SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.


Type I dockerin domain superfamily domain assignments
in
all genomes

Assignment details

(show help)

25 selected genomes have 343 significant domains in 337 proteins.

Showing genomes 1 to 25 of 295
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Amphimedon queenslandica has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Aqu1.225933|PACid:15724461   0.0000216   1106-1179   Type I dockerin domain  
 
Weak hits:
Aqu1.201844|PACid:15700372   0.0589   10-44   Type I dockerin domain  
Aqu1.221884|PACid:15720412   0.000458   4459-4515   Type I dockerin domain  
  0.000523   6607-6663   Type I dockerin domain  
  0.00101   8252-8308   Type I dockerin domain  

Trichoplax adhaerens has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Triad1|62730|fgeneshTA2_pg.C_scaffold_540000001   0.00000405   36-92   Type I dockerin domain  

Proterospongia sp. ATCC 50818 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
PTSG_00638T0   0.0000759   3547-3612   Type I dockerin domain  
  0.000602   1904-1970   Type I dockerin domain  
  0.00654   5181-5245   Type I dockerin domain  
PTSG_06730T0   0.0000824   6245-6312   Type I dockerin domain  
PTSG_06772T0   0.00000419   1702-1756   Type I dockerin domain  
PTSG_08390T0   0.0000000981   3742-3797   Type I dockerin domain  
PTSG_09971T0   0.0000235   7034-7103   Type I dockerin domain  
 
Weak hits:
PTSG_01943T0   0.000301   5590-5655   Type I dockerin domain  
PTSG_01972T0   0.00129   1556-1622   Type I dockerin domain  
PTSG_02138T0   0.00294   2895-2964   Type I dockerin domain  
PTSG_02915T0   0.000491   3147-3215   Type I dockerin domain  
PTSG_03839T0   0.000353   5696-5760   Type I dockerin domain  
  0.00147   2441-2503   Type I dockerin domain  
  0.00366   4230-4299   Type I dockerin domain  
PTSG_06729T0   0.02   1228-1294   Type I dockerin domain  
PTSG_07261T0   0.00118   1657-1723   Type I dockerin domain  
PTSG_08442T0   0.000144   6740-6808   Type I dockerin domain  
  0.0491   8373-8440   Type I dockerin domain  

Monosiga brevicollis has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Monbr1|11672|fgenesh1_pg.scaffold_31000029   0.00000549   4082-4149   Type I dockerin domain  
jgi|Monbr1|27653|fgenesh2_pg.scaffold_20000121   0.0000167   2750-2823   Type I dockerin domain  
  0.0000167   4333-4406   Type I dockerin domain  
 
Weak hits:
jgi|Monbr1|12200|fgenesh1_pg.scaffold_36000025   0.000196   7188-7256   Type I dockerin domain  
  0.000952   8942-9014   Type I dockerin domain  
jgi|Monbr1|23706|fgenesh2_pg.scaffold_4000449   0.000157   2884-2948   Type I dockerin domain  
jgi|Monbr1|30335|fgenesh2_pg.scaffold_48000016   0.0294   6652-6716   Type I dockerin domain  
jgi|Monbr1|6041|fgenesh1_pg.scaffold_3000539   0.0235   2410-2483   Type I dockerin domain  
jgi|Monbr1|6820|fgenesh1_pg.scaffold_5000240   0.0153   1201-1265   Type I dockerin domain  

Acholeplasma laidlawii PG-8A has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ABX81729   0.0000000000216   5475-5536   Type I dockerin domain  

Gloeobacter violaceus PCC 7421 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|37519606|ref|NP_922983.1|   0.000000000994   37-94   Type I dockerin domain  
gi|37519627|ref|NP_923004.1|   0.0000000000206   28-86   Type I dockerin domain  
gi|37519628|ref|NP_923005.1|   0.0000000000109   24-81   Type I dockerin domain  
gi|37519629|ref|NP_923006.1|   0.00000000000288   20-79   Type I dockerin domain  
gi|37522175|ref|NP_925552.1|   0.00000000693   25-85   Type I dockerin domain  
gi|37522504|ref|NP_925881.1|   0.0000000216   74-130   Type I dockerin domain  

Nostoc sp. PCC 7524 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|427728612|ref|YP_007074849.1|   0.000000000275   6101-6162   Type I dockerin domain  
 
Weak hits:
gi|427730416|ref|YP_007076653.1|   0.000255   6010-6060   Type I dockerin domain  
  0.053   10666-10690,10722-10748   Type I dockerin domain  

Anabaena sp. 90 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|414077873|ref|YP_006997191.1|   0.0000108   1466-1517   Type I dockerin domain  
 
Weak hits:
gi|414079685|ref|YP_007001109.1|   0.0235   129-164   Type I dockerin domain  

Eggerthella lenta DSM 2243 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|257791565|ref|YP_003182171.1|   0.0000196   208-255   Type I dockerin domain  
 
Weak hits:
gi|257789826|ref|YP_003180432.1|   0.0981   160-185   Type I dockerin domain  

Microbacterium testaceum StLB037 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|323356642|ref|YP_004223038.1|   0.00000366   56-116   Type I dockerin domain  

Truepera radiovictrix DSM 17093 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|297623777|ref|YP_003705211.1|   0.00000265   152-201   Type I dockerin domain  

Deinococcus gobiensis I-0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386856139|ref|YP_006260316.1|   0.00000432   109-164   Type I dockerin domain  

Deinococcus deserti VCD115 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|226355392|ref|YP_002785132.1|   0.00000687   132-176   Type I dockerin domain  

