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Scorpion toxin-like superfamily domain assignments
in
Solanum lycopersicum v.2.3

Assignment details

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Solanum lycopersicum v.2.3 has 27 significant domains in 27 proteins.

     

Sequence ID   Evalue   Region   Family  
Solyc04g008470.2.1   0.00000000000000234   27-73   Plant defensins  
Solyc04g009590.2.1   0.00000000000177   28-76   Plant defensins  
Solyc04g072470.2.1   0.0000000000551   33-80   Plant defensins  
Solyc07g005630.2.1   0.00000021   29-78   Plant defensins  
Solyc07g006380.2.1   0.0000000000000762   28-73   Plant defensins  
Solyc07g007710.2.1   0.0000000000000026   30-76   Plant defensins  
Solyc07g007730.2.1   0.00000000000000129   33-79   Plant defensins  
Solyc07g007740.1.1   0.000000206   23-69   Plant defensins  
Solyc07g007750.2.1   0.00000000000000137   30-76   Plant defensins  
Solyc07g007760.2.1   0.00000000000000544   32-78   Plant defensins  
Solyc07g009020.1.1   0.0000177   28-85   Plant defensins  
Solyc07g009030.2.1   0.0000474   28-85   Plant defensins  
Solyc07g009040.2.1   0.0000181   28-85   Plant defensins  
Solyc07g009050.2.1   0.0000152   27-84   Plant defensins  
Solyc07g009060.2.1   0.0000228   28-85   Plant defensins  
Solyc07g009070.2.1   0.0000253   28-85   Plant defensins  
Solyc07g009080.2.1   0.00000461   28-85   Plant defensins  
Solyc07g009090.2.1   0.0000253   28-85   Plant defensins  
Solyc07g009100.2.1   0.0000173   28-85   Plant defensins  
Solyc07g009230.2.1   0.00000136   32-76   Plant defensins  
Solyc07g009260.2.1   0.00000000000133   26-76   Plant defensins  
Solyc07g016120.1.1   0.000000327   28-60   Plant defensins  
Solyc09g074440.2.1   0.00000000613   26-69   Plant defensins  
Solyc11g006260.1.1   0.0000000000000682   30-76   Plant defensins  
Solyc11g006950.1.1   0.00000000000000833   27-73   Plant defensins  
Solyc11g028040.1.1   0.000000000000255   28-73   Plant defensins  
Solyc11g028070.1.1   0.000000000000187   28-73   Plant defensins  
 
Weak hits:
Solyc07g008980.2.1   0.00153   30-85   Plant defensins  
Solyc07g009290.2.1   0.000447   37-77   Plant defensins  
Solyc07g009310.2.1   0.00111   28-79   Plant defensins  
Solyc07g017570.2.1   0.00248   32-81   Short-chain scorpion toxins  
Solyc09g009730.1.1   0.0395   27-63   Short-chain scorpion toxins  
Solyc11g028060.1.1   0.0653   31-53   Plant defensins  

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Select to display   Genome       Domains   Proteins
No Yes ALL   8647 8647
No Yes Adineta vaga   9 9
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 3 1
No Yes Nasonia vitripennis Jewel wasp 5 5
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 3 3
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 2
No Yes Lucilia cuprina Australian sheep blowfly 3 3
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   11 8
No Yes Drosophila yakuba 1.3   8 8
No Yes Drosophila simulans 1.3   7 7
No Yes Drosophila sechellia 1.3   7 7
No Yes Drosophila melanogaster 76_5 Fruit fly 9 9
No Yes Drosophila erecta 1.3   9 9
No Yes Drosophila ananassae 1.3   3 3
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 3 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 3
No Yes Rhodnius prolixus 22   9 9
No Yes Ixodes scapularis (Preliminary) Black-legged tick 9 9
No Yes Meloidogyne hapla   1 1
No Yes Caenorhabditis brenneri   3 3
No Yes Caenorhabditis remanei   4 4
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Pinus taeda Loblolly pine 28 28
No Yes Picea abies Norway spruce 6 6
No Yes Eucalyptus grandis v201 Rose gum 4 4
No Yes Theobroma cacao B97-61/B2 v1 Cacao 9 9
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   8 8
No Yes Citrus sinensis v154 Sweet orange 5 5
No Yes Thellungiella halophila v173   23 23
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 25 25
No Yes Capsella rubella v183   30 30
No Yes Arabidopsis lyrata Lyrate rockcress 31 31
No Yes Arabidopsis thaliana 10 Thale cress 28 28
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 50 47
No Yes Phaseolus vulgaris v186 French bean 12 12
No Yes Glycine max v109 Soybean 10 10
No Yes Cucumis sativus v122 Cucumber 5 5
No Yes Fragaria vesca Wild strawberry 9 9
No Yes Malus domestica v196 Apple 32 30
No Yes Prunus persica v139 Peach 17 17
No Yes Linum usitatissimum v200 Flax 8 8
No Yes Manihot esculenta v147 Cassava 5 5
No Yes Populus trichocarpa v156 Black cottonwood 4 4
No Yes Vitis vinifera Wine grape 3 3
No Yes Mimulus guttatus v140 Spotted monkey flower 14 14
No Yes Solanum lycopersicum v.2.3 Tomato 27 27
No Yes Solanum tuberosum Potato 18 18
No Yes Actinidia chinensis Hongyang   4 4
No Yes Aquilegia coerulea v195   29 29
No Yes Triticum urartu 22   32 32
No Yes Triticum aestivum 22 Bread wheat 51 51
No Yes Aegilops tauschii 22   29 29
No Yes Brachypodium distachyon Stiff brome 12 12
No Yes Oryza barthii 22 African wild rice 13 13
No Yes Oryza meridionalis 22   8 8
No Yes Oryza glumaepatula 22   8 8
No Yes Oryza glaberrima African rice 8 8
No Yes Oryza punctata 22   10 10
No Yes Oryza nivara 22   9 9
No Yes Oryza brachyantha 22 Malo sina 9 9
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 12 12
No Yes Oryza sativa v193 Rice 12 12
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 3 3
No Yes Panicum virgatum v202 Switchgrass 38 38
No Yes Setaria italica v164 Foxtail millet 15 15
No Yes Zea mays subsp. mays Maize 17 17
No Yes Zea mays v181 Maize 21 21
No Yes Sorghum bicolor Sorghum 12 12
No Yes Musa balbisiana Balbis banana 3 3
No Yes Musa acuminata 22 Wild Malaysian banana 5 5
No Yes Amborella trichopoda 22   1 1
No Yes Actinomyces sp. F0330   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 8 8
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 3
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 5 5
No Yes Hordeum vulgare 22 Domesticated barley 21 21
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 8 8
No Yes Heliconius numata (Incomplete)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   2 2
No Yes Malus x domestica (Duplicate) Apple 32 30
No Yes Ricinus communis (Early assembly) Castor bean 3 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   19 18
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 27 27
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 27 27
No Yes Drosophila melanogaster 69_5 Fruit fly 9 9
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 27 27
No Yes NCBI 2017_08 genome   1500 1493
No Yes STRING v9.0.5 (STRING)   181 181
No Yes Uniprot 2018_03 genome   4233 4204
No Yes PDB chains (SCOP 1.75) (PDB)   99 99
No Yes Protein Data Bank (all PDB sequenc)   360 360
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   670 670
No Yes TargetDB (Targets)   5 5

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