SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Trimerization domain of TRAF superfamily domain assignments
in
all eukaryotic genomes

Assignment details

(show help)

25 selected genomes have 69 significant domains in 69 proteins.

Showing genomes 1 to 25 of 128
  1 2 3 4 5 6   Next Last

Homo sapiens 76_38 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000247668   0.00000000000126   311-349   Trimerization domain of TRAF  
ENSP00000328003   1.44e-20   339-388   Trimerization domain of TRAF  
ENSP00000332468   1.44e-20   339-388   Trimerization domain of TRAF  
ENSP00000376500   1.57e-20   364-413   Trimerization domain of TRAF  
ENSP00000445998   2.54e-20   281-330   Trimerization domain of TRAF  
ENSP00000453032   5.75e-21   192-241   Trimerization domain of TRAF  
ENSP00000454207   1.57e-20   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSP00000362751   0.0602   998-1032   Trimerization domain of TRAF  
ENSP00000362994   0.0863   227-262   Trimerization domain of TRAF  
ENSP00000369080   0.0288   197-232   Trimerization domain of TRAF  
ENSP00000395888   0.0628   12-41   Trimerization domain of TRAF  
ENSP00000438583   0.0523   105-140   Trimerization domain of TRAF  
ENSP00000443183   0.0863   227-262   Trimerization domain of TRAF  

Pan troglodytes 76_2.1.4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000011503   1.57e-20   364-413   Trimerization domain of TRAF  
ENSPTRP00000036949   0.00000000000126   311-349   Trimerization domain of TRAF  
 
Weak hits:
ENSPTRP00000022629   0.0288   197-232   Trimerization domain of TRAF  
ENSPTRP00000036416   0.0863   227-262   Trimerization domain of TRAF  
ENSPTRP00000036468   0.0602   998-1032   Trimerization domain of TRAF  

Gorilla gorilla 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000004192   1.57e-20   364-413   Trimerization domain of TRAF  
ENSGGOP00000006994   0.00000000000126   311-349   Trimerization domain of TRAF  
 
Weak hits:
ENSGGOP00000002249   0.0863   227-262   Trimerization domain of TRAF  
ENSGGOP00000003826   0.0602   998-1032   Trimerization domain of TRAF  
ENSGGOP00000005703   0.0288   197-232   Trimerization domain of TRAF  
ENSGGOP00000025578   0.0602   998-1032   Trimerization domain of TRAF  

Pongo abelii 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000007003   1.57e-20   364-413   Trimerization domain of TRAF  
ENSPPYP00000022191   0.00000000000146   368-406   Trimerization domain of TRAF  
 
Weak hits:
ENSPPYP00000021917   0.0863   227-262   Trimerization domain of TRAF  
ENSPPYP00000021947   0.0602   994-1028   Trimerization domain of TRAF  

Nomascus leucogenys 76_1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000010523   0.000000000000314   356-394   Trimerization domain of TRAF  
ENSNLEP00000010527   0.000000000000262   311-349   Trimerization domain of TRAF  
ENSNLEP00000019474   1.57e-20   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSNLEP00000020718   0.0863   227-262   Trimerization domain of TRAF  
ENSNLEP00000020911   0.0602   998-1032   Trimerization domain of TRAF  

Papio anubis 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000013259   1.57e-20   364-413   Trimerization domain of TRAF  
ENSPANP00000015727   0.00000000000068   311-349   Trimerization domain of TRAF  
 
Weak hits:
ENSPANP00000016995   0.0288   197-232   Trimerization domain of TRAF  
ENSPANP00000017960   0.0034   362-399   Trimerization domain of TRAF  
ENSPANP00000018903   0.0602   998-1032   Trimerization domain of TRAF  
ENSPANP00000018929   0.0863   227-262   Trimerization domain of TRAF  

