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  Home > Genomes > Nitric oxide (NO) synthase oxygenase domain domains in all genomes


Nitric oxide (NO) synthase oxygenase domain superfamily domain assignments
in
all genomes

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25 selected genomes have 111 significant domains in 106 proteins.

Showing genomes 1 to 25 of 419
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Homo sapiens 76_38 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000297494   4.97e-196   66-480   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000320758   1.13e-202   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000327251   3.01e-208   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000337459   1.18e-202   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000339862   1.13e-202   304-720   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000417143   2.09e-144   1-277   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000420215   1.01e-196   66-480   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000420551   9.42e-197   66-480   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000477999   1.18e-202   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSP00000482291   4.97e-179   82-457   Nitric oxide (NO) synthase oxygenase domain  

Pan troglodytes 76_2.1.4 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000015192   3.01e-208   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSPTRP00000015193   1.02e-208   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSPTRP00000034022   5.49e-196   66-480   Nitric oxide (NO) synthase oxygenase domain  
ENSPTRP00000052967   4.97e-179   82-457   Nitric oxide (NO) synthase oxygenase domain  
ENSPTRP00000059562   3.27e-203   284-700   Nitric oxide (NO) synthase oxygenase domain  

Gorilla gorilla 76_3.1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000000808   3.01e-208   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSGGOP00000007331   9.55e-204   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSGGOP00000016427   3.4e-189   9-396   Nitric oxide (NO) synthase oxygenase domain  
ENSGGOP00000018225   3.01e-208   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSGGOP00000026762   9.94e-204   305-721   Nitric oxide (NO) synthase oxygenase domain  

Pongo abelii 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000005706   2.22e-203   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSPPYP00000005707   2.35e-203   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSPPYP00000009087   2.09e-207   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSPPYP00000020384   8.11e-48   7-113   Nitric oxide (NO) synthase oxygenase domain  

Nomascus leucogenys 76_1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000357   1.83e-201   306-724   Nitric oxide (NO) synthase oxygenase domain  
ENSNLEP00000002093   7.33e-209   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSNLEP00000004866   5.63e-196   66-480   Nitric oxide (NO) synthase oxygenase domain  

Papio anubis 76 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000006430   2.62e-203   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSPANP00000007292   2.49e-203   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSPANP00000017929   1.3e-195   66-480   Nitric oxide (NO) synthase oxygenase domain  
ENSPANP00000019802   4.32e-200   82-494   Nitric oxide (NO) synthase oxygenase domain  

Macaca mulatta 76_1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000013184   1.11e-175   82-459   Nitric oxide (NO) synthase oxygenase domain  
ENSMMUP00000018435   3.27e-208   82-496   Nitric oxide (NO) synthase oxygenase domain  
ENSMMUP00000018436   2.47e-129   302-613   Nitric oxide (NO) synthase oxygenase domain  
ENSMMUP00000026905   2.22e-180   68-478   Nitric oxide (NO) synthase oxygenase domain  

Callithrix jacchus 76_3.2.1 has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000017309   2.09e-184   304-720   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000017318   8.63e-184   301-716   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000017332   8.63e-184   303-718   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000022843   2.35e-157   1-294   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000022844   3.27e-176   81-496   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000037572   1.01e-195   62-476   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000037581   1.07e-195   62-476   Nitric oxide (NO) synthase oxygenase domain  
ENSCJAP00000046267   6.54e-120   1-262   Nitric oxide (NO) synthase oxygenase domain  

Otolemur garnettii 76_3 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000001572   2.88e-195   71-485   Nitric oxide (NO) synthase oxygenase domain  
ENSOGAP00000007948   4.32e-208   83-498   Nitric oxide (NO) synthase oxygenase domain  
ENSOGAP00000011090   2.22e-203   305-721   Nitric oxide (NO) synthase oxygenase domain  

Microcebus murinus 76_1 has 5 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000004303   1.2e-116   197-425   Nitric oxide (NO) synthase oxygenase domain  
  0.00000000000392   10-85   Nitric oxide (NO) synthase oxygenase domain  
ENSMICP00000007526   6.54e-178   84-495   Nitric oxide (NO) synthase oxygenase domain  
ENSMICP00000010039   1.23e-154   432-717   Nitric oxide (NO) synthase oxygenase domain  
  0.000000222   326-377   Nitric oxide (NO) synthase oxygenase domain  

