SUPERFAMILY 1.75 HMM library and genome assignments server

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Type I dockerin domain superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 274 significant domains in 274 proteins.

Showing genomes 226 to 250 of 295
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Cyphomyrmex longiscapus fungus garden (meta-genome) has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
2031689072   0.0000000114   64-126   Type I dockerin domain  
2031775624   0.00000000116   7-63   Type I dockerin domain  
2031825678   0.0000017   4-48   Type I dockerin domain  
 
Weak hits:
2031688830   0.0062   61-93   Type I dockerin domain  
2031690803   0.0157   12-35   Type I dockerin domain  
2031709062   0.0381   39-79   Type I dockerin domain  
2031710217   0.00484   51-98   Type I dockerin domain  
2031729044   0.0667   114-133   Type I dockerin domain  
2031742535   0.0184   41-67   Type I dockerin domain  
2031777906   0.00366   36-60   Type I dockerin domain  
2031797920   0.00451   26-51   Type I dockerin domain  
2031855015   0.00294   52-84   Type I dockerin domain  

Dump bottom (Dump bottom) (meta-genome) has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
2034878323   0.0000118   82-130   Type I dockerin domain  
2035054216   0.000017   3-39   Type I dockerin domain  
2035086055   0.000000618   18-70   Type I dockerin domain  
2035125960   0.0000000144   53-118   Type I dockerin domain  
 
Weak hits:
2034622887   0.0222   67-95   Type I dockerin domain  
2034639213   0.0902   47-69   Type I dockerin domain  
2034655912   0.000961   30-58   Type I dockerin domain  
2034667590   0.0392   3-20   Type I dockerin domain  
2034670474   0.000562   66-91   Type I dockerin domain  
2034682604   0.00183   22-48   Type I dockerin domain  
2034693289   0.0804   3-16   Type I dockerin domain  
2034693954   0.0222   75-102   Type I dockerin domain  
2034694822   0.00719   34-64   Type I dockerin domain  
2034712335   0.00916   51-72   Type I dockerin domain  
2034719375   0.0392   75-95   Type I dockerin domain  
2034733101   0.00597   43-69   Type I dockerin domain  
2034737277   0.00785   93-119   Type I dockerin domain  
2034775639   0.00732   25-45   Type I dockerin domain  
2034813126   0.0942   2-19   Type I dockerin domain  
2034813169   0.018   124-146   Type I dockerin domain  
2034813210   0.0105   99-118   Type I dockerin domain  
2034868099   0.0255   51-106   Type I dockerin domain  
2034877310   0.0902   75-104   Type I dockerin domain  
2034881702   0.0334   106-132   Type I dockerin domain  
2034897711   0.00549   34-56   Type I dockerin domain  
2034900502   0.022   192-235   Type I dockerin domain  
2034907667   0.00183   28-63   Type I dockerin domain  
2034911450   0.0392   29-76   Type I dockerin domain  
2034926670   0.0118   3-20   Type I dockerin domain  
2034937741   0.0123   53-77   Type I dockerin domain  
2034955654   0.0294   21-47   Type I dockerin domain  
2034965493   0.00144   44-76   Type I dockerin domain  
2034967107   0.0068   111-134   Type I dockerin domain  
2034968012   0.00981   90-109   Type I dockerin domain  
2034973748   0.012   78-103   Type I dockerin domain  
2034985207   0.00569   45-68   Type I dockerin domain  
2034992010   0.0804   52-69   Type I dockerin domain  
2034993730   0.000589   86-122   Type I dockerin domain  
2035004580   0.0147   82-105   Type I dockerin domain  
2035017204   0.0275   17-34   Type I dockerin domain  
2035028983   0.00484   81-107   Type I dockerin domain  
2035051718   0.0196   50-73   Type I dockerin domain  
2035055603   0.000981   29-71   Type I dockerin domain  
2035056186   0.00889   64-85   Type I dockerin domain  
2035058623   0.000706   47-81   Type I dockerin domain  
2035062124   0.0353   105-141   Type I dockerin domain  
2035079316   0.0706   96-112   Type I dockerin domain  
2035082518   0.0184   55-72   Type I dockerin domain  
2035085553   0.000863   11-41   Type I dockerin domain  
2035091080   0.0053   70-117   Type I dockerin domain  
2035097475   0.0106   50-75   Type I dockerin domain  

Dump top (Dump top) (meta-genome) has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
2031892586   0.00000235   26-75   Type I dockerin domain  
2032027780   0.000000085   40-91   Type I dockerin domain  
2032084784   0.00000183   19-68   Type I dockerin domain  
2032131716   0.000000114   58-109   Type I dockerin domain  
2032138669   0.000085   2-51   Type I dockerin domain  
2032253702   0.000000128   79-130   Type I dockerin domain  
 
