SUPERFAMILY 1.75 HMM library and genome assignments server

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Type I dockerin domain superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 200 significant domains in 197 proteins.

Showing genomes 126 to 150 of 295
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Dactylococcopsis salina PCC 8305 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|428780314|ref|YP_007172100.1|   0.000017   659-716   Type I dockerin domain  
gi|428781002|ref|YP_007172788.1|   0.00000811   316-365   Type I dockerin domain  
 
Weak hits:
gi|428780411|ref|YP_007172197.1|   0.000324   3286-3345   Type I dockerin domain  
gi|428780971|ref|YP_007172757.1|   0.0654   1623-1682   Type I dockerin domain  
gi|428781001|ref|YP_007172787.1|   0.00149   3097-3148   Type I dockerin domain  

Synechococcus sp. JA-2-3B'a(2-13) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|86608532|ref|YP_477294.1|   0.00000000137   32-92   Type I dockerin domain  

Synechococcus sp. JA-3-3Ab has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|86606851|ref|YP_475614.1|   0.00000000667   32-91   Type I dockerin domain  

Cyanothece sp. PCC 7822 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|307591317|ref|YP_003900116.1|   0.00000196   4848-4899   Type I dockerin domain  
gi|307592220|ref|YP_003899811.1|   0.000000106   6698-6751   Type I dockerin domain  
gi|307592357|ref|YP_003899948.1|   0.0000000432   600-653   Type I dockerin domain  
 
Weak hits:
gi|307150511|ref|YP_003885895.1|   0.00161   1436-1480   Type I dockerin domain  
gi|307154892|ref|YP_003890276.1|   0.00262   1655-1706   Type I dockerin domain  
gi|307591413|ref|YP_003900212.1|   0.00216   1320-1372   Type I dockerin domain  

Gloeobacter kilaueensis Gloeobacter sp. JS has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|554635019|ref|YP_008710663.1|   0.000000000235   22-79   Type I dockerin domain  
gi|554635702|ref|YP_008711346.1|   0.00000000000412   25-82   Type I dockerin domain  
gi|554635703|ref|YP_008711347.1|   0.000000000000916   20-80   Type I dockerin domain  
gi|554635704|ref|YP_008711348.1|   0.000000000262   22-81   Type I dockerin domain  
gi|554636400|ref|YP_008712044.1|   0.0000000000157   30-86   Type I dockerin domain  
gi|554636445|ref|YP_008712089.1|   0.00000000235   31-87   Type I dockerin domain  
gi|554637525|ref|YP_008713169.1|   0.00000000445   25-81   Type I dockerin domain  

Stanieria cyanosphaera PCC 7437 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|434399850|ref|YP_007133854.1|   0.0000196   755-819   Type I dockerin domain  

Anabaena cylindrica PCC 7122 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|440685193|ref|YP_007159987.1|   0.00000144   7170-7220   Type I dockerin domain  
 
Weak hits:
gi|440684105|ref|YP_007158900.1|   0.00589   129-164   Type I dockerin domain  
gi|440684467|ref|YP_007159262.1|   0.00876   107-152   Type I dockerin domain  

Deinococcus peraridilitoris DSM 19664 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|429221121|ref|YP_007182765.1|   0.00000259   132-179   Type I dockerin domain  

Erysipelothrix rhusiopathiae SY1027 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|509152546|ref|YP_008072787.1|   0.000000000000114   533-594   Type I dockerin domain  