Rattus norvegicus 76_5.0 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000001493   3.53e-203   300-716   Nitric oxide (NO) synthase oxygenase domain  
ENSRNOP00000013058   7.06e-196   67-481   Nitric oxide (NO) synthase oxygenase domain  
ENSRNOP00000016133   1.57e-206   43-457   Nitric oxide (NO) synthase oxygenase domain  
ENSRNOP00000039911   1.11e-131   297-606   Nitric oxide (NO) synthase oxygenase domain  
ENSRNOP00000062735   3.66e-203   300-716   Nitric oxide (NO) synthase oxygenase domain  
ENSRNOP00000065783   1.06e-67   1-154   Nitric oxide (NO) synthase oxygenase domain  
ENSRNOP00000067662   1.57e-206   79-493   Nitric oxide (NO) synthase oxygenase domain  

Mus musculus 76_38 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000018610   5.89e-206   76-490   Nitric oxide (NO) synthase oxygenase domain  
ENSMUSP00000030834   6.93e-197   67-481   Nitric oxide (NO) synthase oxygenase domain  
ENSMUSP00000099617   2.75e-203   300-716   Nitric oxide (NO) synthase oxygenase domain  
ENSMUSP00000110742   5.76e-197   67-481   Nitric oxide (NO) synthase oxygenase domain  
ENSMUSP00000120421   2.75e-203   300-716   Nitric oxide (NO) synthase oxygenase domain  
ENSMUSP00000127432   2.75e-203   300-716   Nitric oxide (NO) synthase oxygenase domain  
ENSMUSP00000138506   2.62e-203   300-716   Nitric oxide (NO) synthase oxygenase domain  

Dipodomys ordii 76_1 has 5 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000000493   8.11e-122   234-488   Nitric oxide (NO) synthase oxygenase domain  
  8.5e-18   74-151   Nitric oxide (NO) synthase oxygenase domain  
ENSDORP00000003896   3.14e-158   69-410   Nitric oxide (NO) synthase oxygenase domain  
ENSDORP00000008621   2.01e-121   188-474   Nitric oxide (NO) synthase oxygenase domain  
  0.00000000000000523   61-142   Nitric oxide (NO) synthase oxygenase domain  

Ictidomys tridecemlineatus 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000000795   6.8e-197   74-488   Nitric oxide (NO) synthase oxygenase domain  
ENSSTOP00000017090   6.02e-145   82-484   Nitric oxide (NO) synthase oxygenase domain  
ENSSTOP00000023013   1.96e-170   2-341   Nitric oxide (NO) synthase oxygenase domain  
ENSSTOP00000023214   2.22e-167   2-343   Nitric oxide (NO) synthase oxygenase domain  

Heterocephalus glaber v1.7-2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000327251   2.75e-203   81-508   Nitric oxide (NO) synthase oxygenase domain  
HGL_H00000337459   4.71e-199   134-552   Nitric oxide (NO) synthase oxygenase domain  
HGL_H00000385819   1.09e-194   71-484   Nitric oxide (NO) synthase oxygenase domain  

Cavia porcellus 76_3 has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000003945   4.19e-195   69-483   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000003946   4.19e-195   59-473   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000008597   9.42e-202   302-718   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000009901   6.28e-24   1-89   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000016760   1.83e-207   81-495   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000017114   1.31e-68   1-134   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000017277   4.84e-205   81-497   Nitric oxide (NO) synthase oxygenase domain  
ENSCPOP00000017885   4.84e-46   1-92   Nitric oxide (NO) synthase oxygenase domain  

Oryctolagus cuniculus 76_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000001643   3.79e-205   81-496   Nitric oxide (NO) synthase oxygenase domain  
ENSOCUP00000020745   2.09e-203   306-722   Nitric oxide (NO) synthase oxygenase domain  
ENSOCUP00000025713   1.28e-196   74-487   Nitric oxide (NO) synthase oxygenase domain  

Ochotona princeps 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000003403   6.67e-196   69-482   Nitric oxide (NO) synthase oxygenase domain  
ENSOPRP00000008340   8.63e-203   258-674   Nitric oxide (NO) synthase oxygenase domain  
ENSOPRP00000011520   3.66e-202   78-489   Nitric oxide (NO) synthase oxygenase domain  

Tupaia belangeri 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000000969   5.89e-176   81-462   Nitric oxide (NO) synthase oxygenase domain  
ENSTBEP00000002429   4.06e-127   300-614   Nitric oxide (NO) synthase oxygenase domain  

Sus scrofa 76_10.2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000010520   5.76e-158   305-725   Nitric oxide (NO) synthase oxygenase domain  
ENSSSCP00000017432   7.06e-197   18-432   Nitric oxide (NO) synthase oxygenase domain  
ENSSSCP00000018812   3.01e-203   2-403   Nitric oxide (NO) synthase oxygenase domain  

