ONIVA03G27920.1   7.99e-30   38-183   Plant cytotoxins  
ONIVA03G28920.1   2.36e-43   141-400   Plant cytotoxins  
ONIVA03G30610.1   5.24e-24   37-176   Plant cytotoxins  
ONIVA03G30740.1   1.96e-50   84-312   Plant cytotoxins  
ONIVA03G31070.1   2.36e-44   27-235   Plant cytotoxins  
ONIVA03G31080.1   2.23e-43   27-228   Plant cytotoxins  
ONIVA03G31340.1   5.76e-48   31-230   Plant cytotoxins  
ONIVA03G31360.1   1.7e-46   29-230   Plant cytotoxins  
ONIVA03G31370.2   1.44e-24   71-232   Plant cytotoxins  
ONIVA03G31380.1   2.75e-41   335-542   Plant cytotoxins  
  9.69e-24   119-281   Plant cytotoxins  
ONIVA03G31410.1   7.6e-26   70-205   Plant cytotoxins  
ONIVA07G04590.1   1.96e-19   59-150   Plant cytotoxins  
ONIVA07G13170.1   0.0000000127   49-144   Plant cytotoxins  
ONIVA08G01920.1   2.62e-18   36-238   Plant cytotoxins  
ONIVA08G01930.1   3.8e-32   21-243   Shiga toxin, A-chain  
ONIVA08G04800.1   3.41e-30   10-225   Plant cytotoxins  
ONIVA08G07480.1   0.0000000396   550-753   Plant cytotoxins  
ONIVA08G11090.1   0.0000000000000314   75-220   Shiga toxin, A-chain  
ONIVA08G13130.1   1.57e-45   37-297   Plant cytotoxins  
  4.06e-30   662-896   Plant cytotoxins  
ONIVA08G13130.2   1.57e-45   37-297   Plant cytotoxins  
  4.06e-30   662-896   Plant cytotoxins  
ONIVA08G23090.1   0.00000000000000223   40-172   Shiga toxin, A-chain  
ONIVA10G07940.1   1.83e-43   73-294   Plant cytotoxins  
ONIVA10G21720.1   1.44e-52   38-269   Shiga toxin, A-chain  
ONIVA11G04190.1   5.5e-51   3-249   Plant cytotoxins  
ONIVA11G09720.1   0.0000727   106-171   Plant cytotoxins  
ONIVA11G09720.2   0.0000000506   93-179   Plant cytotoxins  
ONIVA11G17120.1   0.000000021   46-124   Plant cytotoxins  
ONIVA12G00080.1   8.78e-25   114-270   Plant cytotoxins  
ONIVA12G15750.1   6.03e-20   287-440   Plant cytotoxins  
 
Weak hits:
ONIVA01G24200.1   0.0114   66-279   Plant cytotoxins  
ONIVA06G12000.1   0.0265   195-229   Plant cytotoxins  
ONIVA08G09440.1   0.000126   99-139   Plant cytotoxins  
ONIVA12G05830.1   0.00436   71-235   Plant cytotoxins  
ONIVA12G05830.2   0.00363   71-235   Plant cytotoxins  

Oryza brachyantha 22 has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
OB01G13820.1   1.44e-44   8-273   Plant cytotoxins  
OB01G14050.1   0.00000000000000851   534-626   Plant cytotoxins  
  0.017   7-34   Plant cytotoxins  
OB01G40360.1   1.57e-18   11-112   Plant cytotoxins  
OB02G13250.1   0.0000000000445   30-194   Shiga toxin, A-chain  
OB02G22690.1   3.01e-21   72-247   Plant cytotoxins  
OB03G36980.1   0.0000409   39-113   Plant cytotoxins  
OB03G37230.1   2.75e-37   31-221   Plant cytotoxins  
OB05G22370.1   0.0000000183   6-92   Plant cytotoxins  
OB05G32740.1   0.00000311   34-148   Plant cytotoxins  
OB08G12310.1   0.0000027   21-155   Plant cytotoxins  
OB08G12320.1   0.000000000406   8-88   Plant cytotoxins  
OB09G12940.1   2.1e-35   49-291   Plant cytotoxins  
OB12G26870.1   7.6e-17   95-245   Shiga toxin, A-chain  
 
