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TB module/8-cys domain superfamily domain assignments
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Volvox carteri v199


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Select to display   Genome       Domains   Proteins
No Yes ALL   35705 35705
No Yes Homo sapiens 76_38 Human 152 43
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 43 9
No Yes Gorilla gorilla 76_3.1 Western gorilla 69 14
No Yes Pongo abelii 76_2 Sumatran orangutan 48 10
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 41 8
No Yes Papio anubis 76 Olive baboon 46 10
No Yes Macaca mulatta 76_1 Rhesus monkey 66 17
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 58 18
No Yes Otolemur garnettii 76_3 Small-eared galago 45 9
No Yes Microcebus murinus 76_1 Gray mouse lemur 29 6
No Yes Rattus norvegicus 76_5.0 Norway rat 35 8
No Yes Mus musculus 76_38 House mouse 81 21
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 38 7
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 43 9
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 39 8
No Yes Cavia porcellus 76_3 Domestic guinea pig 34 6
No Yes Oryctolagus cuniculus 76_2 Rabbit 46 8
No Yes Ochotona princeps 76 American pika 36 8
No Yes Tupaia belangeri 76 Northern tree shrew 26 6
No Yes Sus scrofa 76_10.2 Pig 36 11
No Yes Bos taurus 76_3.1 Cattle 57 12
No Yes Ovis aries 76_3.1 Sheep 49 10
No Yes Vicugna pacos 76_1 Alpaca 16 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 42 9
No Yes Mustela putorius furo 76_1.0 Domestic ferret 54 10
No Yes Ailuropoda melanoleuca 76_1 Giant panda 57 11
No Yes Canis familiaris 76_3.1 Dog 54 11
No Yes Felis catus 76_6.2 Domestic cat 42 9
No Yes Equus caballus 76_2 Horse 82 14
No Yes Myotis lucifugus 76_2.0 Little brown bat 30 7
No Yes Pteropus vampyrus 76_1 Large flying fox 41 8
No Yes Sorex araneus 76_1 European shrew 18 4
No Yes Erinaceus europaeus 76 Western European hedgehog 23 4
No Yes Procavia capensis 76_1 Cape rock hyrax 38 8
No Yes Loxodonta africana 76_3 African savanna elephant 56 11
No Yes Echinops telfairi 76 Small Madagascar hedgehog 21 5
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 37 10
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 20 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 28 7
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 32 9
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 43 9
No Yes Ornithorhynchus anatinus 76_5 Platypus 21 6
No Yes Saccoglossus kowalevskii v3.0   25 6
No Yes Petromyzon marinus 76_7.0 Sea lamprey 19 5
No Yes Meleagris gallopavo 76_2 Turkey 29 8
No Yes Gallus gallus 76_4 Chicken 36 6
No Yes Anas platyrhynchos 76_1.0 Mallard 34 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 25 6
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 35 6
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 39 9
No Yes Anolis carolinensis 76_2.0 Green anole 47 10
No Yes Xenopus laevis African clawed frog 19 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 41 8
No Yes Latimeria chalumnae 76_1 Coelacanth 47 12
No Yes Lepisosteus oculatus 76 Spotted gar 61 11
No Yes Gadus morhua 76_1 Atlantic cod 32 8
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 67 14
No Yes Takifugu rubripes 76_4 Torafugu 119 28
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 34 8
No Yes Oryzias latipes 76_1 Japanese medaka 37 9
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 29 8
No Yes Poecilia formosa 76 Amazon molly 37 9
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 44 10
No Yes Astyanax mexicanus 76 Mexican tetra 38 9
No Yes Danio rerio 76_9 Zebrafish 39 15
No Yes Oikopleura dioica   3 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 64 10
No Yes Ciona intestinalis 76 Vase tunicate 10 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 15 4
No Yes Octopus bimaculoides 280   9 3
No Yes Crassostrea gigas 22 Pacific oyster 7 1
No Yes Lottia gigantea Owl limpet 9 1
No Yes Capitella sp. I   7 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 9 1
No Yes Heliconius melpomene Postman butterfly 9 1
No Yes Bombyx mori Domestic silkworm 9 6
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 51 8