Weak hits:
2031880813   0.0745   4-37   Type I dockerin domain  
2031904243   0.0432   19-54   Type I dockerin domain  
2031905932   0.00265   67-105   Type I dockerin domain  
2031914003   0.0011   21-60   Type I dockerin domain  
2031958303   0.000863   129-182   Type I dockerin domain  
2031999902   0.0341   21-39   Type I dockerin domain  
2032034352   0.0165   105-127   Type I dockerin domain  
2032053546   0.0863   4-20   Type I dockerin domain  
2032056962   0.0589   13-35   Type I dockerin domain  
2032069163   0.00285   31-59   Type I dockerin domain  
2032082090   0.00141   50-72   Type I dockerin domain  
2032091200   0.0222   9-25   Type I dockerin domain  
2032091636   0.0298   91-131   Type I dockerin domain  
2032141330   0.0109   20-46   Type I dockerin domain  
2032148343   0.00628   29-65   Type I dockerin domain  
2032183553   0.00183   61-86   Type I dockerin domain  
2032187719   0.00451   9-29   Type I dockerin domain  
2032197245   0.0628   4-34   Type I dockerin domain  
2032230686   0.000667   12-37   Type I dockerin domain  
2032233407   0.000235   23-56   Type I dockerin domain  
2032249572   0.0159   11-27   Type I dockerin domain  
2032251360   0.000209   44-70   Type I dockerin domain  
2032253014   0.00126   8-40   Type I dockerin domain  
2032253311   0.012   87-109   Type I dockerin domain  
2032260221   0.00226   46-103   Type I dockerin domain  
2032262544   0.017   111-128   Type I dockerin domain  
2032272997   0.0785   14-52   Type I dockerin domain  

Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
2001424910   0.00000379   238-294   Type I dockerin domain  
2001425864   0.00000000569   163-224   Type I dockerin domain  
 
Weak hits:
2001400393   0.0247   285-343   Type I dockerin domain  
2001436711   0.00177   150-196   Type I dockerin domain  

Freshwater propionate enrichment of Brocadia fulgida (meta-genome) has 15 significant domains in 15 proteins.

     

Sequence ID   Evalue   Region   Family  
2031451440   0.00000314   216-264   Type I dockerin domain  
2031451927   0.00000000288   4-58   Type I dockerin domain  
2031452923   0.000000562   44-89   Type I dockerin domain  
2031472293   0.00001   35-81   Type I dockerin domain  
2031479934   0.0000000144   25-77   Type I dockerin domain  
2031481557   0.0000054   87-132   Type I dockerin domain  
2031484614   0.000000981   140-186   Type I dockerin domain  
2031487089   0.00000209   86-131   Type I dockerin domain  
2031489575   0.0000000108   6-51   Type I dockerin domain  
2031491942   0.0000000103   1-43   Type I dockerin domain  
2031496012   0.0000461   96-143   Type I dockerin domain  
2031502184   0.000000000785   30-83   Type I dockerin domain  
2031502564   0.000000116   141-187   Type I dockerin domain  
2031504983   0.0000484   2-53   Type I dockerin domain  
2031508033   0.0000222   215-261   Type I dockerin domain  
 
Weak hits:
2031436382   0.0353   164-189   Type I dockerin domain  
2031445997   0.000405   182-230   Type I dockerin domain  
2031447842   0.0361   12-36   Type I dockerin domain  
2031449538   0.000216   130-176   Type I dockerin domain  
2031453825   0.000275   60-105   Type I dockerin domain  
2031455003   0.000209   28-75   Type I dockerin domain  
2031460538   0.000327   3-42   Type I dockerin domain  
2031461742   0.000165   115-164   Type I dockerin domain  
2031468484   0.0144   9-50   Type I dockerin domain  
2031490425   0.00017   142-167   Type I dockerin domain  
2031492480   0.000337   112-168   Type I dockerin domain  
2031493046   0.000245   20-81   Type I dockerin domain  
2031497400   0.0186   30-56   Type I dockerin domain  
2031497739   0.000902   2-21   Type I dockerin domain  

Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
2030683697   0.00000837   2-29   Type I dockerin domain  
2030766860   0.00000000314   27-82   Type I dockerin domain  
 
Weak hits:
2030772597   0.00922   7-25   Type I dockerin domain  
2030802492   0.00288   10-31   Type I dockerin domain  
2030810171   0.0589   50-71   Type I dockerin domain  
2030866473   0.0301   75-119   Type I dockerin domain  

Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
2013888127   0.000000497   14-77   Type I dockerin domain  
2013894885   0.00000245   321-378   Type I dockerin domain  
2013895161   0.0000746   784-833   Type I dockerin domain  
2013898286   0.000000471   1827-1878   Type I dockerin domain  
2013901022   0.00000000903   108-161   Type I dockerin domain  
2013901861   0.000000262   104-166   Type I dockerin domain  
2013903246   0.000000968   311-366   Type I dockerin domain  
2013905259   0.0000000412   22-71   Type I dockerin domain  
 