Weak hits:
OB08G12270.1   0.00894   36-74   Shiga toxin, A-chain  

Oryza sativa ssp. japonica 5.0 has 39 significant domains in 39 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os01g06740.1|13101.m00671|protein   6.16e-53   8-265   Plant cytotoxins  
LOC_Os01g07300.2|13101.m00730|protein   3.01e-56   8-263   Plant cytotoxins  
LOC_Os02g05590.1|13102.m00611|protein   3.14e-50   12-217   Shiga toxin, A-chain  
LOC_Os02g11100.1|13102.m01250|protein   1.7e-20   2-111   Plant cytotoxins  
LOC_Os02g40340.1|13102.m04492|protein   2.04e-37   29-124,207-358   Plant cytotoxins  
LOC_Os02g40340.2|13102.m04493|protein   2.04e-37   29-124,207-358   Plant cytotoxins  
LOC_Os02g40400.1|13102.m04500|protein   1.9e-33   17-118,166-336   Plant cytotoxins  
LOC_Os03g43080.1|13103.m04633|protein   1.31e-27   38-179   Plant cytotoxins  
LOC_Os03g45120.1|13103.m04861|protein   5.11e-45   93-352   Plant cytotoxins  
LOC_Os03g47310.1|13103.m05092|protein   2.36e-22   37-179   Plant cytotoxins  
LOC_Os03g47460.1|13103.m05104|protein   3.67e-53   103-357   Plant cytotoxins  
LOC_Os03g47890.1|13103.m05164|protein   2.62e-43   27-235   Plant cytotoxins  
LOC_Os03g47896.1|13103.m05165|protein   6.03e-51   36-275   Shiga toxin, A-chain  
LOC_Os03g47910.1|13103.m05167|protein   2.23e-43   27-228   Plant cytotoxins  
LOC_Os03g48200.1|13103.m05201|protein   1.7e-47   32-231   Plant cytotoxins  
LOC_Os03g48220.1|13103.m05202|protein   1.7e-46   29-230   Plant cytotoxins  
LOC_Os03g48225.1|13103.m12828|protein   4.91e-22   1-142   Plant cytotoxins  
LOC_Os03g48235.1|13103.m12829|protein   1.57e-30   19-171   Plant cytotoxins  
LOC_Os03g48250.1|13103.m05204|protein   5.63e-25   119-283   Plant cytotoxins  
LOC_Os03g48280.1|13103.m05207|protein   6.69e-27   70-205   Plant cytotoxins  
LOC_Os07g09070.1|13107.m00913|protein   1.21e-34   17-205   Plant cytotoxins  
LOC_Os07g37090.1|13107.m03812|protein   1.57e-54   37-285   Plant cytotoxins  
LOC_Os08g03760.1|13108.m00342|protein   0.00000000000000419   76-268   Shiga toxin, A-chain  
LOC_Os08g03820.1|13108.m00348|protein   3.93e-18   68-270   Plant cytotoxins  
LOC_Os08g03900.1|13108.m00358|protein   0.00000000000000537   71-217   Shiga toxin, A-chain  
LOC_Os08g04030.1|13108.m00371|protein   2.1e-34   9-238   Shiga toxin, A-chain  
LOC_Os09g03280.1|13109.m00250|protein   8.25e-18   10-129   Plant cytotoxins  
LOC_Os10g24050.1|13110.m02007|protein   4.45e-44   142-363   Plant cytotoxins  
LOC_Os10g42060.1|13110.m03944|protein   1.7e-52   39-270   Shiga toxin, A-chain  
LOC_Os11g01290.1|13111.m00037|protein   8.64e-30   65-242   Plant cytotoxins  
LOC_Os11g06460.1|13111.m00653|protein   2.23e-54   13-252   Plant cytotoxins  
LOC_Os11g06490.1|13111.m00656|protein   2.49e-57   10-302   Plant cytotoxins  
LOC_Os11g06630.1|13111.m00670|protein   1.1e-51   3-249   Plant cytotoxins  
LOC_Os11g35425.1|13111.m03452|protein   0.0000000747   2-71   Plant cytotoxins  
LOC_Os11g38340.1|13111.m03765|protein   0.0000000223   108-311   Plant cytotoxins  
LOC_Os12g01290.1|13112.m00038|protein   0.000000000000144   275-384   Shiga toxin, A-chain  
LOC_Os12g07520.1|13112.m00787|protein   5.37e-48   31-289   Plant cytotoxins  
LOC_Os12g34950.1|13112.m03569|protein   4.45e-26   1358-1542   Plant cytotoxins  
LOC_Os12g35010.1|13112.m03578|protein   2.75e-42   153-398   Plant cytotoxins  
 