Deinococcus maricopensis DSM 21211 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|320334301|ref|YP_004171012.1|   0.00000353   120-168   Type I dockerin domain  

Deinococcus geothermalis DSM 11300 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|94985746|ref|YP_605110.1|   0.00000549   129-172   Type I dockerin domain  

Deinococcus proteolyticus MRP has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|325283425|ref|YP_004255966.1|   0.0000706   120-146   Type I dockerin domain  

Deinococcus radiodurans R1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|15806421|ref|NP_295127.1|   0.00000549   13-45   Type I dockerin domain  
  0.00746   48-69   Type I dockerin domain  

Erysipelothrix rhusiopathiae str. Fujisawa has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|336065890|ref|YP_004560748.1|   0.000000000000114   533-594   Type I dockerin domain  

Clostridium clariflavum DSM 19732 has 81 significant domains in 79 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|374294576|ref|YP_005044767.1|   0.00000000000000167   497-567   Type I dockerin domain  
gi|374294785|ref|YP_005044976.1|   2.16e-17   44-114   Type I dockerin domain  
gi|374294819|ref|YP_005045010.1|   3.73e-18   407-479   Type I dockerin domain  
gi|374294824|ref|YP_005045015.1|   0.0000000000000128   42-105   Type I dockerin domain  
gi|374294924|ref|YP_005045115.1|   1.67e-17   1647-1714   Type I dockerin domain  
gi|374295147|ref|YP_005045338.1|   3.53e-16   196-266   Type I dockerin domain  
gi|374295312|ref|YP_005045503.1|   1.96e-16   524-589   Type I dockerin domain  
gi|374295317|ref|YP_005045508.1|   0.0000000000000759   829-893   Type I dockerin domain  
gi|374295334|ref|YP_005045525.1|   1.57e-17   31-101   Type I dockerin domain  
gi|374295457|ref|YP_005045648.1|   3.92e-18   35-104   Type I dockerin domain  
gi|374295461|ref|YP_005045652.1|   9.52e-18   26-91   Type I dockerin domain  
gi|374295465|ref|YP_005045656.1|   0.0000000000000334   418-480   Type I dockerin domain  
gi|374295466|ref|YP_005045657.1|   0.000000000000628   667-730   Type I dockerin domain  
gi|374295470|ref|YP_005045661.1|   0.0000000000000471   886-951   Type I dockerin domain  
gi|374295530|ref|YP_005045721.1|   0.00000000000000177   467-536   Type I dockerin domain  
gi|374295562|ref|YP_005045753.1|   0.00000000000000491   45-113   Type I dockerin domain  
gi|374295683|ref|YP_005045874.1|   8.63e-17   30-99   Type I dockerin domain  
gi|374295860|ref|YP_005046051.1|   0.000000000000345   385-445   Type I dockerin domain  
gi|374295921|ref|YP_005046112.1|   1.28e-17   282-352   Type I dockerin domain  
gi|374295925|ref|YP_005046116.1|   1.7e-17   36-104   Type I dockerin domain  
gi|374295933|ref|YP_005046124.1|   5.4e-19   550-616   Type I dockerin domain  
gi|374295935|ref|YP_005046126.1|   0.000000000000301   892-957   Type I dockerin domain  
gi|374295936|ref|YP_005046127.1|   1.37e-19   637-709   Type I dockerin domain  
gi|374295956|ref|YP_005046147.1|   0.00000000000405   508-575   Type I dockerin domain  
gi|374296137|ref|YP_005046328.1|   1.57e-17   463-533   Type I dockerin domain  
gi|374296148|ref|YP_005046339.1|   6.08e-18   724-794   Type I dockerin domain  
gi|374296153|ref|YP_005046344.1|   1.86e-18   271-340   Type I dockerin domain  
gi|374296166|ref|YP_005046357.1|   1.08e-18   518-588   Type I dockerin domain  
gi|374296203|ref|YP_005046394.1|   1.08e-16   30-99   Type I dockerin domain  
gi|374296204|ref|YP_005046395.1|   3.04e-18   909-981   Type I dockerin domain  
gi|374296205|ref|YP_005046396.1|   3.14e-18   884-953   Type I dockerin domain  
gi|374296210|ref|YP_005046401.1|   9.22e-18   26-95   Type I dockerin domain  
gi|374296231|ref|YP_005046422.1|   0.000000000000118   47-109   Type I dockerin domain  
gi|374296310|ref|YP_005046501.1|   3.63e-17   488-557   Type I dockerin domain  
gi|374296316|ref|YP_005046507.1|   5.79e-16   493-560   Type I dockerin domain  