Clostridium thermocellum DSM 1313 has 78 significant domains in 76 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|385777517|ref|YP_005686682.1|   9.71e-19   252-323   Type I dockerin domain  
gi|385777558|ref|YP_005686723.1|   4.51e-18   571-638   Type I dockerin domain  
gi|385777725|ref|YP_005686890.1|   6.87e-17   895-961   Type I dockerin domain  
gi|385777726|ref|YP_005686891.1|   1.47e-20   636-706   Type I dockerin domain  
gi|385777775|ref|YP_005686940.1|   4.12e-21   520-590   Type I dockerin domain  
gi|385777776|ref|YP_005686941.1|   2.26e-18   545-611   Type I dockerin domain  
gi|385777788|ref|YP_005686953.1|   3.79e-18   497-564   Type I dockerin domain  
gi|385777795|ref|YP_005686960.1|   4.32e-18   35-101   Type I dockerin domain  
gi|385777875|ref|YP_005687040.1|   1.37e-17   500-567   Type I dockerin domain  
gi|385777876|ref|YP_005687041.1|   5.98e-19   356-425   Type I dockerin domain  
gi|385777892|ref|YP_005687057.1|   4.45e-19   391-457   Type I dockerin domain  
gi|385777893|ref|YP_005687058.1|   1.44e-17   393-455   Type I dockerin domain  
gi|385777931|ref|YP_005687096.1|   4.41e-21   561-629   Type I dockerin domain  
gi|385777993|ref|YP_005687158.1|   0.000000000101   1293-1349   Type I dockerin domain  
gi|385778051|ref|YP_005687216.1|   8.44e-21   345-410   Type I dockerin domain  
gi|385778054|ref|YP_005687219.1|   0.0000000000000693   535-604   Type I dockerin domain  
  0.000000000000392   464-524   Type I dockerin domain  
gi|385778058|ref|YP_005687223.1|   1.47e-18   403-474   Type I dockerin domain  
gi|385778204|ref|YP_005687369.1|   7.55e-20   346-414   Type I dockerin domain  
gi|385778206|ref|YP_005687371.1|   7.46e-19   774-840   Type I dockerin domain  
gi|385778341|ref|YP_005687506.1|   9.68e-19   613-678   Type I dockerin domain  
gi|385778649|ref|YP_005687814.1|   0.0000000000000755   1947-2010   Type I dockerin domain  
gi|385778654|ref|YP_005687819.1|   5e-18   729-797   Type I dockerin domain  
gi|385778745|ref|YP_005687910.1|   1.77e-18   580-648   Type I dockerin domain  
gi|385778747|ref|YP_005687912.1|   7.26e-17   482-551   Type I dockerin domain  
gi|385778772|ref|YP_005687937.1|   6.38e-16   467-527   Type I dockerin domain  
gi|385778773|ref|YP_005687938.1|   7.65e-19   410-481   Type I dockerin domain  
gi|385778825|ref|YP_005687990.1|   4.84e-18   663-728   Type I dockerin domain  
gi|385778842|ref|YP_005688007.1|   1.7e-20   31-98   Type I dockerin domain  
gi|385778910|ref|YP_005688075.1|   3.73e-16   505-566   Type I dockerin domain  
gi|385778911|ref|YP_005688076.1|   3.43e-17   750-812   Type I dockerin domain  
gi|385778934|ref|YP_005688099.1|   2.75e-20   511-580   Type I dockerin domain  
gi|385778950|ref|YP_005688115.1|   2.75e-18   640-710   Type I dockerin domain  
gi|385778951|ref|YP_005688116.1|   1.44e-18   1288-1352   Type I dockerin domain  
gi|385779002|ref|YP_005688167.1|   5.4e-17   663-734   Type I dockerin domain  
gi|385779037|ref|YP_005688202.1|   1.18e-16   666-738   Type I dockerin domain  
gi|385779044|ref|YP_005688209.1|   8.14e-20   497-562   Type I dockerin domain  
gi|385779125|ref|YP_005688290.1|   0.00000000657   68-127   Type I dockerin domain  