Weak hits:
2013898630   0.02   151-179   Type I dockerin domain  
2013919645   0.00549   8-40   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
2004248179   0.0000000445   98-156   Type I dockerin domain  
2004257699   0.000000549   25-76   Type I dockerin domain  
2004258312   0.0000000245   9-63   Type I dockerin domain  
 
Weak hits:
2004247202   0.00432   24-84   Type I dockerin domain  
2004250815   0.0471   158-181   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
2004261889   0.0000288   119-168   Type I dockerin domain  
2004263486   0.000000746   155-205   Type I dockerin domain  
2004265286   0.00000798   100-155   Type I dockerin domain  
2004267097   0.00000000419   40-92   Type I dockerin domain  
2004268721   0.0000000275   102-156   Type I dockerin domain  
 
Weak hits:
2004262456   0.0177   94-137   Type I dockerin domain  
2004266324   0.0114   135-162   Type I dockerin domain  
2004268657   0.00798   94-114   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
2004275152   0.0000000569   85-137   Type I dockerin domain  
2004276535   0.000000647   68-118   Type I dockerin domain  
2004279423   0.0000000114   73-125   Type I dockerin domain  
2004280871   0.000000301   3-53   Type I dockerin domain  
2004281517   0.0000392   124-180   Type I dockerin domain  
2004284068   0.00000216   172-224   Type I dockerin domain  
 
Weak hits:
2004273172   0.000334   113-173   Type I dockerin domain  
2004277953   0.00131   55-79   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
2004286659   0.000000523   191-239   Type I dockerin domain  
2004293713   0.0000000155   158-213   Type I dockerin domain  
2004294105   0.00000321   170-209   Type I dockerin domain  
2004294589   0.000000971   169-222   Type I dockerin domain  
  0.000275   122-163   Type I dockerin domain  
2004296019   0.0000000101   170-222   Type I dockerin domain  
2004296131   0.00000181   51-102   Type I dockerin domain  
2004296418   0.000000196   109-160   Type I dockerin domain  
 
Weak hits:
2004289910   0.00458   109-156   Type I dockerin domain  
2004294231   0.0129   48-78   Type I dockerin domain  
2004298099   0.011   5-59   Type I dockerin domain  
2004298460   0.0922   103-119   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
2004299624   0.000000000824   88-140   Type I dockerin domain  
2004299995   0.000000000000569   23-79   Type I dockerin domain  
2004300790   0.0000615   31-84   Type I dockerin domain  
2004301584   0.0000255   220-271   Type I dockerin domain  
2004304800   0.0000000471   94-146   Type I dockerin domain  
2004307501   0.00000608   25-81   Type I dockerin domain  
2004308122   0.0000000667   20-68   Type I dockerin domain  
2004313200   0.00000157   39-99   Type I dockerin domain  
2004313238   0.00000863   168-233   Type I dockerin domain  
2004313239   0.0000029   66-131   Type I dockerin domain  
2004313278   0.000000000994   123-181   Type I dockerin domain  
 
Weak hits:
2004304342   0.000542   100-153   Type I dockerin domain  
2004305252   0.0129   53-84   Type I dockerin domain  
  0.1   116-143   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
2004316957   0.00000157   54-106   Type I dockerin domain  
2004318302   0.0000000693   78-141   Type I dockerin domain  
 
Weak hits:
2004315746   0.000288   2-34   Type I dockerin domain  
2004318461   0.00034   58-107   Type I dockerin domain  
2004318825   0.000392   103-153   Type I dockerin domain  
2004319479   0.00206   138-192   Type I dockerin domain  
2004322770   0.000144   78-160   Type I dockerin domain  
2004326114   0.00209   232-281   Type I dockerin domain  
2004328352   0.0031   17-48   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) has 15 significant domains in 15 proteins.

     

Sequence ID   Evalue   Region   Family  
2004330716   0.0000000432   186-236   Type I dockerin domain  
2004333187   0.0000126   134-193   Type I dockerin domain  
2004333863   0.000000412   114-181   Type I dockerin domain  
2004333963   0.000000471   38-91   Type I dockerin domain  
2004334257   0.00000889   218-271   Type I dockerin domain  
2004338182   0.0000471   24-68   Type I dockerin domain  
2004340139   0.00000000549   100-151   Type I dockerin domain  
2004340141   0.000000128   150-201   Type I dockerin domain  
2004340694   0.00000235   133-192   Type I dockerin domain  
2004340696   0.000000051   37-97   Type I dockerin domain  
2004341019   0.00000000471   149-211   Type I dockerin domain  
2004341522   0.0000000405   180-230   Type I dockerin domain  
2004343296   0.0000000667   191-250   Type I dockerin domain  
2004344350   0.0000000327   53-106   Type I dockerin domain  
2004344351   0.0000000366   63-116   Type I dockerin domain  
 