gi|374296377|ref|YP_005046568.1|   0.00000000000000226   37-106   Type I dockerin domain  
gi|374296413|ref|YP_005046604.1|   0.0000000000373   596-659   Type I dockerin domain  
gi|374296426|ref|YP_005046617.1|   0.00000000000000128   26-91   Type I dockerin domain  
gi|374296427|ref|YP_005046618.1|   0.0000000000000128   536-598   Type I dockerin domain  
gi|374296519|ref|YP_005046710.1|   0.00000000523   1313-1369   Type I dockerin domain  
gi|374296550|ref|YP_005046741.1|   0.00000000000147   644-708   Type I dockerin domain  
gi|374296591|ref|YP_005046782.1|   0.0000000654   8-45   Type I dockerin domain  
gi|374296596|ref|YP_005046787.1|   9.52e-18   41-112   Type I dockerin domain  
gi|374296670|ref|YP_005046861.1|   3.92e-16   70-146   Type I dockerin domain  
gi|374296745|ref|YP_005046936.1|   1.37e-16   482-546   Type I dockerin domain  
gi|374296746|ref|YP_005046937.1|   0.00000000000000157   245-308   Type I dockerin domain  
gi|374296749|ref|YP_005046940.1|   8.63e-16   384-452   Type I dockerin domain  
gi|374296755|ref|YP_005046946.1|   0.0000000000000294   432-495   Type I dockerin domain  
gi|374296796|ref|YP_005046987.1|   1.77e-16   37-104   Type I dockerin domain  
gi|374296797|ref|YP_005046988.1|   0.0000000000000115   43-107   Type I dockerin domain  
gi|374296992|ref|YP_005047183.1|   0.0000000000667   133-179   Type I dockerin domain  
gi|374297002|ref|YP_005047193.1|   0.00000000000000657   80-140   Type I dockerin domain  
gi|374297033|ref|YP_005047224.1|   2.55e-17   602-673   Type I dockerin domain  
gi|374297049|ref|YP_005047240.1|   0.0000000000000746   503-570   Type I dockerin domain  
gi|374297272|ref|YP_005047463.1|   1.57e-18   873-942   Type I dockerin domain  
gi|374297297|ref|YP_005047488.1|   1.47e-17   760-829   Type I dockerin domain  
gi|374297322|ref|YP_005047513.1|   3.04e-17   534-605   Type I dockerin domain  
gi|374297392|ref|YP_005047583.1|   4.02e-17   341-409   Type I dockerin domain  
gi|374297405|ref|YP_005047596.1|   3.73e-17   47-116   Type I dockerin domain  
gi|374297457|ref|YP_005047648.1|   2.55e-16   89-157   Type I dockerin domain  
gi|374297487|ref|YP_005047678.1|   0.0000000000000608   431-492   Type I dockerin domain  
gi|374297501|ref|YP_005047692.1|   0.00000000000000536   678-744   Type I dockerin domain  
gi|374297503|ref|YP_005047694.1|   6.54e-19   468-534   Type I dockerin domain  
gi|374297541|ref|YP_005047732.1|   0.000000000000687   1055-1126   Type I dockerin domain  
gi|374297542|ref|YP_005047733.1|   0.00000000153   1651-1706   Type I dockerin domain  
gi|374297560|ref|YP_005047751.1|   7.72e-17   402-467   Type I dockerin domain  
gi|374297588|ref|YP_005047779.1|   0.000000000000657   172-240   Type I dockerin domain  
  0.0000000000392   39-94   Type I dockerin domain  
  0.000000000128   115-167   Type I dockerin domain  
gi|374297593|ref|YP_005047784.1|   0.00000000000000687   658-719   Type I dockerin domain  
gi|374297626|ref|YP_005047817.1|   0.00000000126   591-645   Type I dockerin domain  
gi|374298090|ref|YP_005048281.1|   0.000000000000294   813-875   Type I dockerin domain  
gi|374298093|ref|YP_005048284.1|   4.32e-16   36-106   Type I dockerin domain  
gi|374298105|ref|YP_005048296.1|   0.0000000000000392   500-562   Type I dockerin domain  
gi|374298127|ref|YP_005048318.1|   0.00000000912   595-661   Type I dockerin domain  
gi|374298139|ref|YP_005048330.1|   0.00000000000000196   22-89   Type I dockerin domain  
gi|374298176|ref|YP_005048367.1|   0.00000000000128   664-726   Type I dockerin domain  
gi|374298181|ref|YP_005048372.1|   1.77e-17   376-444   Type I dockerin domain  
gi|374298203|ref|YP_005048394.1|   7.36e-18   323-393   Type I dockerin domain  
gi|374298289|ref|YP_005048480.1|   1.77e-17   32-98   Type I dockerin domain  
gi|374298325|ref|YP_005048516.1|   2.45e-16   32-103   Type I dockerin domain  

