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  Home > Genomes > Trypanosoma congolense 2.4 > Variant surface glycoprotein (N-terminal domain) domains


Variant surface glycoprotein (N-terminal domain) superfamily domain assignments
in
Trypanosoma congolense 2.4

Network of domain occurrence in all genomes

Assignment details

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Trypanosoma congolense 2.4 has 122 significant domains in 119 proteins.

     

Sequence ID   Evalue   Region   Family  
psu|TcIL3000.0.01040   5.75e-19   67-287   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01050   7.98e-18   27-275   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01330   1.24e-25   30-326   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01460   3.92e-17   31-283   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01530   0.00000275   2-205   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01540   0.0000000000994   30-155   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01560   4.58e-20   28-309   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01570   7.59e-19   54-340   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.01840   9.94e-16   29-314   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.02100   0.000000000235   30-231   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.03060   8.11e-16   36-325   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.03120   0.000000497   29-133   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.04100   7.59e-21   27-265   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.04110   4.71e-21   30-313   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.04600   4.84e-20   27-277   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.06100   3.01e-19   28-277   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.07700   0.0000471   48-187   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.07710   3.01e-19   29-352   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.10130   0.0000000000000641   28-162   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.10980   3.27e-19   30-302   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.10990   3.66e-20   27-327   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11350   0.00000000051   16-93   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11360   0.000000000262   30-174   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11440   4.32e-20   273-495   Variant surface glycoprotein (N-terminal domain)  
  0.0157   2-48   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11870   1.57e-20   32-329   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11880   2.88e-19   35-317   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11900   5.89e-21   46-334   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.11910   9.94e-17   31-309   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.12350   0.000000000222   42-169   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.12360   0.0000152   11-111   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.13130   3.27e-20   30-300   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.13140   6.93e-22   30-337   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.13280   1.57e-21   46-316   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.13290   1.44e-16   30-317   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.14840   3.14e-22   20-259   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.14960   1.44e-22   63-373   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.14970   2.09e-16   30-313   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.16170   0.00000000000000222   29-319   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.16180   4.45e-21   28-306   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.18630   0.0000000000209   31-170   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.18890   8.89e-19   37-322   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.19990   6.02e-19   58-280   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.20000   4.19e-20   27-276   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.20900   5.1e-16   34-314   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.20910   2.62e-21   27-250   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.22930   0.000000000000144   40-321   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.22940   0.00000000955   15-160   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.23350   8.24e-22   27-325   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.25680   3.4e-20   29-340   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.25980   1.26e-18   43-332   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.25990   8.5e-19   30-284   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.26370   0.0000000000000034   33-262   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.27910   1.44e-17   504-722   Variant surface glycoprotein (N-terminal domain)  
  4.58e-16   27-273   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.28850   5.23e-17   328-548   Variant surface glycoprotein (N-terminal domain)  
  0.0000051   36-100   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29240   9.16e-21   46-343   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29250   8.76e-17   31-309   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29300   0.00000000000000615   31-319   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29310   0.0000000000837   17-94   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29330   0.00000000000000196   31-317   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29340   0.00000000235   16-93   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.29480   1.2e-22   28-335   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.32040   0.0000000131   29-154   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.32160   7.72e-19   80-303   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.32170   1.19e-19   26-274   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.32210   0.00000000000000222   31-264   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.32740   5.36e-18   14-276   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.32750   8.24e-19   31-318   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.33650   5.89e-20   29-258   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.33660   5.75e-19   27-278   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.34020   2.09e-18   37-268   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.34030   3.4e-17   22-279   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.34550   6.8e-17   30-254   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.34570   3.14e-21   27-333   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.36810   2.62e-16   30-314   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.37010   0.000000301   64-178   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.37390   7.85e-19   30-338   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.37400   8.89e-17   33-316   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.37970   1.44e-20   29-299   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.37980   8.5e-17   31-317   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.38680   1.83e-19   26-274   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.39800   2.88e-18   42-325   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.39960   2.49e-20   28-334   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.43120   0.0000000000000103   29-314   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.43130   2.09e-20   46-351   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.43840   3.53e-19   23-308   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.44120   0.0000759   64-175   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.44390   1.24e-20   34-321   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.45120   2.09e-16   4-179   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.46360   0.00000000222   29-151   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.46780   3.4e-16   30-322   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.46790   5.62e-19   30-246   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.48330   3.14e-21   5-268   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.48730   1.57e-19   508-737   Variant surface glycoprotein (N-terminal domain)  
  4.45e-17   27-276   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50020   3.4e-19   26-301   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50030   3.66e-23   26-317   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50230   0.00000000000000366   47-248   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50660   0.000000000068   35-163   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50680   0.00000000000000392   14-271   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50940   1.22e-19   29-335   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50950   0.000000000536   33-172   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.51200   0.000034   76-196   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.51730   0.000000000000235   19-241   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.52560   6.67e-17   31-316   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.52570   0.000000000000301   27-151   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.53330   3.79e-19   224-445   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.53950   6.02e-23   30-295   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.54160   0.00000523   76-196   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.55510   7.59e-25   25-334   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.56150   5.75e-20   27-322   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.56160   0.00000000000000327   30-317   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.57040   3.4e-19   30-301   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.57050   1.44e-19   27-271   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.57340   6.15e-18   14-276   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.57350   2.22e-16   32-314   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.58360   1.96e-20   32-338   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.58370   0.0000000000000615   36-314   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.60150   1.18e-20   30-328   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.60160   5.36e-19   35-312   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.1.100   2.09e-17   40-303   Variant surface glycoprotein (N-terminal domain)  
 
Weak hits:
psu|TcIL3000.0.01850   0.000101   66-187   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.04610   0.000405   29-82   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.26350   0.0157   10-129   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.35340   0.00602   104-144   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.39970   0.00136   82-152   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50580   0.0314   29-124   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.50670   0.00238   10-115   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.60810   0.0523   42-154   Variant surface glycoprotein (N-terminal domain)  
psu|TcIL3000.0.60820   0.0523   42-154   Variant surface glycoprotein (N-terminal domain)  

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View all assignments containing a Variant surface glycoprotein (N-terminal domain) domain in each group of genomes.

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Add assignments from individual genomes

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Select to display   Genome       Domains   Proteins
No Yes ALL   5663 5663
No Yes Octopus bimaculoides 280   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Trypanosoma vivax   206 206
No Yes Trypanosoma congolense 2.4   122 119
No Yes Trypanosoma brucei gambiense v4.1   28 27
No Yes Trypanosoma brucei TREU927 v4.1   337 336
No Yes Trypanosoma brucei Lister 427 v4.1   148 138
No Yes NCBI 2017_08 genome   121 121
No Yes Protozoadb 2010_08 (Protozoadb)   85 85
No Yes STRING v9.0.5 (STRING)   86 86
No Yes Uniprot 2018_03 genome   4133 4124
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   10 10
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   16 12
No Yes TargetDB (Targets)   8 8

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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