Weak hits:
2004330659   0.0373   10-46   Type I dockerin domain  
2004332621   0.000441   165-210   Type I dockerin domain  
2004333511   0.0167   29-78   Type I dockerin domain  
2004336911   0.0785   7-52   Type I dockerin domain  
2004344725   0.00255   61-103   Type I dockerin domain  
2004344896   0.00133   22-62   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
2004346899   0.00000288   92-143   Type I dockerin domain  
2004348249   0.0000422   70-125   Type I dockerin domain  
2004352708   0.0000000051   131-183   Type I dockerin domain  
  0.00126   88-148   Type I dockerin domain  
2004355203   0.0000186   219-267   Type I dockerin domain  
2004355777   0.00000000366   2-55   Type I dockerin domain  
2004356147   0.000000177   30-86   Type I dockerin domain  
2004356240   0.000051   52-108   Type I dockerin domain  
2004358258   0.0000000327   2-46   Type I dockerin domain  
 
Weak hits:
2004346154   0.000133   126-170   Type I dockerin domain  
2004348076   0.000314   61-113   Type I dockerin domain  
2004352291   0.000216   30-81   Type I dockerin domain  
2004352992   0.000942   53-115   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
2004358997   0.00000137   43-102   Type I dockerin domain  
2004359389   0.0000255   113-160   Type I dockerin domain  
  0.00147   81-128   Type I dockerin domain  
2004360053   0.000000677   32-94   Type I dockerin domain  
2004360306   0.0000216   202-260   Type I dockerin domain  
2004363239   0.000000608   26-85   Type I dockerin domain  
2004367352   0.000000000706   44-101   Type I dockerin domain  
2004370764   0.0000000068   127-184   Type I dockerin domain  
 
Weak hits:
2004359498   0.0942   219-244   Type I dockerin domain  
2004360179   0.00183   216-242   Type I dockerin domain  
2004360180   0.00183   215-241   Type I dockerin domain  
2004360826   0.000765   158-201   Type I dockerin domain  
2004363389   0.0129   28-54   Type I dockerin domain  
2004364509   0.000304   185-238   Type I dockerin domain  
2004365643   0.0049   94-116   Type I dockerin domain  
2004369084   0.000141   200-263   Type I dockerin domain  
2004369649   0.000419   201-243   Type I dockerin domain  

Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
2004372349   0.00000765   86-147   Type I dockerin domain  
2004373483   0.00000054   49-109   Type I dockerin domain  
2004374061   0.0000157   2-48   Type I dockerin domain  
2004374905   0.0000706   149-200   Type I dockerin domain  
2004377064   0.0000294   83-142   Type I dockerin domain  
2004377859   0.0000239   32-87   Type I dockerin domain  
2004377920   0.0000000181   27-91   Type I dockerin domain  
2004380758   0.0000000118   113-165   Type I dockerin domain  
2004381905   0.00000000301   131-188   Type I dockerin domain  
2004381960   0.00000275   109-162   Type I dockerin domain  
2004382909   0.0000000471   112-169   Type I dockerin domain  
  0.00301   180-223   Type I dockerin domain  
 
Weak hits:
2004374294   0.0432   6-55   Type I dockerin domain  
2004375896   0.0824   147-173   Type I dockerin domain  
2004383149   0.000706   182-239   Type I dockerin domain  
2004383216   0.000432   103-148   Type I dockerin domain  

Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
2004154328   0.0000314   20-68   Type I dockerin domain  
2004159827   0.00000000123   69-118   Type I dockerin domain  
 
Weak hits:
2004105460   0.0902   11-55   Type I dockerin domain  
2004115010   0.00432   121-151   Type I dockerin domain  
2004115157   0.00275   17-44   Type I dockerin domain  
2004153661   0.000262   111-151   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) has 58 significant domains in 58 proteins.

     