Clostridium cellulolyticum H10 has 62 significant domains in 62 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|220927689|ref|YP_002504598.1|   0.0000000000000157   655-713   Type I dockerin domain  
gi|220927744|ref|YP_002504653.1|   0.00000000000000128   33-94   Type I dockerin domain  
gi|220927835|ref|YP_002504744.1|   0.000000000000144   664-731   Type I dockerin domain  
gi|220927872|ref|YP_002504781.1|   2.16e-16   777-847   Type I dockerin domain  
gi|220927883|ref|YP_002504792.1|   0.000000000000837   547-612   Type I dockerin domain  
gi|220928101|ref|YP_002505010.1|   4.02e-17   464-532   Type I dockerin domain  
gi|220928179|ref|YP_002505088.1|   7.06e-16   663-720   Type I dockerin domain  
gi|220928180|ref|YP_002505089.1|   0.000000000000235   403-459   Type I dockerin domain  
gi|220928181|ref|YP_002505090.1|   2.09e-17   659-724   Type I dockerin domain  
gi|220928182|ref|YP_002505091.1|   0.00000000000017   822-884   Type I dockerin domain  
gi|220928184|ref|YP_002505093.1|   0.00000000000000536   678-736   Type I dockerin domain  
gi|220928185|ref|YP_002505094.1|   0.00000000000000523   701-757   Type I dockerin domain  
gi|220928186|ref|YP_002505095.1|   0.000000000000301   28-94   Type I dockerin domain  
gi|220928187|ref|YP_002505096.1|   0.00000000000000589   468-526   Type I dockerin domain  
gi|220928188|ref|YP_002505097.1|   0.00000000000000285   619-675   Type I dockerin domain  
gi|220928189|ref|YP_002505098.1|   0.0000000000000051   476-533   Type I dockerin domain  
gi|220928199|ref|YP_002505108.1|   4.71e-16   232-298   Type I dockerin domain  
gi|220928201|ref|YP_002505110.1|   0.00000000000000981   510-575   Type I dockerin domain  
gi|220928202|ref|YP_002505111.1|   0.0000000000968   715-775   Type I dockerin domain  
gi|220928204|ref|YP_002505113.1|   0.0000000000000255   585-643   Type I dockerin domain  
gi|220928287|ref|YP_002505196.1|   0.000000000000123   527-583   Type I dockerin domain  
gi|220928359|ref|YP_002505268.1|   4.05e-16   324-391   Type I dockerin domain  
gi|220928368|ref|YP_002505277.1|   2.06e-16   351-421   Type I dockerin domain  
gi|220928491|ref|YP_002505400.1|   0.00000000000000952   230-294   Type I dockerin domain  
gi|220928529|ref|YP_002505438.1|   0.00000000000000981   410-474   Type I dockerin domain  
gi|220928531|ref|YP_002505440.1|   1.1e-17   29-95   Type I dockerin domain  
gi|220928635|ref|YP_002505544.1|   6.02e-16   808-873   Type I dockerin domain  
gi|220928656|ref|YP_002505565.1|   0.0000000000000108   465-533   Type I dockerin domain  
gi|220928657|ref|YP_002505566.1|   0.00000000000000108   476-540   Type I dockerin domain  
gi|220928658|ref|YP_002505567.1|   0.0000000000000054   458-524   Type I dockerin domain  
gi|220928659|ref|YP_002505568.1|   0.000000000000922   426-489   Type I dockerin domain  
gi|220928660|ref|YP_002505569.1|   2.55e-16   683-745   Type I dockerin domain  
gi|220928661|ref|YP_002505570.1|   6.28e-16   471-534   Type I dockerin domain  
gi|220928662|ref|YP_002505571.1|   0.000000000000157   445-508   Type I dockerin domain  
gi|220928663|ref|YP_002505572.1|   5.3e-16   889-953   Type I dockerin domain  
gi|220928664|ref|YP_002505573.1|   0.00000000000000314   537-600   Type I dockerin domain  
gi|220928665|ref|YP_002505574.1|   0.0000000000000559   1056-1119   Type I dockerin domain  
gi|220928666|ref|YP_002505575.1|   0.0000000000000108   948-1012   Type I dockerin domain  
gi|220928667|ref|YP_002505576.1|   4.51e-17   473-539   Type I dockerin domain  
gi|220928668|ref|YP_002505577.1|   3.53e-16   1100-1163   Type I dockerin domain  
gi|220928669|ref|YP_002505578.1|   6.57e-16   564-627   Type I dockerin domain  
gi|220928672|ref|YP_002505581.1|   0.000000000000222   493-548   Type I dockerin domain  
gi|220928673|ref|YP_002505582.1|   0.0000000000053   497-551   Type I dockerin domain  
gi|220928676|ref|YP_002505585.1|   0.000000000000366   626-685   Type I dockerin domain  
gi|220928724|ref|YP_002505633.1|   1.83e-16   413-475   Type I dockerin domain  
gi|220928973|ref|YP_002505882.1|   0.0000000000000177   414-478   Type I dockerin domain  
gi|220928974|ref|YP_002505883.1|   0.0000000000000373   520-582   Type I dockerin domain  
gi|220929020|ref|YP_002505929.1|   8.93e-16   402-470   Type I dockerin domain  
gi|220929070|ref|YP_002505979.1|   0.0000000000000353   884-948   Type I dockerin domain  
gi|220929077|ref|YP_002505986.1|   0.00000000000000128   49-115   Type I dockerin domain  
gi|220929078|ref|YP_002505987.1|   0.00000000000000795   886-949   Type I dockerin domain  
gi|220929230|ref|YP_002506139.1|   0.00000000000000471   50-117   Type I dockerin domain  
gi|220929434|ref|YP_002506343.1|   0.0000000000000432   237-302   Type I dockerin domain  
gi|220929538|ref|YP_002506447.1|   5.59e-17   39-109   Type I dockerin domain  
gi|220929575|ref|YP_002506484.1|   0.0000000000000458   40-104   Type I dockerin domain  
gi|220929656|ref|YP_002506565.1|   0.000000000000005   384-450   Type I dockerin domain  
gi|220929744|ref|YP_002506653.1|   1.77e-17   473-538   Type I dockerin domain  
gi|220929796|ref|YP_002506705.1|   0.0000000000942   817-872   Type I dockerin domain  
gi|220929799|ref|YP_002506708.1|   0.00000000000000206   42-108   Type I dockerin domain  
gi|220929842|ref|YP_002506751.1|   0.0000000000000366   797-867   Type I dockerin domain  
gi|220929929|ref|YP_002506838.1|   0.000000000000405   35-100   Type I dockerin domain  
gi|220930020|ref|YP_002506929.1|   0.0000000000000422   762-824   Type I dockerin domain  