Weak hits:
LOC_Os01g40820.1|13101.m04182|protein   0.0106   66-279   Plant cytotoxins  
LOC_Os04g54730.1|13104.m05664|protein   0.000124   98-138   Plant cytotoxins  
LOC_Os12g10830.1|13112.m01152|protein   0.00403   71-238   Plant cytotoxins  

Oryza sativa v193 has 39 significant domains in 39 proteins.

     

Sequence ID   Evalue   Region   Family  
LOC_Os01g06740.1|PACid:21903750   6.16e-53   8-265   Plant cytotoxins  
LOC_Os01g07300.2|PACid:21910352   3.01e-56   8-263   Plant cytotoxins  
LOC_Os02g05590.1|PACid:21918588   3.14e-50   12-217   Shiga toxin, A-chain  
LOC_Os02g11100.1|PACid:21921249   1.7e-20   2-111   Plant cytotoxins  
LOC_Os02g40340.1|PACid:21919491   2.04e-37   29-124,207-358   Plant cytotoxins  
LOC_Os02g40340.2|PACid:21919492   2.04e-37   29-124,207-358   Plant cytotoxins  
LOC_Os02g40400.1|PACid:21919381   1.9e-33   17-118,166-336   Plant cytotoxins  
LOC_Os03g43080.1|PACid:21913747   1.31e-27   38-179   Plant cytotoxins  
LOC_Os03g45120.1|PACid:21913333   5.11e-45   93-352   Plant cytotoxins  
LOC_Os03g47310.1|PACid:21914067   2.36e-22   37-179   Plant cytotoxins  
LOC_Os03g47460.1|PACid:21917716   3.67e-53   103-357   Plant cytotoxins  
LOC_Os03g47890.1|PACid:21917611   2.62e-43   27-235   Plant cytotoxins  
LOC_Os03g47896.1|PACid:21912933   6.03e-51   36-275   Shiga toxin, A-chain  
LOC_Os03g47910.1|PACid:21912353   2.23e-43   27-228   Plant cytotoxins  
LOC_Os03g48200.1|PACid:21917298   1.7e-47   32-231   Plant cytotoxins  
LOC_Os03g48220.1|PACid:21912588   1.7e-46   29-230   Plant cytotoxins  
LOC_Os03g48225.1|PACid:21917728   4.91e-22   1-142   Plant cytotoxins  
LOC_Os03g48235.1|PACid:21911239   1.57e-30   19-171   Plant cytotoxins  
LOC_Os03g48250.1|PACid:21915322   5.63e-25   119-283   Plant cytotoxins  
LOC_Os03g48280.1|PACid:21916025   6.69e-27   70-205   Plant cytotoxins  
LOC_Os07g09070.1|PACid:21898386   1.14e-34   14-202   Plant cytotoxins  
LOC_Os07g37090.1|PACid:21898549   1.57e-54   37-285   Plant cytotoxins  
LOC_Os08g03760.1|PACid:21887942   0.00000000000000419   76-268   Shiga toxin, A-chain  
LOC_Os08g03820.1|PACid:21891147   3.93e-18   68-270   Plant cytotoxins  
LOC_Os08g03900.1|PACid:21888017   0.00000000000000537   71-217   Shiga toxin, A-chain  
LOC_Os08g04030.1|PACid:21888606   2.1e-34   9-238   Shiga toxin, A-chain  
LOC_Os09g03280.1|PACid:21926945   8.25e-18   10-129   Plant cytotoxins  
LOC_Os10g24050.1|PACid:21885965   4.45e-44   142-363   Plant cytotoxins  
LOC_Os10g42060.1|PACid:21885771   1.7e-52   39-270   Shiga toxin, A-chain  
LOC_Os11g01290.1|PACid:21944386   8.64e-30   65-242   Plant cytotoxins  
LOC_Os11g06460.1|PACid:21948759   2.23e-54   13-252   Plant cytotoxins  
LOC_Os11g06490.1|PACid:21948391   2.49e-57   10-302   Plant cytotoxins  
LOC_Os11g06630.1|PACid:21945081   1.1e-51   3-249   Plant cytotoxins  
LOC_Os11g35425.1|PACid:21946051   0.0000000747   2-71   Plant cytotoxins  
LOC_Os11g38340.1|PACid:21947932   0.0000000109   78-281   Plant cytotoxins  
LOC_Os12g01290.1|PACid:21934332   0.000000000000144   275-384   Shiga toxin, A-chain  
LOC_Os12g07520.1|PACid:21937336   5.37e-48   31-289   Plant cytotoxins  
LOC_Os12g34950.1|PACid:21934963   4.45e-26   1358-1542   Plant cytotoxins  
LOC_Os12g35010.1|PACid:21938594   2.75e-42   153-398   Plant cytotoxins  
 