gi|385779128|ref|YP_005688293.1|   6.97e-17   94-163   Type I dockerin domain  
gi|385779130|ref|YP_005688295.1|   5.3e-19   721-788   Type I dockerin domain  
gi|385779150|ref|YP_005688315.1|   1.24e-19   1164-1229   Type I dockerin domain  
gi|385779151|ref|YP_005688316.1|   7.19e-20   829-894   Type I dockerin domain  
gi|385779158|ref|YP_005688323.1|   0.00000000000000177   462-524   Type I dockerin domain  
gi|385779288|ref|YP_005688453.1|   1.57e-16   480-554   Type I dockerin domain  
gi|385779292|ref|YP_005688457.1|   4.22e-19   415-483   Type I dockerin domain  
gi|385779293|ref|YP_005688458.1|   7.98e-22   411-477   Type I dockerin domain  
gi|385779304|ref|YP_005688469.1|   1.37e-18   35-103   Type I dockerin domain  
gi|385779316|ref|YP_005688481.1|   3.04e-17   29-99   Type I dockerin domain  
gi|385779323|ref|YP_005688488.1|   1.44e-18   981-1049   Type I dockerin domain  
gi|385779352|ref|YP_005688517.1|   3.04e-17   269-332   Type I dockerin domain  
gi|385779369|ref|YP_005688534.1|   1.57e-17   126-194   Type I dockerin domain  
gi|385779370|ref|YP_005688535.1|   1.83e-19   146-214   Type I dockerin domain  
gi|385779449|ref|YP_005688614.1|   0.0000107   51-90   Type I dockerin domain  
gi|385779514|ref|YP_005688679.1|   5.49e-16   469-531   Type I dockerin domain  
gi|385779515|ref|YP_005688680.1|   1.09e-17   676-741   Type I dockerin domain  
gi|385779528|ref|YP_005688693.1|   3.63e-20   521-589   Type I dockerin domain  
gi|385779539|ref|YP_005688704.1|   6.67e-19   174-242   Type I dockerin domain  
gi|385779553|ref|YP_005688718.1|   5.79e-16   827-899   Type I dockerin domain  
gi|385779778|ref|YP_005688943.1|   0.00000000144   2244-2296   Type I dockerin domain  
gi|385779820|ref|YP_005688985.1|   8.93e-17   554-617   Type I dockerin domain  
gi|385779854|ref|YP_005689019.1|   2.06e-19   27-94   Type I dockerin domain  
gi|385779921|ref|YP_005689086.1|   1.67e-16   428-492   Type I dockerin domain  
gi|385779966|ref|YP_005689131.1|   0.00000000000000131   739-806   Type I dockerin domain  
gi|385780017|ref|YP_005689182.1|   2.09e-19   677-743   Type I dockerin domain  
gi|385780061|ref|YP_005689226.1|   2.26e-18   739-808   Type I dockerin domain  
gi|385780062|ref|YP_005689227.1|   4.97e-18   509-576   Type I dockerin domain  
gi|385780063|ref|YP_005689228.1|   2.06e-18   914-982   Type I dockerin domain  
gi|385780071|ref|YP_005689236.1|   2.45e-17   586-656   Type I dockerin domain  
gi|385780109|ref|YP_005689274.1|   2.75e-19   387-457   Type I dockerin domain  
gi|385780122|ref|YP_005689287.1|   4.84e-16   884-946   Type I dockerin domain  
gi|385780123|ref|YP_005689288.1|   0.00000000000000157   665-726   Type I dockerin domain  
gi|385780124|ref|YP_005689289.1|   2.06e-18   438-502   Type I dockerin domain  
gi|385780125|ref|YP_005689290.1|   5.4e-16   903-964   Type I dockerin domain  
gi|385780126|ref|YP_005689291.1|   1.47e-17   467-532   Type I dockerin domain  
gi|385780127|ref|YP_005689292.1|   1.57e-16   951-1013   Type I dockerin domain  
gi|385780210|ref|YP_005689375.1|   3.04e-16   106-175   Type I dockerin domain  
  0.0000000000000144   34-103   Type I dockerin domain  
gi|385780287|ref|YP_005689452.1|   3.34e-18   879-946   Type I dockerin domain  