Clostridium thermocellum ATCC 27405 has 73 significant domains in 71 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|125972540|ref|YP_001036450.1|   6.67e-19   174-242   Type I dockerin domain  
gi|125972556|ref|YP_001036466.1|   3.63e-20   521-589   Type I dockerin domain  
gi|125972567|ref|YP_001036477.1|   1.09e-17   676-741   Type I dockerin domain  
gi|125972568|ref|YP_001036478.1|   5.49e-16   469-531   Type I dockerin domain  
gi|125972714|ref|YP_001036624.1|   1.83e-19   146-214   Type I dockerin domain  
gi|125972715|ref|YP_001036625.1|   1.57e-17   126-194   Type I dockerin domain  
gi|125972735|ref|YP_001036645.1|   3.04e-17   269-332   Type I dockerin domain  
gi|125972761|ref|YP_001036671.1|   1.44e-18   981-1049   Type I dockerin domain  
gi|125972768|ref|YP_001036678.1|   3.04e-17   29-99   Type I dockerin domain  
gi|125972780|ref|YP_001036690.1|   1.37e-18   35-103   Type I dockerin domain  
gi|125972791|ref|YP_001036701.1|   7.98e-22   411-477   Type I dockerin domain  
gi|125972792|ref|YP_001036702.1|   4.22e-19   415-483   Type I dockerin domain  
gi|125972796|ref|YP_001036706.1|   1.57e-16   480-554   Type I dockerin domain  
gi|125972926|ref|YP_001036836.1|   0.00000000000000177   462-524   Type I dockerin domain  
gi|125972933|ref|YP_001036843.1|   7.19e-20   829-894   Type I dockerin domain  
gi|125972934|ref|YP_001036844.1|   1.24e-19   1158-1223   Type I dockerin domain  
gi|125972954|ref|YP_001036864.1|   5.3e-19   721-788   Type I dockerin domain  
gi|125972956|ref|YP_001036866.1|   5.4e-17   35-104   Type I dockerin domain  
gi|125972959|ref|YP_001036869.1|   0.00000000657   68-127   Type I dockerin domain  
gi|125973055|ref|YP_001036965.1|   8.14e-20   497-562   Type I dockerin domain  
gi|125973062|ref|YP_001036972.1|   1.18e-16   666-738   Type I dockerin domain  
gi|125973097|ref|YP_001037007.1|   5.4e-17   663-734   Type I dockerin domain  
gi|125973142|ref|YP_001037052.1|   1.44e-18   1288-1352   Type I dockerin domain  
gi|125973143|ref|YP_001037053.1|   2.75e-18   640-710   Type I dockerin domain  
gi|125973158|ref|YP_001037068.1|   2.75e-20   511-580   Type I dockerin domain  
gi|125973178|ref|YP_001037088.1|   3.24e-17   708-770   Type I dockerin domain  
gi|125973179|ref|YP_001037089.1|   2.55e-16   505-566   Type I dockerin domain  
gi|125973247|ref|YP_001037157.1|   1.7e-20   31-98   Type I dockerin domain  
gi|125973263|ref|YP_001037173.1|   4.84e-18   663-728   Type I dockerin domain  
gi|125973315|ref|YP_001037225.1|   7.65e-19   410-481   Type I dockerin domain  
gi|125973316|ref|YP_001037226.1|   6.38e-16   467-527   Type I dockerin domain  
gi|125973339|ref|YP_001037249.1|   5.1e-17   482-551   Type I dockerin domain  
gi|125973343|ref|YP_001037253.1|   1.77e-18   580-648   Type I dockerin domain  
gi|125973429|ref|YP_001037339.1|   5e-18   729-797   Type I dockerin domain  
gi|125973786|ref|YP_001037696.1|   9.68e-19   613-678   Type I dockerin domain  
gi|125973912|ref|YP_001037822.1|   7.46e-19   774-840   Type I dockerin domain  
gi|125973914|ref|YP_001037824.1|   7.55e-20   346-414   Type I dockerin domain  
gi|125973984|ref|YP_001037894.1|   5.79e-16   827-899   Type I dockerin domain  
gi|125974310|ref|YP_001038220.1|   0.00000000131   2121-2173   Type I dockerin domain  
gi|125974342|ref|YP_001038252.1|   8.93e-17   554-617   Type I dockerin domain  
gi|125974394|ref|YP_001038304.1|   1.96e-19   27-94   Type I dockerin domain  
gi|125974464|ref|YP_001038374.1|   1.67e-16   428-492   Type I dockerin domain  
gi|125974530|ref|YP_001038440.1|   0.00000000000000131   739-806   Type I dockerin domain  
gi|125974579|ref|YP_001038489.1|   2.09e-19   674-740   Type I dockerin domain  
gi|125974624|ref|YP_001038534.1|   2.16e-18   719-788   Type I dockerin domain  
gi|125974625|ref|YP_001038535.1|   4.97e-18   509-576   Type I dockerin domain  
gi|125974626|ref|YP_001038536.1|   8.93e-18   914-982   Type I dockerin domain  
gi|125974633|ref|YP_001038543.1|   2.35e-17   586-656   Type I dockerin domain  
gi|125974664|ref|YP_001038574.1|   5.49e-19   387-457   Type I dockerin domain  
gi|125974678|ref|YP_001038588.1|   4.84e-16   884-946   Type I dockerin domain  
gi|125974679|ref|YP_001038589.1|   2.06e-16   438-500   Type I dockerin domain  
gi|125974680|ref|YP_001038590.1|   6.28e-16   903-964   Type I dockerin domain  
gi|125974681|ref|YP_001038591.1|   1.47e-17   467-532   Type I dockerin domain  
gi|125974756|ref|YP_001038666.1|   3.04e-16   106-175   Type I dockerin domain  
  0.0000000000000144   34-103   Type I dockerin domain  
gi|125974845|ref|YP_001038755.1|   3.24e-18   860-927   Type I dockerin domain  
gi|125975033|ref|YP_001038943.1|   9.71e-19   252-323   Type I dockerin domain  
gi|125975073|ref|YP_001038983.1|   4.51e-18   571-638   Type I dockerin domain  
gi|125975242|ref|YP_001039152.1|   6.87e-17   895-961   Type I dockerin domain  
gi|125975243|ref|YP_001039153.1|   1.47e-20   636-706   Type I dockerin domain  
gi|125975293|ref|YP_001039203.1|   4.12e-21   520-590   Type I dockerin domain  
gi|125975294|ref|YP_001039204.1|   2.25e-18   544-610   Type I dockerin domain  
gi|125975353|ref|YP_001039263.1|   3.79e-18   497-564   Type I dockerin domain  
gi|125975360|ref|YP_001039270.1|   4.32e-18   35-101   Type I dockerin domain  
gi|125975430|ref|YP_001039340.1|   8.04e-18   500-567   Type I dockerin domain  
gi|125975431|ref|YP_001039341.1|   5.98e-19   356-425   Type I dockerin domain  
gi|125975452|ref|YP_001039362.1|   4.45e-19   391-457   Type I dockerin domain  
gi|125975491|ref|YP_001039401.1|   4.41e-21   561-629   Type I dockerin domain  
gi|125975556|ref|YP_001039466.1|   0.000000000144   1794-1850   Type I dockerin domain  
gi|125975610|ref|YP_001039520.1|   8.44e-21   345-410   Type I dockerin domain  
gi|125975614|ref|YP_001039524.1|   0.0000000000000327   305-374   Type I dockerin domain  
  0.000000000000196   234-294   Type I dockerin domain  
gi|125975619|ref|YP_001039529.1|   1.47e-18   403-474   Type I dockerin domain  
 