Macaca mulatta 76_1 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000015131   0.000000000000251   286-324   Trimerization domain of TRAF  
ENSMMUP00000015132   0.000000000000314   361-399   Trimerization domain of TRAF  
ENSMMUP00000015133   0.000000000000262   311-349   Trimerization domain of TRAF  
ENSMMUP00000015419   1.57e-20   364-413   Trimerization domain of TRAF  
ENSMMUP00000015420   1.44e-20   339-388   Trimerization domain of TRAF  
ENSMMUP00000040224   0.000000000000209   231-269   Trimerization domain of TRAF  
 
Weak hits:
ENSMMUP00000026496   0.0863   227-262   Trimerization domain of TRAF  
ENSMMUP00000038268   0.0034   362-399   Trimerization domain of TRAF  

Callithrix jacchus 76_3.2.1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000004574   1.44e-20   339-388   Trimerization domain of TRAF  
ENSCJAP00000017896   2.54e-20   281-330   Trimerization domain of TRAF  
ENSCJAP00000017924   6.8e-18   366-406   Trimerization domain of TRAF  
ENSCJAP00000017928   1.57e-20   364-413   Trimerization domain of TRAF  
ENSCJAP00000020602   0.00000000000366   312-349   Trimerization domain of TRAF  
ENSCJAP00000020621   0.00000000000366   312-349   Trimerization domain of TRAF  
ENSCJAP00000051347   0.00000000000366   312-349   Trimerization domain of TRAF  
 
Weak hits:
ENSCJAP00000000449   0.00366   373-410   Trimerization domain of TRAF  
ENSCJAP00000000450   0.0034   362-399   Trimerization domain of TRAF  
ENSCJAP00000000453   0.00259   256-293   Trimerization domain of TRAF  
ENSCJAP00000000463   0.00314   335-373   Trimerization domain of TRAF  
ENSCJAP00000016584   0.017   337-371   Trimerization domain of TRAF  
ENSCJAP00000037272   0.0602   998-1032   Trimerization domain of TRAF  
ENSCJAP00000037273   0.0602   999-1033   Trimerization domain of TRAF  
ENSCJAP00000037736   0.00837   227-262   Trimerization domain of TRAF  
ENSCJAP00000039470   0.00392   197-232   Trimerization domain of TRAF  
ENSCJAP00000047900   0.00523   105-140   Trimerization domain of TRAF  

Otolemur garnettii 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000002199   3.14e-20   364-413   Trimerization domain of TRAF  
ENSOGAP00000011816   0.000000000000262   311-349   Trimerization domain of TRAF  
 
Weak hits:
ENSOGAP00000005041   0.0241   368-405   Trimerization domain of TRAF  
ENSOGAP00000007346   0.0288   197-232   Trimerization domain of TRAF  
ENSOGAP00000013193   0.0602   998-1032   Trimerization domain of TRAF  

Microcebus murinus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000010736   3.14e-20   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSMICP00000000740   0.0549   923-957   Trimerization domain of TRAF  
ENSMICP00000009504   0.0445   365-400   Trimerization domain of TRAF  

Rattus norvegicus 76_5.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000008253   0.00000000000102   307-345   Trimerization domain of TRAF  
ENSRNOP00000010906   9.68e-21   363-412   Trimerization domain of TRAF  
 
Weak hits:
ENSRNOP00000013378   0.0186   994-1028   Trimerization domain of TRAF  
ENSRNOP00000065556   0.0233   359-397   Trimerization domain of TRAF  

Mus musculus 76_38 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000021706   9.68e-21   363-412   Trimerization domain of TRAF  
ENSMUSP00000028311   0.00000000000102   311-349   Trimerization domain of TRAF  
ENSMUSP00000058361   9.02e-21   338-387   Trimerization domain of TRAF  
ENSMUSP00000109872   0.00000000000105   318-356   Trimerization domain of TRAF  
ENSMUSP00000112517   9.02e-21   338-387   Trimerization domain of TRAF  
 
Weak hits:
ENSMUSP00000061624   0.0602   993-1027   Trimerization domain of TRAF  
ENSMUSP00000108542   0.0602   993-1027   Trimerization domain of TRAF  

Dipodomys ordii 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000003884   0.00000000000314   310-348   Trimerization domain of TRAF  
ENSDORP00000012912   7.72e-21   282-331   Trimerization domain of TRAF  
 