[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|472466688|ref|YP_007679367.1|   0.0000108   371-428   Type I dockerin domain  

Ruminococcus champanellensis 18P13 has 63 significant domains in 62 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|479199285|ref|YP_007828303.1|   0.00000000755   277-337   Type I dockerin domain  
gi|479199286|ref|YP_007828304.1|   0.00000000000108   924-978   Type I dockerin domain  
gi|479199290|ref|YP_007828308.1|   0.00000000000167   38-97   Type I dockerin domain  
gi|479199298|ref|YP_007828316.1|   0.000000562   1283-1344   Type I dockerin domain  
gi|479199381|ref|YP_007828399.1|   0.0000000000732   772-838   Type I dockerin domain  
gi|479199512|ref|YP_007828530.1|   0.000000000000755   792-857   Type I dockerin domain  
gi|479199513|ref|YP_007828531.1|   0.00000000000432   558-624   Type I dockerin domain  
gi|479199569|ref|YP_007828587.1|   0.000000000824   566-629   Type I dockerin domain  
gi|479199649|ref|YP_007828667.1|   0.0000000017   254-308   Type I dockerin domain  
gi|479199742|ref|YP_007828760.1|   0.0000000000118   754-808   Type I dockerin domain  
gi|479199764|ref|YP_007828782.1|   0.00000000000373   43-104   Type I dockerin domain  
gi|479199772|ref|YP_007828790.1|   0.0000000000000889   730-793   Type I dockerin domain  
gi|479199798|ref|YP_007828816.1|   0.000000000000929   687-755   Type I dockerin domain  
gi|479199837|ref|YP_007828855.1|   8.63e-16   497-563   Type I dockerin domain  
gi|479199857|ref|YP_007828875.1|   0.000000000157   858-912   Type I dockerin domain  
gi|479199900|ref|YP_007828918.1|   0.00000000000255   205-271   Type I dockerin domain  
gi|479199929|ref|YP_007828947.1|   0.0000000000285   418-472   Type I dockerin domain  
gi|479199998|ref|YP_007829016.1|   0.0000000000353   416-472   Type I dockerin domain  
gi|479200037|ref|YP_007829055.1|   0.000000000245   808-873   Type I dockerin domain  
gi|479200038|ref|YP_007829056.1|   0.00000000471   2754-2818   Type I dockerin domain  
  0.00000118   43-108   Type I dockerin domain  
gi|479200045|ref|YP_007829063.1|   0.000000000814   837-892   Type I dockerin domain  
gi|479200090|ref|YP_007829108.1|   0.0000000000245   693-748   Type I dockerin domain  
gi|479200093|ref|YP_007829111.1|   0.00000000000288   662-721   Type I dockerin domain  
gi|479200193|ref|YP_007829211.1|   0.000000000012   1018-1073   Type I dockerin domain  
gi|479200206|ref|YP_007829224.1|   0.00000000000157   718-773   Type I dockerin domain  
gi|479200208|ref|YP_007829226.1|   0.00000000000589   620-674   Type I dockerin domain  
gi|479200214|ref|YP_007829232.1|   0.00000000000366   499-558   Type I dockerin domain  
gi|479200215|ref|YP_007829233.1|   0.000000000549   811-866   Type I dockerin domain  
gi|479200221|ref|YP_007829239.1|   0.00000000000144   727-793   Type I dockerin domain  
gi|479200232|ref|YP_007829250.1|   0.0000000000746   832-889   Type I dockerin domain  
gi|479200286|ref|YP_007829304.1|   0.000000000216   690-744   Type I dockerin domain  
gi|479200306|ref|YP_007829324.1|   0.000000000118   733-798   Type I dockerin domain  
gi|479200313|ref|YP_007829331.1|   0.0000000000294   831-895   Type I dockerin domain  
gi|479200349|ref|YP_007829367.1|   0.0000000000775   380-436   Type I dockerin domain  
gi|479200464|ref|YP_007829482.1|   0.000000000775   30-86   Type I dockerin domain  
gi|479200504|ref|YP_007829522.1|   0.000000000275   684-742   Type I dockerin domain  
gi|479200505|ref|YP_007829523.1|   0.0000000000602   961-1018   Type I dockerin domain  
gi|479200507|ref|YP_007829525.1|   0.00000000068   794-849   Type I dockerin domain  
gi|479200513|ref|YP_007829531.1|   0.000000000275   39-95   Type I dockerin domain  
gi|479200544|ref|YP_007829562.1|   0.000000000746   523-590   Type I dockerin domain  
gi|479200545|ref|YP_007829563.1|   0.0000000000343   541-607   Type I dockerin domain  
gi|479200611|ref|YP_007829629.1|   0.00000000000373   659-715   Type I dockerin domain  
gi|479200637|ref|YP_007829655.1|   0.000000392   184-248   Type I dockerin domain  
gi|479200641|ref|YP_007829659.1|   0.0000000000912   838-893   Type I dockerin domain  
gi|479200658|ref|YP_007829676.1|   0.000000000363   700-758   Type I dockerin domain  
gi|479200672|ref|YP_007829690.1|   0.000000000000196   722-788   Type I dockerin domain  
gi|479200673|ref|YP_007829691.1|   0.000000000255   677-732   Type I dockerin domain  
gi|479200674|ref|YP_007829692.1|   0.000000000667   891-954   Type I dockerin domain  
gi|479200706|ref|YP_007829724.1|   0.00000000000903   203-267   Type I dockerin domain  
gi|479200707|ref|YP_007829725.1|   0.00000000000324   40-103   Type I dockerin domain  
gi|479200893|ref|YP_007829911.1|   0.000000687   608-673   Type I dockerin domain  
gi|479200916|ref|YP_007829934.1|   0.0000000000118   443-499   Type I dockerin domain  
gi|479200969|ref|YP_007829987.1|   0.00000000000785   555-622   Type I dockerin domain  
gi|479201072|ref|YP_007830090.1|   0.00000000772   950-1006   Type I dockerin domain  
gi|479201098|ref|YP_007830116.1|   0.00000000765   285-344   Type I dockerin domain  
gi|479201136|ref|YP_007830154.1|   0.0000000000647   543-607   Type I dockerin domain  
gi|479201170|ref|YP_007830188.1|   0.00000000314   566-632   Type I dockerin domain  
gi|479201194|ref|YP_007830212.1|   0.000000184   469-525   Type I dockerin domain  
gi|479201295|ref|YP_007830313.1|   0.0000000000432   421-480   Type I dockerin domain  
gi|479201296|ref|YP_007830314.1|   0.000000112   220-279   Type I dockerin domain  
gi|479201379|ref|YP_007830397.1|   0.0000000000562   677-731   Type I dockerin domain  
gi|479201384|ref|YP_007830402.1|   0.00000216   624-683   Type I dockerin domain  
 