Weak hits:
gi|125972633|ref|YP_001036543.1|   0.00017   51-90   Type I dockerin domain  

Ruminococcus bromii has 27 significant domains in 26 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|479150193|ref|YP_007780369.1|   0.0000000157   554-618   Type I dockerin domain  
gi|479150221|ref|YP_007780397.1|   0.00000000000255   36-92   Type I dockerin domain  
gi|479150321|ref|YP_007780497.1|   0.000000000412   475-547   Type I dockerin domain  
gi|479150323|ref|YP_007780499.1|   0.000000000932   398-469   Type I dockerin domain  
gi|479150435|ref|YP_007780611.1|   0.00000000458   487-546   Type I dockerin domain  
gi|479150437|ref|YP_007780613.1|   0.000000000245   492-548   Type I dockerin domain  
gi|479150479|ref|YP_007780655.1|   0.0000000000343   451-509   Type I dockerin domain  
gi|479150525|ref|YP_007780701.1|   0.000000324   9-65   Type I dockerin domain  
gi|479150553|ref|YP_007780729.1|   0.000000288   175-231   Type I dockerin domain  
gi|479150641|ref|YP_007780817.1|   0.0000000000955   1295-1353   Type I dockerin domain  
gi|479150671|ref|YP_007780847.1|   0.00000000000579   244-302   Type I dockerin domain  
gi|479150994|ref|YP_007781170.1|   0.0000196   1019-1082   Type I dockerin domain  
gi|479151211|ref|YP_007781387.1|   0.000000000617   802-859   Type I dockerin domain  
gi|479151226|ref|YP_007781402.1|   0.0000343   187-245   Type I dockerin domain  
gi|479151248|ref|YP_007781424.1|   0.000000209   189-246   Type I dockerin domain  
gi|479151288|ref|YP_007781464.1|   0.00000000000108   676-732   Type I dockerin domain  
gi|479151295|ref|YP_007781471.1|   0.00000000209   387-439   Type I dockerin domain  
gi|479151399|ref|YP_007781575.1|   0.00000000000608   571-628   Type I dockerin domain  
gi|479151431|ref|YP_007781607.1|   0.0000706   1-46   Type I dockerin domain  
gi|479151573|ref|YP_007781749.1|   0.00000000000226   230-286   Type I dockerin domain  
gi|479151632|ref|YP_007781808.1|   0.000000000379   187-242   Type I dockerin domain  
gi|479151633|ref|YP_007781809.1|   0.00000000000876   636-692   Type I dockerin domain  
gi|479151650|ref|YP_007781826.1|   0.00000000145   206-261   Type I dockerin domain  
gi|479151704|ref|YP_007781880.1|   0.00000000000608   655-710   Type I dockerin domain  
  0.0000000157   579-635   Type I dockerin domain  
gi|479151781|ref|YP_007781957.1|   0.0000000000147   747-803   Type I dockerin domain  
gi|479151871|ref|YP_007782047.1|   0.00000000000981   460-515   Type I dockerin domain  