Weak hits:
ENSDORP00000006131   0.0314   362-399   Trimerization domain of TRAF  
ENSDORP00000011405   0.0602   998-1032   Trimerization domain of TRAF  
ENSDORP00000015182   0.00523   225-260   Trimerization domain of TRAF  

Ictidomys tridecemlineatus 76_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000000672   9.55e-21   362-411   Trimerization domain of TRAF  
ENSSTOP00000010851   0.000000149   309-339   Trimerization domain of TRAF  
ENSSTOP00000017775   0.000000178   327-357   Trimerization domain of TRAF  
 
Weak hits:
ENSSTOP00000004286   0.0602   999-1033   Trimerization domain of TRAF  
ENSSTOP00000005401   0.0288   197-232   Trimerization domain of TRAF  
ENSSTOP00000010764   0.0314   363-400   Trimerization domain of TRAF  

Heterocephalus glaber v1.7-2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000352685   0.000000000000732   379-417   Trimerization domain of TRAF  
HGL_H00000376500   9.68e-21   363-412   Trimerization domain of TRAF  
 
Weak hits:
HGL_H00000362751   0.0602   998-1032   Trimerization domain of TRAF  
HGL_H00000362994   0.0251   225-261   Trimerization domain of TRAF  
HGL_H00000369080-2   0.0288   197-232   Trimerization domain of TRAF  
HGL_H00000389891   0.0262   386-423   Trimerization domain of TRAF  

Cavia porcellus 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000001587   9.68e-21   363-412   Trimerization domain of TRAF  
ENSCPOP00000003828   0.000000000000602   311-349   Trimerization domain of TRAF  
 
Weak hits:
ENSCPOP00000000448   0.0288   363-400   Trimerization domain of TRAF  
ENSCPOP00000002039   0.0732   227-262   Trimerization domain of TRAF  
ENSCPOP00000008806   0.0602   998-1032   Trimerization domain of TRAF  
ENSCPOP00000016521   0.0288   197-232   Trimerization domain of TRAF  

Oryctolagus cuniculus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000003184   9.68e-21   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSOCUP00000004916   0.0863   226-261   Trimerization domain of TRAF  
ENSOCUP00000007884   0.0445   363-400   Trimerization domain of TRAF  

Ochotona princeps 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000000351   7.06e-20   363-412   Trimerization domain of TRAF  
ENSOPRP00000011346   0.00000000000392   363-401   Trimerization domain of TRAF  
 
Weak hits:
ENSOPRP00000006417   0.0863   226-261   Trimerization domain of TRAF  
ENSOPRP00000008293   0.0628   362-397   Trimerization domain of TRAF  

Sus scrofa 76_10.2 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000002733   9.68e-21   364-413   Trimerization domain of TRAF  
ENSSSCP00000006248   0.000000000000968   343-381   Trimerization domain of TRAF  
ENSSSCP00000028412   9.02e-21   339-388   Trimerization domain of TRAF  
ENSSSCP00000028739   1.67e-20   308-357   Trimerization domain of TRAF  
ENSSSCP00000029902   9.68e-21   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSSSCP00000007612   0.0288   198-233   Trimerization domain of TRAF  
ENSSSCP00000016545   0.0243   279-311   Trimerization domain of TRAF  
ENSSSCP00000016546   0.012   274-308   Trimerization domain of TRAF  
ENSSSCP00000020130   0.00863   363-400   Trimerization domain of TRAF  
ENSSSCP00000021349   0.0115   256-291   Trimerization domain of TRAF  
ENSSSCP00000026537   0.00706   2092-2124   Trimerization domain of TRAF  

Bos taurus 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000013869   0.000000000000706   335-373   Trimerization domain of TRAF  
ENSBTAP00000017918   9.68e-21   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSBTAP00000008640   0.0288   197-232   Trimerization domain of TRAF  
ENSBTAP00000015940   0.0152   363-400   Trimerization domain of TRAF  

