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  Home > Genomes > Aerolisin/ETX pore-forming domain domains in all bacterial genomes


Aerolisin/ETX pore-forming domain superfamily domain assignments
in
all bacterial genomes

Assignment details

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25 selected genomes have 34 significant domains in 34 proteins.

Showing genomes 1 to 25 of 47
  1 2   Next Last

Calothrix sp. PCC 7507 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427717165|ref|YP_007065159.1|   0.00000000392   212-322   ETX/MTX2  

Frankia alni ACN14a has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|111223391|ref|YP_714185.1|   0.000034   290-388   ETX/MTX2  

Kitasatospora setae KM-6054 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|357387114|ref|YP_004901952.1|   0.000000000916   55-139   ETX/MTX2  
 
Weak hits:
gi|357388239|ref|YP_004903078.1|   0.00128   80-139   ETX/MTX2  

Saccharopolyspora erythraea NRRL 2338 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|134103243|ref|YP_001108904.1|   0.00000275   79-135   ETX/MTX2  

Salinispora arenicola CNS-205 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|159037235|ref|YP_001536488.1|   3.53e-24   75-275   ETX/MTX2  
gi|159038114|ref|YP_001537367.1|   2.22e-23   78-275   ETX/MTX2  
gi|159039129|ref|YP_001538382.1|   1.11e-21   78-274   ETX/MTX2  
gi|159039898|ref|YP_001539151.1|   2.09e-24   67-263   ETX/MTX2  
 
Weak hits:
gi|159037158|ref|YP_001536411.1|   0.0706   72-124   ETX/MTX2  

Verrucosispora maris AB-18-032 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|330465573|ref|YP_004403316.1|   8.76e-23   177-324   ETX/MTX2  

Clostridium novyi NT has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118443401|ref|YP_878436.1|   0.0000000418   208-317   ETX/MTX2  

Lysinibacillus sphaericus C3-41 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|169825571|ref|YP_001695746.1|   3.66e-25   104-318   ETX/MTX2  
gi|169826655|ref|YP_001696813.1|   6.41e-56   24-263   ETX/MTX2  
gi|169826697|ref|YP_001696855.1|   2.75e-25   128-340   ETX/MTX2  
gi|169828327|ref|YP_001698485.1|   8.02e-69   39-321   ETX/MTX2  
gi|169828676|ref|YP_001698834.1|   3.66e-25   104-318   ETX/MTX2  
 
Weak hits:
gi|169829415|ref|YP_001699573.1|   0.0301   47-118   (Pro)aerolysin, pore-forming lobe  

Bacillus anthracis str. A0248 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|229599641|ref|YP_002860676.1|   0.0000589   73-179   ETX/MTX2  

Fibrella aestuarina has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|436838322|ref|YP_007323538.1|   6.93e-22   64-259   ETX/MTX2  

Candidatus Solibacter usitatus Ellin6076 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|116623491|ref|YP_825647.1|   0.0000068   341-403   ETX/MTX2  
  0.000327   518-585   ETX/MTX2  

Burkholderia glumae BGR1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|238023307|ref|YP_002907540.1|   0.00000785   86-168   (Pro)aerolysin, pore-forming lobe  
gi|238023492|ref|YP_002907725.1|   0.00000785   86-168   (Pro)aerolysin, pore-forming lobe  
 
Weak hits:
gi|238027193|ref|YP_002911424.1|   0.0314   72-151   (Pro)aerolysin, pore-forming lobe  

Aeromonas veronii B565 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|330831326|ref|YP_004394278.1|   2.49e-131   108-487   (Pro)aerolysin, pore-forming lobe  

Aeromonas salmonicida subsp. salmonicida A449 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|145300766|ref|YP_001143607.1|   9.42e-138   108-490   (Pro)aerolysin, pore-forming lobe  

Aeromonas hydrophila subsp. hydrophila ATCC 7966 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|117618070|ref|YP_854967.1|   9.29e-144   108-491   (Pro)aerolysin, pore-forming lobe  

Vibrio harveyi ATCC BAA-1116 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|156974754|ref|YP_001445661.1|   1.31e-95   108-455   (Pro)aerolysin, pore-forming lobe  
gi|156974756|ref|YP_001445663.1|   4.97e-66   116-442   (Pro)aerolysin, pore-forming lobe  

Photobacterium profundum SS9 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|54303595|ref|YP_133588.1|   3.66e-117   104-481   (Pro)aerolysin, pore-forming lobe  

Shewanella denitrificans OS217 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|91793610|ref|YP_563261.1|   1.96e-116   33-433   (Pro)aerolysin, pore-forming lobe  

Shewanella baltica OS185 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|153000088|ref|YP_001365769.1|   2.88e-109   36-419   (Pro)aerolysin, pore-forming lobe  

Pseudoalteromonas sp. SM9913 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|315126641|ref|YP_004068644.1|   6.67e-83   103-479   (Pro)aerolysin, pore-forming lobe  