Ruminococcus albus 7 has 60 significant domains in 60 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|317054908|ref|YP_004103375.1|   0.0000000000746   409-468   Type I dockerin domain  
gi|317055030|ref|YP_004103497.1|   0.000000000693   1131-1190   Type I dockerin domain  
gi|317055046|ref|YP_004103513.1|   0.00000000000196   442-502   Type I dockerin domain  
gi|317055047|ref|YP_004103514.1|   0.000000000628   589-644   Type I dockerin domain  
gi|317055051|ref|YP_004103518.1|   0.000000000000981   493-550   Type I dockerin domain  
gi|317055092|ref|YP_004103559.1|   0.0000000746   810-870   Type I dockerin domain  
gi|317055207|ref|YP_004103674.1|   0.00000000000131   558-622   Type I dockerin domain  
gi|317055280|ref|YP_004103747.1|   0.000000000876   542-601   Type I dockerin domain  
gi|317055335|ref|YP_004103802.1|   0.00000000128   262-321   Type I dockerin domain  
gi|317055349|ref|YP_004103816.1|   0.000000000209   2098-2157   Type I dockerin domain  
gi|317055439|ref|YP_004103906.1|   0.00000785   756-820   Type I dockerin domain  
  0.00961   47-83   Type I dockerin domain  
gi|317055470|ref|YP_004103937.1|   0.000000000118   314-383   Type I dockerin domain  
gi|317055512|ref|YP_004103979.1|   0.0000000000562   540-599   Type I dockerin domain  
gi|317055557|ref|YP_004104024.1|   0.00000235   498-573   Type I dockerin domain  
gi|317055651|ref|YP_004104118.1|   0.000000000392   60-119   Type I dockerin domain  
gi|317055715|ref|YP_004104182.1|   0.000000000017   227-285   Type I dockerin domain  
gi|317055739|ref|YP_004104206.1|   0.00000000000379   209-273   Type I dockerin domain  
gi|317055764|ref|YP_004104231.1|   0.000000000419   576-635   Type I dockerin domain  
gi|317055773|ref|YP_004104240.1|   0.0000000108   358-428   Type I dockerin domain  
gi|317055775|ref|YP_004104242.1|   0.0000000000353   383-439   Type I dockerin domain  
gi|317055776|ref|YP_004104243.1|   0.00000123   853-914   Type I dockerin domain  
gi|317055843|ref|YP_004104310.1|   0.000000000000863   536-591   Type I dockerin domain  
gi|317055933|ref|YP_004104400.1|   0.0000000144   1236-1294   Type I dockerin domain  
gi|317056049|ref|YP_004104516.1|   0.0000000000569   533-601   Type I dockerin domain  
gi|317056050|ref|YP_004104517.1|   0.000000157   773-826   Type I dockerin domain  
gi|317056112|ref|YP_004104579.1|   0.0000000000641   33-87   Type I dockerin domain  
gi|317056128|ref|YP_004104595.1|   0.000000000363   1233-1293   Type I dockerin domain  
gi|317056154|ref|YP_004104621.1|   0.000000000235   896-960   Type I dockerin domain  
gi|317056160|ref|YP_004104627.1|   0.000000000114   67-125   Type I dockerin domain  
gi|317056209|ref|YP_004104676.1|   0.000005   39-105   Type I dockerin domain  
gi|317056225|ref|YP_004104692.1|   0.000000000379   1887-1946   Type I dockerin domain  
gi|317056573|ref|YP_004105040.1|   0.000000000275   792-847   Type I dockerin domain  
gi|317056677|ref|YP_004105144.1|   0.000000419   503-560   Type I dockerin domain  
gi|317056854|ref|YP_004105321.1|   0.0000000000657   261-319   Type I dockerin domain  
gi|317056975|ref|YP_004105442.1|   0.00000000000647   329-386   Type I dockerin domain  
gi|317057004|ref|YP_004105471.1|   0.000000000559   477-532   Type I dockerin domain  
gi|317057031|ref|YP_004105498.1|   0.00000000265   432-489   Type I dockerin domain  
gi|317057139|ref|YP_004105606.1|   0.0000000000863   31-85   Type I dockerin domain  
gi|317057281|ref|YP_004105748.1|   0.0000000000726   30-86   Type I dockerin domain  
gi|317057376|ref|YP_004105843.1|   0.000000000981   444-504   Type I dockerin domain  
gi|317057377|ref|YP_004105844.1|   0.000000000562   539-595   Type I dockerin domain  
gi|317057411|ref|YP_004105878.1|   0.000000000873   267-318   Type I dockerin domain  
gi|317057542|ref|YP_004106009.1|   0.0000000314   793-850   Type I dockerin domain  
gi|317057592|ref|YP_004106059.1|   0.00000000000942   31-89   Type I dockerin domain  
gi|317057613|ref|YP_004106080.1|   0.00000000301   579-638   Type I dockerin domain  
gi|317057637|ref|YP_004106104.1|   0.0000000000889   558-613   Type I dockerin domain  
gi|317057669|ref|YP_004106136.1|   0.000000000265   103-159   Type I dockerin domain  
gi|317057734|ref|YP_004106201.1|   0.000000000118   322-377   Type I dockerin domain  
gi|317057819|ref|YP_004106286.1|   0.0000000000598   384-441   Type I dockerin domain  
gi|317057836|ref|YP_004106303.1|   0.0000000000262   27-86   Type I dockerin domain  
gi|317133774|ref|YP_004089685.1|   0.000000000209   515-574   Type I dockerin domain  
gi|317133924|ref|YP_004089835.1|   0.0000000000598   476-536   Type I dockerin domain  
gi|317133948|ref|YP_004089859.1|   0.00000000000419   56-114   Type I dockerin domain  
gi|317133958|ref|YP_004089869.1|   0.00000000706   34-94   Type I dockerin domain  
gi|317133973|ref|YP_004089884.1|   0.00000000101   30-100   Type I dockerin domain  
gi|317133979|ref|YP_004089890.1|   0.00000000981   590-642   Type I dockerin domain  
gi|317134002|ref|YP_004089913.1|   0.0000000000118   581-642   Type I dockerin domain  
gi|317134052|ref|YP_004089963.1|   0.00000000000343   75-135   Type I dockerin domain  
gi|319788706|ref|YP_004090021.1|   0.00000000000000775   353-413   Type I dockerin domain  
gi|319788772|ref|YP_004090087.1|   0.00000000051   65-115   Type I dockerin domain  