Bos taurus 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000009062   1.31e-207   81-496   Nitric oxide (NO) synthase oxygenase domain  
ENSBTAP00000011690   6.02e-204   305-721   Nitric oxide (NO) synthase oxygenase domain  
ENSBTAP00000023515   9.42e-196   68-482   Nitric oxide (NO) synthase oxygenase domain  

Ovis aries 76_3.1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000002091   2.88e-193   68-483   Nitric oxide (NO) synthase oxygenase domain  
ENSOARP00000004517   7.98e-204   300-716   Nitric oxide (NO) synthase oxygenase domain  
ENSOARP00000004518   5.1e-204   35-451   Nitric oxide (NO) synthase oxygenase domain  
ENSOARP00000017986   9.29e-207   81-496   Nitric oxide (NO) synthase oxygenase domain  

Vicugna pacos 76_1 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000002916   3.66e-100   300-544   Nitric oxide (NO) synthase oxygenase domain  
  2.35e-31   645-719   Nitric oxide (NO) synthase oxygenase domain  

Tursiops truncatus 76_1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000000790   1.31e-191   63-475   Nitric oxide (NO) synthase oxygenase domain  
ENSTTRP00000002190   1.06e-196   105-496   Nitric oxide (NO) synthase oxygenase domain  
ENSTTRP00000002293   3.01e-202   304-720   Nitric oxide (NO) synthase oxygenase domain  