Hahella chejuensis KCTC 2396 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|83646295|ref|YP_434730.1|   1.57e-80   40-419   (Pro)aerolysin, pore-forming lobe  

Marinomonas posidonica IVIA-Po-181 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|333908640|ref|YP_004482226.1|   0.0000000000183   193-324   ETX/MTX2  

Pectobacterium wasabiae WPP163 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|261820982|ref|YP_003259088.1|   7.98e-17   44-260   ETX/MTX2  

Pseudomonas entomophila L48 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|104782230|ref|YP_608728.1|   0.000000183   101-166   (Pro)aerolysin, pore-forming lobe  

Francisella cf. novicida 3523 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|387825293|ref|YP_005824764.1|   0.000000000209   312-415   ETX/MTX2  

  1 2   Next Last
Showing genomes 1 to 25 of 47

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Select to display   Genome       Domains   Proteins
No Yes ALL   7456 7456
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 26 26
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 4 4
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 76_1 Coelacanth 5 5
No Yes Lepisosteus oculatus 76 Spotted gar 7 7
No Yes Gadus morhua 76_1 Atlantic cod 6 6
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 76_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 5 5
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 9 9
No Yes Astyanax mexicanus 76 Mexican tetra 6 6
No Yes Danio rerio 76_9 Zebrafish 12 12
No Yes Oikopleura dioica   1 1
No Yes Adineta vaga   9 9
No Yes Octopus bimaculoides 280   4 4
No Yes Crassostrea gigas 22 Pacific oyster 5 5
No Yes Lottia gigantea Owl limpet 3 3
No Yes Helobdella robusta   4 4
No Yes Capitella sp. I   6 6
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1 1
No Yes Strigamia maritima 22   3 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 18 18
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   3 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 4 4
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   3 3
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 6 6
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   2 2
No Yes Echinococcus multilocularis   2 2
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 9 9
No Yes Acropora digitifera v1.0   5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 10 10
No Yes Hydra vulgaris   2 2
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Galerina marginata v1.0   2 2
No Yes Hebeloma cylindrosporum h7 v2.0   2 2
No Yes Laccaria bicolor S238N-H82   4 4
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   12 12
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Fomitiporia mediterranea v1.0   4 4
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Postia placenta   3 3
No Yes Fomitopsis pinicolav1.0   3 3
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   4 4
No Yes Dichomitus squalens   2 2
No Yes Trametes versicolor v1.0   4 4
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Podospora anserina   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Botrytis cinerea B05.10   5 5
No Yes Sclerotinia sclerotiorum   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Selaginella moellendorffii   21 21
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Gossypium raimondii v221   10 10
No Yes Carica papaya Papaya 12 12
No Yes Cucumis sativus v122 Cucumber 8 8
No Yes Fragaria vesca Wild strawberry 10 10
No Yes Malus domestica v196 Apple 4 4
No Yes Linum usitatissimum v200 Flax 5 5
No Yes Vitis vinifera Wine grape 3 3
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   2 2
No Yes Triticum urartu 22   2 2
No Yes Triticum aestivum 22 Bread wheat 7 7
No Yes Aegilops tauschii 22   6 6
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 7 7
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 3 3
No Yes Zea mays v181 Maize 4 4
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Cyanophora paradoxa   3 3
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Salinispora arenicola CNS-205   4 4
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Clostridium novyi NT   1 1
No Yes Lysinibacillus sphaericus C3-41   5 5
No Yes Bacillus anthracis str. A0248   1 1
No Yes Fibrella aestuarina   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Burkholderia glumae BGR1   2 2
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio harveyi ATCC BAA-1116   2 2
No Yes Photobacterium profundum SS9   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Marinomonas posidonica IVIA-Po-181   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 7 7
No Yes Ascaris suum Victoria/Ghent Pig roundworm 3 3
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 3 3
No Yes Hordeum vulgare 22 Domesticated barley 10 10
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Clostridium botulinum BKT015925   4 4
No Yes Enterococcus mundtii QU 25   2 2
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Bacillus thuringiensis HD-789   3 3
No Yes Bacillus thuringiensis MC28   4 4
No Yes Bacillus thuringiensis serovar finitimus YBT-020   3 3
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   2 2
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. A2012   1 1
No Yes Echinicola vietnamensis DSM 17526   2 2
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Loa loa v3.3 (Request) Eye worm 5 5
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 6
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Moniliophthora perniciosa FA553 (Genome survey)   2 2
No Yes Malus x domestica (Duplicate) Apple 4 4
No Yes Ricinus communis (Early assembly) Castor bean 4 4
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 23 23
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 6 6
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 8 8
No Yes Danio rerio 69_9 Zebrafish 10 10
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3215 3207
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   114 114
No Yes Uniprot 2018_03 genome   2849 2840
No Yes Global Ocean Sampling Expedition (GOS)   5 5
No Yes NCBI plasmid sequences (Plasmids)   43 43
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   140 140
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   171 157
No Yes TargetDB (Targets)   3 3
No Yes UniProt viral sequences (Viral)   1 1

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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