Weak hits:
gi|479199762|ref|YP_007828780.1|   0.00051   37-86   Type I dockerin domain  
gi|479199796|ref|YP_007828814.1|   0.000602   30-74   Type I dockerin domain  
gi|479201120|ref|YP_007830138.1|   0.00196   81-125   Type I dockerin domain  

Clostridium difficile BI1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|384362015|ref|YP_006199867.1|   0.0000000144   179-231   Type I dockerin domain  

Clostridium difficile R20291 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|260688031|ref|YP_003219165.1|   0.0000000144   179-231   Type I dockerin domain  

Clostridium difficile CD196 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|260684372|ref|YP_003215657.1|   0.0000000144   179-231   Type I dockerin domain  

Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|479338485|ref|YP_007849703.1|   0.00000000144   806-868   Type I dockerin domain  

Candidatus Arthromitus sp. SFB-rat-Yit has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|347542300|ref|YP_004856936.1|   0.00000000876   31-79   Type I dockerin domain  

Candidatus Arthromitus sp. SFB-mouse-Yit has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|384455629|ref|YP_005668224.1|   0.0000000785   31-80   Type I dockerin domain  

Clostridium saccharoperbutylacetonicum N1-4(HMT) has 8 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|451818679|ref|YP_007454880.1|   0.000000000000301   790-845   Type I dockerin domain  
gi|451818681|ref|YP_007454882.1|   0.0000000000000589   682-739   Type I dockerin domain  
gi|451818682|ref|YP_007454883.1|   0.00000000000034   813-870   Type I dockerin domain  
gi|451818684|ref|YP_007454885.1|   0.00000000000000876   656-711   Type I dockerin domain  
gi|451818685|ref|YP_007454886.1|   0.00000000000000275   551-606   Type I dockerin domain  
gi|451818686|ref|YP_007454887.1|   0.000000000000314   413-471   Type I dockerin domain  
gi|451818691|ref|YP_007454892.1|   0.0000000000000255   435-492   Type I dockerin domain  
gi|451818692|ref|YP_007454893.1|   0.000000000000889   321-378   Type I dockerin domain  
 
Weak hits:
gi|451822622|ref|YP_007458822.1|   0.00549   701-759   Type I dockerin domain  

Clostridium perfringens str. 13 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|18309173|ref|NP_561107.1|   0.0000144   1577-1627   Type I dockerin domain  
gi|18310028|ref|NP_561962.1|   0.0000000144   1103-1163   Type I dockerin domain  
gi|18310248|ref|NP_562182.1|   0.0000000327   1302-1354   Type I dockerin domain  
 
Weak hits:
gi|18310857|ref|NP_562791.1|   0.00183   1429-1477   Type I dockerin domain  

Clostridium acetobutylicum DSM 1731 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|337735778|ref|YP_004635225.1|   1.67e-18   809-875   Type I dockerin domain  
gi|337736128|ref|YP_004635575.1|   0.0000000000000755   667-724   Type I dockerin domain  
gi|337736129|ref|YP_004635576.1|   0.00000000000000647   422-479   Type I dockerin domain  
gi|337736130|ref|YP_004635577.1|   0.00000000000000602   652-708   Type I dockerin domain  
gi|337736132|ref|YP_004635579.1|   0.00000000000000549   549-604   Type I dockerin domain  
gi|337736133|ref|YP_004635580.1|   0.00000000000000432   632-690   Type I dockerin domain  
gi|337736134|ref|YP_004635581.1|   0.000000000000562   477-534   Type I dockerin domain  
gi|337736135|ref|YP_004635582.1|   9.03e-16   367-423   Type I dockerin domain  
gi|337736136|ref|YP_004635583.1|   1.03e-16   771-835   Type I dockerin domain  
gi|337738674|ref|YP_004638121.1|   0.000000000000196   954-1009   Type I dockerin domain  