Mustela putorius furo 76_1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000002786   1.44e-205   304-721   Nitric oxide (NO) synthase oxygenase domain  
ENSMPUP00000007524   7.98e-197   74-488   Nitric oxide (NO) synthase oxygenase domain  
ENSMPUP00000014256   5.76e-203   2-403   Nitric oxide (NO) synthase oxygenase domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   22946 22946
No Yes Homo sapiens 76_38 Human 10 10
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 5 5
No Yes Gorilla gorilla 76_3.1 Western gorilla 5 5
No Yes Pongo abelii 76_2 Sumatran orangutan 4 4
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 4 4
No Yes Macaca mulatta 76_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 8 8
No Yes Otolemur garnettii 76_3 Small-eared galago 3 3
No Yes Microcebus murinus 76_1 Gray mouse lemur 5 3
No Yes Rattus norvegicus 76_5.0 Norway rat 7 7
No Yes Mus musculus 76_38 House mouse 7 7
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 3
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 4
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 3 3
No Yes Cavia porcellus 76_3 Domestic guinea pig 8 8
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 3 3
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 3 3
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 4 4
No Yes Vicugna pacos 76_1 Alpaca 2 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 76_1.0 Domestic ferret 3 3
No Yes Ailuropoda melanoleuca 76_1 Giant panda 4 4
No Yes Canis familiaris 76_3.1 Dog 7 7
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 5 5
No Yes Myotis lucifugus 76_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 76_1 Large flying fox 4 3
No Yes Sorex araneus 76_1 European shrew 2 1
No Yes Erinaceus europaeus 76 Western European hedgehog 5 3
No Yes Procavia capensis 76_1 Cape rock hyrax 4 3
No Yes Loxodonta africana 76_3 African savanna elephant 7 7
No Yes Echinops telfairi 76 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 4
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 5 3
No Yes Macropus eugenii 76_1.0 Tammar wallaby 4 3
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 76_5 Platypus 5 5
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 76_2 Turkey 3 3
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 3 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 4 4
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 76_4 Torafugu 4 4
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 3 3
No Yes Danio rerio 76_9 Zebrafish 5 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 5 5
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 4 4
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 3
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 6 6
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 9 9
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 3 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   3 3
No Yes Sarcoptes scabiei   2 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   3 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   5 5
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   3 3
No Yes Sphaeroforma arctica JP610   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Glomerella graminicola 22   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Dothistroma septosporum   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   1 1
No Yes Naegleria gruberi   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Anabaena sp. 90   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   2 2
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Exiguobacterium sp. AT1b   1 1
No Yes Exiguobacterium sibiricum 255-15   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Anoxybacillus flavithermus WK1   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   1 1
No Yes Geobacillus kaustophilus HTA426   1 1
No Yes Geobacillus sp. GHH01   1 1
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Bacillus megaterium DSM 319   1 1
No Yes Macrococcus caseolyticus JCSC5402   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Staphylococcus aureus subsp. aureus JH1   1 1
No Yes Staphylococcus aureus   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Natronomonas pharaonis DSM 2160   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 9 9
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 2
No Yes Crinalium epipsammum PCC 9333   2 2
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Saccharothrix espanaensis DSM 44229   2 2
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Geobacillus sp. C56-T3   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   1 1
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Staphylococcus aureus CA-347   1 1
No Yes Staphylococcus aureus Bmb9393   1 1
No Yes Staphylococcus aureus M1   1 1
No Yes Staphylococcus aureus 08BA02176   1 1
No Yes Staphylococcus aureus ST228/18412   1 1
No Yes Staphylococcus aureus ST228/18341   1 1
No Yes Staphylococcus aureus ST228/16125   1 1
No Yes Staphylococcus aureus ST228/16035   1 1
No Yes Staphylococcus aureus ST228/15532   1 1
No Yes Staphylococcus aureus ST228/10497   1 1
No Yes Staphylococcus aureus ST228/10388   1 1
No Yes Staphylococcus aureus 04-02981   1 1
No Yes Staphylococcus aureus RF122   1 1
No Yes Staphylococcus aureus subsp. aureus Z172   1 1
No Yes Staphylococcus aureus subsp. aureus 6850   1 1
No Yes Staphylococcus aureus subsp. aureus SA957   1 1
No Yes Staphylococcus aureus subsp. aureus CN1   1 1
No Yes Staphylococcus aureus subsp. aureus SA40   1 1
No Yes Staphylococcus aureus subsp. aureus 11819-97   1 1
No Yes Staphylococcus aureus subsp. aureus M013   1 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   1 1
No Yes Staphylococcus aureus subsp. aureus VC40   1 1
No Yes Staphylococcus aureus subsp. aureus T0131   1 1
No Yes Staphylococcus aureus subsp. aureus LGA251   1 1
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   1 1
No Yes Staphylococcus aureus subsp. aureus JKD6159   1 1
No Yes Staphylococcus aureus subsp. aureus ED133   1 1
No Yes Staphylococcus aureus subsp. aureus ED98   1 1
No Yes Staphylococcus aureus subsp. aureus TW20   1 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   1 1
No Yes Staphylococcus aureus subsp. aureus TCH60   1 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   1 1
No Yes Staphylococcus aureus subsp. aureus 71193   1 1
No Yes Staphylococcus aureus subsp. aureus S0385   1 1
No Yes Staphylococcus aureus subsp. aureus str. Newman   1 1
No Yes Staphylococcus aureus subsp. aureus Mu3   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   1 1
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   1 1
No Yes Staphylococcus aureus subsp. aureus JH9   1 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   1 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   1 1
No Yes Staphylococcus aureus subsp. aureus MW2   1 1
No Yes Staphylococcus aureus subsp. aureus N315   1 1
No Yes Staphylococcus aureus subsp. aureus Mu50   1 1
No Yes Staphylococcus aureus subsp. aureus COL   1 1
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 7 7
No Yes Homo sapiens (NCBI version) Human 9 9
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3 3
No Yes Homo sapiens 69_37 Human 3 3
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 3 3
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 3
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 3 3
No Yes Microcebus murinus 69_1 Gray mouse lemur 5 3
No Yes Rattus norvegicus 69_3.4 Norway rat 3 3
No Yes Mus musculus 69_38 House mouse 3 3
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 3
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 4
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 69_2 Rabbit 3 3
No Yes Ochotona princeps 69 American pika 3 3
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 2 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 3 3
No Yes Mustela putorius furo 69_1.0 Domestic ferret 3 3
No Yes Ailuropoda melanoleuca 69_1 Giant panda 3 3
No Yes Canis familiaris 69_3.1 Dog 4 4
No Yes Felis catus 69 Domestic cat 3 3
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 69_1 Large flying fox 4 3
No Yes Sorex araneus 69_1 European shrew 2 1
No Yes Erinaceus europaeus 69 Western European hedgehog 5 3
No Yes Procavia capensis 69_1 Cape rock hyrax 4 3
No Yes Loxodonta africana 69_3 African savanna elephant 3 3
No Yes Echinops telfairi 69 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 4 3
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 5 3
No Yes Macropus eugenii 69_1.0 Tammar wallaby 4 3
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 69_5 Platypus 5 5
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 4 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes 3_050719R (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes NCBI 2017_08 genome   13570 13558
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 6
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   181 180
No Yes Uniprot 2018_03 genome   2996 2976
No Yes Global Ocean Sampling Expedition (GOS)   25 25
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   31 31
No Yes Protein Data Bank (all PDB sequenc)   1092 1092
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3844 3544
No Yes TargetDB (Targets)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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