Ovis aries 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000001114   0.000000523   35-63   Trimerization domain of TRAF  
ENSOARP00000001587   0.000000392   351-380   Trimerization domain of TRAF  
ENSOARP00000005336   5.75e-18   365-415   Trimerization domain of TRAF  
 
Weak hits:
ENSOARP00000001498   0.0288   197-232   Trimerization domain of TRAF  
ENSOARP00000012628   0.0152   374-411   Trimerization domain of TRAF  
ENSOARP00000014961   0.0602   998-1032   Trimerization domain of TRAF  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000006940   6.67e-21   235-284   Trimerization domain of TRAF  
 
Weak hits:
ENSVPAP00000004831   0.00759   2482-2514   Trimerization domain of TRAF  
ENSVPAP00000005567   0.0602   997-1031   Trimerization domain of TRAF  
ENSVPAP00000009540   0.00968   269-305   Trimerization domain of TRAF  

Tursiops truncatus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000002504   0.000000000000445   314-352   Trimerization domain of TRAF  
 
Weak hits:
ENSTTRP00000008968   0.0288   197-232   Trimerization domain of TRAF  
ENSTTRP00000016076   0.0602   998-1032   Trimerization domain of TRAF  

Mustela putorius furo 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000002600   9.68e-21   365-414   Trimerization domain of TRAF  
ENSMPUP00000010903   0.000000000000445   379-417   Trimerization domain of TRAF  
 
Weak hits:
ENSMPUP00000005757   0.0968   8-51   Trimerization domain of TRAF  
ENSMPUP00000008653   0.0288   198-233   Trimerization domain of TRAF  
ENSMPUP00000014021   0.0602   998-1032   Trimerization domain of TRAF  
ENSMPUP00000015743   0.0445   363-400   Trimerization domain of TRAF  

Ailuropoda melanoleuca 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSAMEP00000014011   0.000000000000392   333-371   Trimerization domain of TRAF  
ENSAMEP00000019244   9.68e-21   364-413   Trimerization domain of TRAF  
 
Weak hits:
ENSAMEP00000001214   0.0314   363-400   Trimerization domain of TRAF  
ENSAMEP00000001224   0.034   374-411   Trimerization domain of TRAF  
ENSAMEP00000011340   0.0288   197-232   Trimerization domain of TRAF  
ENSAMEP00000011574   0.0602   998-1032   Trimerization domain of TRAF  

  1 2 3 4 5 6   Next Last
Showing genomes 1 to 25 of 128

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Trimerization domain of TRAF domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   2808 2808
No Yes Homo sapiens 76_38 Human 7 7
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 2 2
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 2 2
No Yes Macaca mulatta 76_1 Rhesus monkey 6 6
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 5 5
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 3 3
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 2 2
No Yes Sus scrofa 76_10.2 Pig 5 5
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 3 3
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 2
No Yes Canis familiaris 76_3.1 Dog 4 4
No Yes Felis catus 76_6.2 Domestic cat 2 2
No Yes Equus caballus 76_2 Horse 2 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 76_3 African savanna elephant 3 3
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   14 14
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus laevis African clawed frog 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Gadus morhua 76_1 Atlantic cod 3 3
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 5 5
No Yes Takifugu rubripes 76_4 Torafugu 29 29
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 6 6
No Yes Oryzias latipes 76_1 Japanese medaka 4 4
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 4 4
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 7 7
No Yes Astyanax mexicanus 76 Mexican tetra 3 3
No Yes Danio rerio 76_9 Zebrafish 6 6
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 5 5
No Yes Adineta vaga   2 2
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 9 9
No Yes Homo sapiens (NCBI version) Human 5 5
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 2 2
No Yes Sus scrofa 69_10.2 Pig 2 2
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 2
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 2 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 3 3
No Yes Gadus morhua 69_1 Atlantic cod 3 3
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 69_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 69_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 4 4
No Yes Danio rerio 69_9 Zebrafish 5 5
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 5 5
No Yes NCBI 2017_08 genome   1583 1583
No Yes STRING v9.0.5 (STRING)   71 71
No Yes Uniprot 2018_03 genome   549 549
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   33 33
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   41 41
No Yes TargetDB (Targets)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]