Sequence ID   Evalue   Region   Family  
2015256327   0.0000471   392-438   Type I dockerin domain  
2015257297   0.00000687   154-201   Type I dockerin domain  
2015257721   0.0000051   72-123   Type I dockerin domain  
2015259636   0.000000314   298-353   Type I dockerin domain  
2015259971   0.000034   144-190   Type I dockerin domain  
2015260754   0.0000216   132-179   Type I dockerin domain  
2015261666   0.0000294   276-322   Type I dockerin domain  
2015262451   0.0000922   227-274   Type I dockerin domain  
2015262616   0.000017   2-46   Type I dockerin domain  
2015262619   0.00000484   160-233   Type I dockerin domain  
2015263011   0.00000228   164-212   Type I dockerin domain  
2015263629   0.0000222   244-290   Type I dockerin domain  
2015263774   0.0000968   442-489   Type I dockerin domain  
2015264269   0.00000000000301   15-70   Type I dockerin domain  
2015264382   0.000053   69-113   Type I dockerin domain  
2015264384   0.000011   377-425   Type I dockerin domain  
2015266224   0.00000497   211-260   Type I dockerin domain  
2015267030   0.0000000693   75-131   Type I dockerin domain  
2015267184   0.0000641   379-426   Type I dockerin domain  
2015268998   0.000000249   154-202   Type I dockerin domain  
2015269468   0.00000314   170-220   Type I dockerin domain  
2015271732   0.000049   42-91   Type I dockerin domain  
2015271816   0.00000147   9-57   Type I dockerin domain  
2015273516   0.0000000129   148-205   Type I dockerin domain  
2015274533   0.00000157   92-140   Type I dockerin domain  
2015275099   0.0000235   94-140   Type I dockerin domain  
2015276679   0.0000124   130-176   Type I dockerin domain  
2015277022   0.0000209   64-112   Type I dockerin domain  
2015277517   0.0000883   56-104   Type I dockerin domain  
2015278813   0.00000137   81-129   Type I dockerin domain  
2015280646   0.00000051   54-102   Type I dockerin domain  
2015281120   0.000000902   107-155   Type I dockerin domain  
2015285818   0.0000000484   23-78   Type I dockerin domain  
2015286494   0.0000137   189-235   Type I dockerin domain  
2015286496   0.00000628   38-85   Type I dockerin domain  
2015288245   0.0000226   97-146   Type I dockerin domain  
2015291731   0.0000216   64-110   Type I dockerin domain  
2015297571   0.00000275   110-160   Type I dockerin domain  
2015298763   0.000051   144-191   Type I dockerin domain  
2015300456   0.00000334   140-189   Type I dockerin domain  
2015300492   0.00000628   31-78   Type I dockerin domain  
2015300863   0.00000116   72-119   Type I dockerin domain  
2015302420   0.000000000497   114-169   Type I dockerin domain  
2015302637   0.000000772   122-169   Type I dockerin domain  
2015308295   0.000034   8-30   Type I dockerin domain  
2015312023   0.0000000726   3-49   Type I dockerin domain  
2015314220   0.0000196   119-167   Type I dockerin domain  
2015314291   0.0000275   68-116   Type I dockerin domain  
2015315597   0.00000000484   15-71   Type I dockerin domain  
2015316308   0.00000294   161-211   Type I dockerin domain  
2015316979   0.0000000706   100-165   Type I dockerin domain  
2015318063   0.000000000235   132-188   Type I dockerin domain  
2015321094   0.00000054   104-151   Type I dockerin domain  
2015324081   0.0000654   3-41   Type I dockerin domain  
2015327961   0.0000000144   81-134   Type I dockerin domain  
2015328830   0.0000000000157   5-63   Type I dockerin domain  
2015331337   0.0000000209   11-67   Type I dockerin domain  
2015332040   0.00000000116   110-178   Type I dockerin domain  
 
Weak hits:
2015256205   0.0106   13-36   Type I dockerin domain  
2015256620   0.0844   265-287   Type I dockerin domain  
2015257571   0.000765   47-93   Type I dockerin domain  
2015258117   0.018   363-410   Type I dockerin domain  
2015258832   0.000124   137-185   Type I dockerin domain  
2015259929   0.000693   70-119   Type I dockerin domain  
2015260298   0.00135   40-90   Type I dockerin domain  
2015260739   0.00131   8-34   Type I dockerin domain  
2015260821   0.000249   3-46   Type I dockerin domain  
2015262193   0.0133   17-48   Type I dockerin domain  
2015263421   0.000392   241-287   Type I dockerin domain  
2015267137   0.000484   10-35   Type I dockerin domain  
2015269925   0.00654   67-86   Type I dockerin domain  
2015271968   0.000373   15-38   Type I dockerin domain  
2015272428   0.00068   376-400   Type I dockerin domain  
2015273113   0.00392   17-42   Type I dockerin domain  
2015274356   0.000161   364-411   Type I dockerin domain  
2015274729   0.00798   56-78   Type I dockerin domain  
2015275109   0.00102   339-384   Type I dockerin domain  
2015276105   0.00133   209-258   Type I dockerin domain  
2015279450   0.000129   151-199   Type I dockerin domain  
2015279508   0.0249   243-262   Type I dockerin domain  
2015281124   0.00155   11-34   Type I dockerin domain  
2015282233   0.000144   160-193   Type I dockerin domain  
2015283264   0.000249   166-212   Type I dockerin domain  
2015283366   0.000353   19-46   Type I dockerin domain  
2015287626   0.00144   21-46   Type I dockerin domain  
2015288247   0.00981   9-33   Type I dockerin domain  
2015294684   0.000216   147-195   Type I dockerin domain  
2015295404   0.000262   128-173   Type I dockerin domain  
2015300729   0.00628   12-42   Type I dockerin domain  
2015304406   0.000745   136-182   Type I dockerin domain  
2015305871   0.000366   136-183   Type I dockerin domain  
2015307193   0.0314   50-67   Type I dockerin domain  
2015307403   0.000183   226-259   Type I dockerin domain  
2015309758   0.000615   207-245   Type I dockerin domain  
2015311298   0.000804   198-243   Type I dockerin domain  
2015314104   0.00345   44-83   Type I dockerin domain  
2015315253   0.00249   134-158   Type I dockerin domain  
2015317529   0.000159   38-88   Type I dockerin domain  
2015321957   0.000314   25-66   Type I dockerin domain  
2015322315   0.001   114-163   Type I dockerin domain  
2015324984   0.00106   215-253   Type I dockerin domain  
2015325492   0.00608   56-102   Type I dockerin domain  
2015327020   0.00863   148-193   Type I dockerin domain  
2015327498   0.000785   6-45   Type I dockerin domain  
2015330852   0.00157   1-50   Type I dockerin domain  
2015331828   0.00116   41-87   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) has 33 significant domains in 33 proteins.

