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Clostridium neurotoxins, "coiled-coil" domain family domain assignments
in
all bacterial genomes

Assignment details

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14 selected genomes have 15 significant domains in 15 proteins.


Clostridium tetani E88 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|28373188|ref|NP_783831.1|   2.62e-116   0.000000164   559-884   3bta A:547-871  

Clostridium botulinum A str. ATCC 3502 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|148378801|ref|YP_001253342.1|   1.18e-123   0.00000000000962   549-874   3bta A:547-871  
 
Weak hits:
gi|148378800|ref|YP_001253341.1|   1.44e-119   0.00056   498-830   3bta A:547-871  

Clostridium tetani genome 12124569 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|557606997|ref|YP_008774963.1|   1.57e-116   0.000000162   559-884   3bta A:547-871  

Clostridium botulinum H04402 065 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387817075|ref|YP_005677419.1|   6.02e-122   0.0000000000125   549-874   3bta A:547-871  
 
Weak hits:
gi|387817074|ref|YP_005677418.1|   3.92e-120   0.00058   498-830   1s0b A:534-861  

Clostridium botulinum BKT015925 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|331270960|ref|YP_004385671.1|   3.66e-111   0.000000176   545-869   1s0b A:534-861  
 
Weak hits:
gi|331270959|ref|YP_004385670.1|   1.57e-113   0.0016   499-828   1s0b A:534-861  

Clostridium botulinum F str. 230613 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384461196|ref|YP_005673791.1|   4.45e-126   0.0000000529   537-867   1s0b A:534-861  
 
Weak hits:
gi|384461195|ref|YP_005673790.1|   1.15e-117   0.00048   465-796   1s0b A:534-861  

Clostridium botulinum F str. Langeland has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153939808|ref|YP_001390123.1|   4.45e-126   0.0000000529   537-867   1s0b A:534-861  
 
Weak hits:
gi|153938941|ref|YP_001390122.1|   1.15e-117   0.00048   465-796   1s0b A:534-861  

Clostridium botulinum E3 str. Alaska E43 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|188590132|ref|YP_001920504.1|   3.66e-128   0.0000000561   518-848   1s0b A:534-861  
 
Weak hits:
gi|188589186|ref|YP_001920505.1|   6.81e-118   0.00053   465-795   3bta A:547-871  

Clostridium botulinum B1 str. Okra has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|169834607|ref|YP_001693307.1|   3.79e-126   0.00000000000831   536-861   1s0b A:534-861  
 
Weak hits:
gi|169834701|ref|YP_001693308.1|   6.28e-118   0.00052   498-828   3bta A:547-871  

Clostridium botulinum Ba4 str. 657 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|229587275|ref|YP_002860313.1|   1.7e-114   0.0000000000607   549-875   3bta A:547-871  
gi|229587402|ref|YP_002860440.1|   1.14e-126   0.0000000000175   536-861   1s0b A:534-861  
 
Weak hits:
gi|229587276|ref|YP_002860314.1|   9.29e-119   0.00039   465-796   1s0b A:534-861  
gi|229587403|ref|YP_002860441.1|   6.28e-118   0.00052   498-828   3bta A:547-871  

Clostridium botulinum A2 str. Kyoto has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|226948036|ref|YP_002803127.1|   3.14e-111   0.0000000000685   549-874   3bta A:547-871  
 
Weak hits:
gi|226948035|ref|YP_002803126.1|   4.71e-120   0.00041   465-796   1s0b A:534-861  

Clostridium botulinum A3 str. Loch Maree has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|169835008|ref|YP_001715703.1|   3.53e-111   0.0000000000847   545-870   3bta A:547-871  
 
Weak hits:
gi|169834914|ref|YP_001715702.1|   2.62e-121   0.00037   465-796   1s0b A:534-861  
gi|170760800|ref|YP_001787260.1|   0.0497   0.0094   794-869   3bta A:547-871  

Clostridium botulinum A str. Hall has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153936924|ref|YP_001386738.1|   1.18e-123   0.00000000000962   549-874   3bta A:547-871  
 
Weak hits:
gi|153935962|ref|YP_001386737.1|   1.44e-119   0.00056   498-830   3bta A:547-871  

Clostridium botulinum A str. ATCC 19397 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153931567|ref|YP_001383190.1|   1.18e-123   0.00000000000962   549-874   3bta A:547-871  
 
Weak hits:
gi|153932404|ref|YP_001383189.1|   1.44e-119   0.00056   498-830   3bta A:547-871  

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Select to display   Genome       Domains   Proteins
No Yes ALL   513 513
No Yes Clostridium tetani E88   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   2 2
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes NCBI 2017_08 genome   192 192
No Yes STRING v9.0.5 (STRING)   12 12
No Yes Uniprot 2018_03 genome   173 173
No Yes NCBI plasmid sequences (Plasmids)   9 9
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   42 42
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   59 59
No Yes UniProt viral sequences (Viral)   3 3

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