SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Anthrax protective antigen family domain assignments
in
all bacterial genomes

Assignment details

(show help)

13 selected genomes have 20 significant domains in 20 proteins.


Bacillus cereus 03BB102 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|225871633|ref|YP_002752991.1|   7.59e-259   4.47e-17   44-764   1acc A:  
gi|225871637|ref|YP_002752995.1|   1.31e-275   3.37e-18   44-764   1acc A:  

Bacillus anthracis str. A0248 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229599856|ref|YP_002860832.1|   2.88e-275   3.06e-18   44-764   1acc A:  

Clostridium difficile BI1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384361821|ref|YP_006199673.1|   6.41e-190   0.0000000121   52-638   1acc A:  

Clostridium difficile R20291 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|260687838|ref|YP_003218972.1|   6.41e-190   0.0000000121   52-638   1acc A:  

Clostridium difficile CD196 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|260684179|ref|YP_003215464.1|   6.41e-190   0.0000000121   52-638   1acc A:  

Clostridium botulinum BKT015925 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|331271124|ref|YP_004385833.1|   9.15e-183   0.0000000192   20-622   1acc A:  

Paenibacillus larvae subsp. larvae DSM 25430 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|568262709|ref|YP_008966184.1|   4.18e-100   0.000000255   13-480   1acc A:  
gi|568263235|ref|YP_008966710.1|   5.62e-71   0.000000749   1-317   1acc A:  
 
Weak hits:
gi|568263234|ref|YP_008966709.1|   0.000017   0.0088   14-48   1acc A:  
gi|568265436|ref|YP_008968911.1|   0.0432   0.031   65-191   1acc A:  
gi|568265595|ref|YP_008969070.1|   0.000942   0.02   52-88   1acc A:  

Bacillus thuringiensis serovar thuringiensis str. IS5056 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|452202417|ref|YP_007482702.1|   1.14e-203   0.0000000532   48-673   1acc A:  
gi|452202436|ref|YP_007482721.1|   1.11e-195   0.0000000506   48-645   1acc A:  

Bacillus cereus biovar anthracis str. CI has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|301068197|ref|YP_003786968.1|   1.31e-275   3.37e-18   44-764   1acc A:  
 
Weak hits:
gi|301068195|ref|YP_003786966.1|   2.48e-40   0.00016   1-153   1acc A:  

Bacillus anthracis str. H9401 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386733713|ref|YP_006204099.1|   2.48e-48   0.0000532   2-174   1acc A:  
gi|386733715|ref|YP_006204101.1|   4.05e-275   3.14e-18   44-764   1acc A:  

Bacillus anthracis str. CDC 684 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|227811583|ref|YP_002811594.1|   2.48e-48   0.0000532   2-174   1acc A:  
gi|227811585|ref|YP_002811596.1|   6.28e-275   3.3e-18   44-764   1acc A:  

Bacillus anthracis str. 'Ames Ancestor' has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|47566475|ref|YP_016494.2|   2.48e-48   0.0000532   2-174   1acc A:  
gi|47566476|ref|YP_016495.2|   2.88e-275   3.06e-18   44-764   1acc A:  

Bacillus anthracis str. A2012 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|21392839|ref|NP_652919.1|   2.48e-48   0.0000532   2-174   1acc A:  
gi|21392840|ref|NP_652920.1|   2.88e-275   3.06e-18   44-764   1acc A:  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Anthrax protective antigen domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   1502 1502
No Yes Bacillus cereus 03BB102   2 2
No Yes Bacillus anthracis str. A0248   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Paenibacillus larvae subsp. larvae DSM 25430   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   2 2
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus anthracis str. H9401   2 2
No Yes Bacillus anthracis str. CDC 684   2 2
No Yes Bacillus anthracis str. 'Ames Ancestor'   2 2
No Yes Bacillus anthracis str. A2012   2 2
No Yes NCBI 2017_08 genome   678 678
No Yes STRING v9.0.5 (STRING)   9 9
No Yes Uniprot 2018_03 genome   251 250
No Yes NCBI plasmid sequences (Plasmids)   23 22
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   64 64
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   453 453

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]