     

Sequence ID   Evalue   Region   Family  
2016874130   0.000000222   35-88   Type I dockerin domain  
2016876621   0.000000589   87-133   Type I dockerin domain  
2016879306   0.0000000314   92-140   Type I dockerin domain  
2016879310   0.000000366   191-239   Type I dockerin domain  
2016883278   0.000000051   6-60   Type I dockerin domain  
2016883419   0.0000000304   192-246   Type I dockerin domain  
2016883452   0.00000196   142-187   Type I dockerin domain  
2016883755   0.00000785   201-249   Type I dockerin domain  
2016883800   0.0000000615   40-94   Type I dockerin domain  
2016884604   0.0000916   31-81   Type I dockerin domain  
2016892519   0.00000366   61-110   Type I dockerin domain  
2016895212   0.0000106   189-235   Type I dockerin domain  
2016896597   0.0000647   90-139   Type I dockerin domain  
2016897908   0.0000126   12-60   Type I dockerin domain  
2016898951   0.000051   291-342   Type I dockerin domain  
2016903097   0.00000598   43-93   Type I dockerin domain  
2016903203   0.0000000412   79-129   Type I dockerin domain  
2016905199   0.0000379   261-318   Type I dockerin domain  
2016907041   0.0000602   9-67   Type I dockerin domain  
2016907934   0.00000288   195-255   Type I dockerin domain  
2016910606   0.0000275   285-335   Type I dockerin domain  
2016910660   0.0000902   37-87   Type I dockerin domain  
2016913127   0.0000955   58-106   Type I dockerin domain  
2016913146   0.0000131   135-188   Type I dockerin domain  
2016916415   0.0000169   80-133   Type I dockerin domain  
2016917263   0.0000216   228-274   Type I dockerin domain  
2016917941   0.00000114   96-147   Type I dockerin domain  
2016922073   0.00000883   148-194   Type I dockerin domain  
2016923827   0.0000667   172-219   Type I dockerin domain  
2016923933   0.0000549   145-194   Type I dockerin domain  
2016925450   0.0000000102   55-106   Type I dockerin domain  
2016926047   0.0000667   280-327   Type I dockerin domain  
2016926605   0.00000536   226-273   Type I dockerin domain  
 
Weak hits:
2016873443   0.000235   246-295   Type I dockerin domain  
2016879864   0.00106   11-31   Type I dockerin domain  
2016886800   0.000104   81-130   Type I dockerin domain  
2016894047   0.00255   9-43   Type I dockerin domain  
2016895014   0.000119   490-537   Type I dockerin domain  
2016895769   0.000549   411-458   Type I dockerin domain  
2016899617   0.00212   150-197   Type I dockerin domain  
2016902731   0.00373   61-86   Type I dockerin domain  
2016904932   0.00122   60-108   Type I dockerin domain  
2016905116   0.000128   45-95   Type I dockerin domain  
2016908298   0.000118   87-137   Type I dockerin domain  
2016911103   0.00811   168-187   Type I dockerin domain  
2016915785   0.00051   225-271   Type I dockerin domain  
2016918522   0.00294   46-72   Type I dockerin domain  
2016918606   0.000222   153-200   Type I dockerin domain  
2016923301   0.000196   344-390   Type I dockerin domain  
2016926011   0.000392   239-287   Type I dockerin domain  
2016926158   0.00327   91-110   Type I dockerin domain  
2016926538   0.00196   2-45   Type I dockerin domain  
2016926782   0.000412   128-176   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) has 9 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
2016992324   0.00000000902   98-151   Type I dockerin domain  
2017003560   0.000000536   112-162   Type I dockerin domain  
2017005115   0.00000000334   20-73   Type I dockerin domain  
2017009410   0.0000000186   46-94   Type I dockerin domain  
2017016335   0.00000589   38-102   Type I dockerin domain  
2017017382   0.0000000000017   7-66   Type I dockerin domain  
2017020884   0.00000000222   58-113   Type I dockerin domain  
2017022918   0.00000000942   178-234   Type I dockerin domain  
2017027297   0.000000392   2-61   Type I dockerin domain  
 