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 9 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 7 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 7 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 9 1
No Yes Atta cephalotes v1.1   8 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 1
No Yes Drosophila pseudoobscura 2.13   3 3
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila ananassae 1.3   1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 9 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 9 1
No Yes Acyrthosiphon pisum Pea aphid 9 1
No Yes Rhodnius prolixus 22   9 1
No Yes Daphnia pulex Common water flea 9 1
No Yes Strigamia maritima 22   3 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 3 1
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Acropora digitifera v1.0   5 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 4
No Yes Hydra vulgaris   11 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 34 9
No Yes Homo sapiens 75_37 (old version GRC) Human 154 44
No Yes Homo sapiens (NCBI version) Human 78 18
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 36 8
No Yes Homo sapiens 69_37 Human 45 9
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 43 9
No Yes Gorilla gorilla 69_3.1 Western gorilla 44 9
No Yes Pongo abelii 69_2 Sumatran orangutan 44 9
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 41 8
No Yes Macaca mulatta 69_1 Rhesus monkey 50 10
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 40 10
No Yes Otolemur garnettii 69_3 Small-eared galago 45 9
No Yes Microcebus murinus 69_1 Gray mouse lemur 29 6
No Yes Rattus norvegicus 69_3.4 Norway rat 42 10
No Yes Mus musculus 69_38 House mouse 36 8
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 38 7
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 43 9
No Yes Cavia porcellus 69_3 Domestic guinea pig 34 6
No Yes Oryctolagus cuniculus 69_2 Rabbit 38 7
No Yes Ochotona princeps 69 American pika 36 8
No Yes Tupaia belangeri 69 Northern tree shrew 26 6
No Yes Sus scrofa 69_10.2 Pig 28 8
No Yes Bos taurus 69_3.1 Cattle 45 9
No Yes Vicugna pacos 69_1 Alpaca 16 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 42 9
No Yes Mustela putorius furo 69_1.0 Domestic ferret 45 9
No Yes Ailuropoda melanoleuca 69_1 Giant panda 44 9
No Yes Canis familiaris 69_3.1 Dog 44 8
No Yes Felis catus 69 Domestic cat 30 8
No Yes Equus caballus 69_2 Horse 33 8
No Yes Myotis lucifugus 69_2.0 Little brown bat 30 7
No Yes Pteropus vampyrus 69_1 Large flying fox 41 8
No Yes Sorex araneus 69_1 European shrew 18 4
No Yes Erinaceus europaeus 69 Western European hedgehog 23 4
No Yes Procavia capensis 69_1 Cape rock hyrax 38 8
No Yes Loxodonta africana 69_3 African savanna elephant 43 9
No Yes Echinops telfairi 69 Small Madagascar hedgehog 21 5
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 16 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 20 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 28 7
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 24 7
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 39 8
No Yes Ornithorhynchus anatinus 69_5 Platypus 21 6
No Yes Petromyzon marinus 69_7.0 Sea lamprey 17 4
No Yes Meleagris gallopavo 69_2 Turkey 29 8
No Yes Gallus gallus 69_2 Chicken 36 6
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 25 6
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 35 8
No Yes Anolis carolinensis 69_2.0 Green anole 39 9
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 39 6
No Yes Latimeria chalumnae 69_1 Coelacanth 37 8
No Yes Gadus morhua 69_1 Atlantic cod 32 8
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 33 9
No Yes Takifugu rubripes 69_4 Torafugu 29 7
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 34 8
No Yes Oryzias latipes 69_1 Japanese medaka 36 8
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 29 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 36 8
No Yes Danio rerio 69_9 Zebrafish 28 10
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 8 1
No Yes Ciona intestinalis 69 Vase tunicate 10 2
No Yes NCBI 2017_08 genome   17635 3982
No Yes STRING v9.0.5 (STRING)   940 217
No Yes Uniprot 2018_03 genome   9135 2165
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   15 15
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   40 40
No Yes TargetDB (Targets)   6 3

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