Desulfotomaculum acetoxidans DSM 771 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|258515197|ref|YP_003191419.1|   0.0000000288   432-482   Type I dockerin domain  
gi|258515199|ref|YP_003191421.1|   0.0000000422   504-554   Type I dockerin domain  
gi|258515201|ref|YP_003191423.1|   0.0000000981   782-832   Type I dockerin domain  
gi|258515206|ref|YP_003191428.1|   0.000000363   1093-1141   Type I dockerin domain  
gi|258515209|ref|YP_003191431.1|   0.000000795   1450-1498   Type I dockerin domain  
gi|258515212|ref|YP_003191434.1|   0.00000000334   914-965   Type I dockerin domain  
gi|258515214|ref|YP_003191436.1|   0.0000000147   822-873   Type I dockerin domain  
gi|258515215|ref|YP_003191437.1|   0.0000000373   1977-2028   Type I dockerin domain  
gi|258515217|ref|YP_003191439.1|   0.00000196   2340-2390   Type I dockerin domain  
gi|258515224|ref|YP_003191446.1|   0.00000186   1682-1729   Type I dockerin domain  

Acetobacterium woodii DSM 1030 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|379011007|ref|YP_005268819.1|   0.000000112   89-151   Type I dockerin domain  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
Showing genomes 1 to 25 of 295

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Type I dockerin domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   31323 31323
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   3 2
No Yes Acholeplasma laidlawii PG-8A   1 1
No Yes Gloeobacter violaceus PCC 7421   6 6
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium clariflavum DSM 19732   81 79
No Yes Clostridium cellulolyticum H10   62 62
No Yes Clostridium thermocellum ATCC 27405   73 71
No Yes Ruminococcus bromii   27 26
No Yes Ruminococcus albus 7   60 60
No Yes Desulfotomaculum acetoxidans DSM 771   10 10
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   5 5
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   72 72
No Yes Clostridium perfringens ATCC 13124   4 4
No Yes Clostridium cellulovorans 743B   45 44
No Yes Clostridium acetobutylicum ATCC 824   10 10
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Paenibacillus sp. JDR-2   8 8
No Yes Paenibacillus mucilaginosus 3016   9 9
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Oceanobacillus iheyensis HTE831   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   2 2
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   7 7
No Yes Haliscomenobacter hydrossis DSM 1100   18 18
No Yes Salinibacter ruber M8   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   7 7
No Yes Rhodopirellula baltica SH 1   18 18
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Caldisericum exile AZM16c01   2 2
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfatibacillum alkenivorans AK-01   18 18
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Geobacter daltonii FRC-32   4 4
No Yes Geobacter uraniireducens Rf4   7 7
No Yes Geobacter sulfurreducens KN400   4 4
No Yes Geobacter metallireducens GS-15   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Methanocella conradii HZ254   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   3 3
No Yes Methanosaeta concilii GP6   8 8
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   3 3
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosphaerula palustris E1-9c   36 36
No Yes Methanospirillum hungatei JF-1   4 4
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   8 8
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   2 2
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrialba magadii ATCC 43099   2 2
No Yes Halogeometricum borinquense DSM 11551   2 2
No Yes Haloferax mediterranei ATCC 33500   2 2
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   3 3
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   4 4
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanotorris igneus Kol 5   2 2
No Yes methanocaldococcus infernus ME   3 3
No Yes Methanothermococcus okinawensis IH1   4 4
No Yes Methanococcus aeolicus Nankai-3   3 3
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   1 1
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Cyanothece sp. PCC 7822   3 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   7 7
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Clostridium thermocellum DSM 1313   78 76
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Ruminococcus champanellensis 18P13   63 62
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   8 8
No Yes Clostridium perfringens str. 13   3 3
No Yes Clostridium acetobutylicum DSM 1731   10 10
No Yes Clostridium acetobutylicum EA 2018   10 10
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus mucilaginosus KNP414   9 9
No Yes Paenibacillus mucilaginosus K02   8 8
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Singulisphaera acidiphila DSM 18658   3 3
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Geobacter sulfurreducens PCA   4 4
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   4 4
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   3 3
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   9 9
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Halorhabdus tiamatea SARL4B   7 7
No Yes Haloarcula hispanica N601   2 2
No Yes Methanococcus maripaludis X1   2 2
No Yes Acholeplasma laidlawii PG-8A (duplicate)   1 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   135 134
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   97 97
No Yes 4_Deep_abyss (meta-genome)   8 8
No Yes 5_050719P (meta-genome)   142 142
No Yes 5_Below_upper_mesopelagic (meta-genome)   3 3
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   12 12
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   15 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   11 11
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   58 58
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   33 33
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   13 13
No Yes Human Gut Community Subject 8 (meta-genome)   18 18
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   55 55
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   7 7
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   75 75
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   29 29
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   25 25
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   6 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   8 8
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   10 10
No Yes NCBI 2017_08 genome   11161 11071
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   29 29
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   13 13
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   36 36
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   70 70
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   16 16
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   24 24
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   349 346
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   30 30
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   15933 15737
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   35 35
No Yes Global Ocean Sampling Expedition (GOS)   766 765
No Yes NCBI plasmid sequences (Plasmids)   22 22
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   47 47
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   69 69
No Yes TargetDB (Targets)   46 44

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]