Weak hits:
LOC_Os01g40820.1|PACid:21904380   0.0106   66-279   Plant cytotoxins  
LOC_Os04g54730.1|PACid:21894665   0.000101   79-119   Plant cytotoxins  
LOC_Os12g10830.1|PACid:21934777   0.00403   71-238   Plant cytotoxins  

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Select to display   Genome       Domains   Proteins
No Yes ALL   7944 7944
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 4 4
No Yes Gossypium raimondii v221   3 3
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Malus domestica v196 Apple 9 9
No Yes Prunus persica v139 Peach 2 2
No Yes Manihot esculenta v147 Cassava 4 4
No Yes Populus trichocarpa v156 Black cottonwood 3 3
No Yes Triticum urartu 22   25 25
No Yes Triticum aestivum 22 Bread wheat 17 17
No Yes Aegilops tauschii 22   27 27
No Yes Brachypodium distachyon Stiff brome 6 6
No Yes Oryza barthii 22 African wild rice 38 36
No Yes Oryza meridionalis 22   31 30
No Yes Oryza glumaepatula 22   34 32
No Yes Oryza glaberrima African rice 21 21
No Yes Oryza punctata 22   33 30
No Yes Oryza nivara 22   36 33
No Yes Oryza brachyantha 22 Malo sina 13 13
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 39 39
No Yes Oryza sativa v193 Rice 39 39
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 4 4
No Yes Panicum virgatum v202 Switchgrass 60 60
No Yes Setaria italica v164 Foxtail millet 15 15
No Yes Zea mays subsp. mays Maize 10 10
No Yes Zea mays v181 Maize 14 14
No Yes Sorghum bicolor Sorghum 10 10
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces scabiei 87.22   2 2
No Yes Melioribacter roseus P3M   1 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 18 18
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 43 42
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Corynebacterium ulcerans 809   1 1
No Yes Corynebacterium diphtheriae BH8   1 1
No Yes Corynebacterium diphtheriae INCA 402   1 1
No Yes Corynebacterium diphtheriae VA01   1 1
No Yes Corynebacterium diphtheriae HC04   1 1
No Yes Corynebacterium diphtheriae HC03   1 1
No Yes Corynebacterium diphtheriae HC02   1 1
No Yes Corynebacterium diphtheriae HC01   1 1
No Yes Corynebacterium diphtheriae 241   1 1
No Yes Corynebacterium diphtheriae CDCE 8392   1 1
No Yes Corynebacterium diphtheriae PW8   1 1
No Yes Corynebacterium diphtheriae C7 (beta)   1 1
No Yes Corynebacterium diphtheriae 31A   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli O103:H2 str. 12009   2 2
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Malus x domestica (Duplicate) Apple 9 9
No Yes Ricinus communis (Early assembly) Castor bean 20 20
No Yes Combined (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3398 3393
No Yes STRING v9.0.5 (STRING)   115 114
No Yes Uniprot 2018_03 genome   2164 2112
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   13 13
No Yes PDB chains (SCOP 1.75) (PDB)   45 45
No Yes Protein Data Bank (all PDB sequenc)   301 299
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1030 1030
No Yes UniProt viral sequences (Viral)   51 51

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.