Weak hits:
2017006806   0.000128   29-55   Type I dockerin domain  
2017017342   0.000697   192-238   Type I dockerin domain  
2017028768   0.000314   65-109   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) has 12 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
2016929183   0.000000000115   231-290   Type I dockerin domain  
2016943305   0.0000000000144   196-252   Type I dockerin domain  
2016950312   0.0000000353   18-67   Type I dockerin domain  
2016952405   0.000000108   40-94   Type I dockerin domain  
2016958965   0.0000000000353   425-481   Type I dockerin domain  
2016969381   0.00000000576   163-232   Type I dockerin domain  
2016969741   0.0000000772   147-196   Type I dockerin domain  
2016970261   0.00000481   259-303   Type I dockerin domain  
2016970632   0.00000889   191-240   Type I dockerin domain  
2016976700   0.00000108   66-128   Type I dockerin domain  
2016977051   0.000000366   17-65   Type I dockerin domain  
2016980806   0.00000109   208-259   Type I dockerin domain  
 
Weak hits:
2016933750   0.000118   1-63   Type I dockerin domain  
2016941352   0.00432   10-33   Type I dockerin domain  
2016959300   0.00235   40-83   Type I dockerin domain  
2016976319   0.000657   11-39   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) has 12 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
2017032522   0.000051   273-324   Type I dockerin domain  
2017033063   0.0000128   282-329   Type I dockerin domain  
2017033600   0.000000893   77-135   Type I dockerin domain  
2017047876   0.000000012   6-57   Type I dockerin domain  
2017056863   0.0000000034   20-69   Type I dockerin domain  
2017062308   0.0000922   120-171   Type I dockerin domain  
2017062696   0.00000183   9-47   Type I dockerin domain  
2017062907   0.00000746   31-85   Type I dockerin domain  
2017064888   0.0000108   112-167   Type I dockerin domain  
2017077077   0.0000402   63-114   Type I dockerin domain  
2017079406   0.0000000353   76-132   Type I dockerin domain  
2017079437   0.000000654   19-66   Type I dockerin domain  
 
Weak hits:
2017037479   0.00863   48-91   Type I dockerin domain  
2017041280   0.00285   186-241   Type I dockerin domain  
2017044179   0.00053   5-35   Type I dockerin domain  
2017045545   0.00294   22-52   Type I dockerin domain  
2017052033   0.000942   105-136   Type I dockerin domain  
2017052949   0.0549   77-101   Type I dockerin domain  
2017060718   0.000523   170-218   Type I dockerin domain  
  0.00105   115-169   Type I dockerin domain  
  0.00471   224-270   Type I dockerin domain  
2017065629   0.000196   468-513   Type I dockerin domain  
2017065762   0.00235   4-59   Type I dockerin domain  
2017065959   0.00108   93-142   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) has 20 significant domains in 20 proteins.

     

Sequence ID   Evalue   Region   Family  
2013954233   0.0000000161   27-82   Type I dockerin domain  
2013960268   0.00000628   166-213   Type I dockerin domain  
2013965849   0.00000000811   23-73   Type I dockerin domain  
2013968914   0.00000124   39-93   Type I dockerin domain  
2013969079   0.000000301   13-70   Type I dockerin domain  
2013970043   0.000000726   80-127   Type I dockerin domain  
2013974995   0.00000000157   3-60   Type I dockerin domain  
2013975012   0.000000366   147-202   Type I dockerin domain  
2013981480   0.00000196   105-155   Type I dockerin domain  
2013987052   0.000000243   72-124   Type I dockerin domain  
2013991351   0.00000000131   100-155   Type I dockerin domain  
2013992284   0.00000765   6-64   Type I dockerin domain  
2013993483   0.000000726   152-216   Type I dockerin domain  
2013993760   0.00000549   8-38   Type I dockerin domain  
2013994118   0.0000157   28-86   Type I dockerin domain  
2013998060   0.00000157   152-208   Type I dockerin domain  
2013998287   0.000000000216   65-123   Type I dockerin domain  
2014002653   0.000000824   2-51   Type I dockerin domain  
2014002858   0.0000000981   20-73   Type I dockerin domain  
2014003456   0.000000122   77-134   Type I dockerin domain  
 
Weak hits:
2013959218   0.00018   284-343   Type I dockerin domain  
2013963844   0.000102   105-186   Type I dockerin domain  
2013976261   0.00445   1-54   Type I dockerin domain  
2013981688   0.0102   113-172   Type I dockerin domain  
2013983386   0.0106   18-46   Type I dockerin domain  
2013997128   0.000353   195-225   Type I dockerin domain  
2014003070   0.00337   4-24   Type I dockerin domain  

Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
2013527523   0.0000000068   10-67   Type I dockerin domain  
2013529278   0.0000183   219-276   Type I dockerin domain  
2013534079   0.000000222   1-52   Type I dockerin domain  
2013535138   0.0000598   50-112   Type I dockerin domain  
2013537583   0.00000000834   83-142   Type I dockerin domain  
2013549335   0.000000157   3-53   Type I dockerin domain  
2013550469   0.0000353   57-106   Type I dockerin domain  
2013554968   0.00000445   189-246   Type I dockerin domain  
2013555558   0.0000000451   70-118   Type I dockerin domain  
2013555798   0.0000392   165-213   Type I dockerin domain  
2013559879   0.0000000854   103-156   Type I dockerin domain  
  0.0628   139-193   Type I dockerin domain  
2013560912   0.0000000275   50-104   Type I dockerin domain  
2013569824   0.0000051   65-113   Type I dockerin domain  
 
Weak hits:
2013530731   0.0239   162-193   Type I dockerin domain  
2013531679   0.000255   57-105   Type I dockerin domain  
2013532007   0.000392   151-206   Type I dockerin domain  
2013535427   0.00667   52-83   Type I dockerin domain  
2013550302   0.051   184-207   Type I dockerin domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   31323 31323
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   3 2
No Yes Acholeplasma laidlawii PG-8A   1 1
No Yes Gloeobacter violaceus PCC 7421   6 6
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium clariflavum DSM 19732   81 79
No Yes Clostridium cellulolyticum H10   62 62
No Yes Clostridium thermocellum ATCC 27405   73 71
No Yes Ruminococcus bromii   27 26
No Yes Ruminococcus albus 7   60 60
No Yes Desulfotomaculum acetoxidans DSM 771   10 10
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   5 5
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   72 72
No Yes Clostridium perfringens ATCC 13124   4 4
No Yes Clostridium cellulovorans 743B   45 44
No Yes Clostridium acetobutylicum ATCC 824   10 10
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Paenibacillus sp. JDR-2   8 8
No Yes Paenibacillus mucilaginosus 3016   9 9
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Oceanobacillus iheyensis HTE831   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   2 2
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   7 7
No Yes Haliscomenobacter hydrossis DSM 1100   18 18
No Yes Salinibacter ruber M8   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   7 7
No Yes Rhodopirellula baltica SH 1   18 18
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Caldisericum exile AZM16c01   2 2
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfatibacillum alkenivorans AK-01   18 18
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Geobacter daltonii FRC-32   4 4
No Yes Geobacter uraniireducens Rf4   7 7
No Yes Geobacter sulfurreducens KN400   4 4
No Yes Geobacter metallireducens GS-15   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Methanocella conradii HZ254   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   3 3
No Yes Methanosaeta concilii GP6   8 8
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   3 3
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosphaerula palustris E1-9c   36 36
No Yes Methanospirillum hungatei JF-1   4 4
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   8 8
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   2 2
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrialba magadii ATCC 43099   2 2
No Yes Halogeometricum borinquense DSM 11551   2 2
No Yes Haloferax mediterranei ATCC 33500   2 2
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   3 3
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   4 4
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanotorris igneus Kol 5   2 2
No Yes methanocaldococcus infernus ME   3 3
No Yes Methanothermococcus okinawensis IH1   4 4
No Yes Methanococcus aeolicus Nankai-3   3 3
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   1 1
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Cyanothece sp. PCC 7822   3 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   7 7
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Clostridium thermocellum DSM 1313   78 76
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Ruminococcus champanellensis 18P13   63 62
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   8 8
No Yes Clostridium perfringens str. 13   3 3
No Yes Clostridium acetobutylicum DSM 1731   10 10
No Yes Clostridium acetobutylicum EA 2018   10 10
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus mucilaginosus KNP414   9 9
No Yes Paenibacillus mucilaginosus K02   8 8
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Singulisphaera acidiphila DSM 18658   3 3
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Geobacter sulfurreducens PCA   4 4
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   4 4
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   3 3
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   9 9
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Halorhabdus tiamatea SARL4B   7 7
No Yes Haloarcula hispanica N601   2 2
No Yes Methanococcus maripaludis X1   2 2
No Yes Acholeplasma laidlawii PG-8A (duplicate)   1 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   135 134
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   97 97
No Yes 4_Deep_abyss (meta-genome)   8 8
No Yes 5_050719P (meta-genome)   142 142
No Yes 5_Below_upper_mesopelagic (meta-genome)   3 3
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   12 12
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   15 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   11 11
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   58 58
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   33 33
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   13 13
No Yes Human Gut Community Subject 8 (meta-genome)   18 18
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   55 55
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   7 7
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   75 75
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   29 29
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   25 25
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   6 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   8 8
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   10 10
No Yes NCBI 2017_08 genome   11161 11071
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   29 29
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   13 13
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   36 36
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   70 70
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   16 16
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   24 24
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   349 346
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   30 30
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   15933 15737
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   35 35
No Yes Global Ocean Sampling Expedition (GOS)   766 765
No Yes NCBI plasmid sequences (Plasmids)   22 22
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   47 47
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   69 69
No Yes TargetDB (Targets)   46 44

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