Clostridium acetobutylicum EA 2018 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|384457289|ref|YP_005669709.1|   1.67e-18   809-875   Type I dockerin domain  
gi|384457637|ref|YP_005670057.1|   0.0000000000000755   667-724   Type I dockerin domain  
gi|384457638|ref|YP_005670058.1|   0.00000000000000647   422-479   Type I dockerin domain  
gi|384457639|ref|YP_005670059.1|   0.00000000000000602   652-708   Type I dockerin domain  
gi|384457641|ref|YP_005670061.1|   0.00000000000000549   549-604   Type I dockerin domain  
gi|384457642|ref|YP_005670062.1|   0.00000000000000432   632-690   Type I dockerin domain  
gi|384457643|ref|YP_005670063.1|   0.000000000000562   477-534   Type I dockerin domain  
gi|384457644|ref|YP_005670064.1|   9.03e-16   367-423   Type I dockerin domain  
gi|384457645|ref|YP_005670065.1|   1.03e-16   771-835   Type I dockerin domain  
gi|384460185|ref|YP_005672605.1|   0.000000000000196   954-1009   Type I dockerin domain  

Thermoanaerobacterium saccharolyticum JW/SL-YS485 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|390933276|ref|YP_006390781.1|   0.000000249   263-318   Type I dockerin domain  

Enterococcus faecalis OG1RF has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|384513495|ref|YP_005708588.1|   0.000000000732   1140-1207   Type I dockerin domain  

Enterococcus faecalis V583 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|29376367|ref|NP_815521.1|   0.000000000732   1131-1198   Type I dockerin domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   31323 31323
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   5 5
No Yes Monosiga brevicollis   3 2
No Yes Acholeplasma laidlawii PG-8A   1 1
No Yes Gloeobacter violaceus PCC 7421   6 6
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Eggerthella lenta DSM 2243   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Clostridium clariflavum DSM 19732   81 79
No Yes Clostridium cellulolyticum H10   62 62
No Yes Clostridium thermocellum ATCC 27405   73 71
No Yes Ruminococcus bromii   27 26
No Yes Ruminococcus albus 7   60 60
No Yes Desulfotomaculum acetoxidans DSM 771   10 10
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   5 5
No Yes Clostridium difficile 630   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Roseburia hominis A2-183   1 1
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   72 72
No Yes Clostridium perfringens ATCC 13124   4 4
No Yes Clostridium cellulovorans 743B   45 44
No Yes Clostridium acetobutylicum ATCC 824   10 10
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Paenibacillus sp. JDR-2   8 8
No Yes Paenibacillus mucilaginosus 3016   9 9
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Oceanobacillus iheyensis HTE831   2 2
No Yes Bacillus thuringiensis str. Al Hakam   2 2
No Yes Bacillus cereus 03BB102   2 2
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Melioribacter roseus P3M   1 1
No Yes Ignavibacterium album JCM 16511   7 7
No Yes Haliscomenobacter hydrossis DSM 1100   18 18
No Yes Salinibacter ruber M8   1 1
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   7 7
No Yes Rhodopirellula baltica SH 1   18 18
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Opitutus terrae PB90-1   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Caldisericum exile AZM16c01   2 2
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfatibacillum alkenivorans AK-01   18 18
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Geobacter daltonii FRC-32   4 4
No Yes Geobacter uraniireducens Rf4   7 7
No Yes Geobacter sulfurreducens KN400   4 4
No Yes Geobacter metallireducens GS-15   1 1
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Methylomicrobium alcaliphilum   1 1
No Yes Methylomonas methanica MC09   2 2
No Yes Methanocella conradii HZ254   1 1
No Yes Methanosaeta harundinacea 6Ac   1 1
No Yes Methanosaeta thermophila PT   3 3
No Yes Methanosaeta concilii GP6   8 8
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   3 3
No Yes Methanosarcina mazei Go1   1 1
No Yes Methanosphaerula palustris E1-9c   36 36
No Yes Methanospirillum hungatei JF-1   4 4
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   8 8
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermoplasmatales archaeon BRNA1   2 2
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrialba magadii ATCC 43099   2 2
No Yes Halogeometricum borinquense DSM 11551   2 2
No Yes Haloferax mediterranei ATCC 33500   2 2
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   3 3
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   4 4
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanotorris igneus Kol 5   2 2
No Yes methanocaldococcus infernus ME   3 3
No Yes Methanothermococcus okinawensis IH1   4 4
No Yes Methanococcus aeolicus Nankai-3   3 3
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   1 1
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Cyanothece sp. PCC 7822   3 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   7 7
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Clostridium thermocellum DSM 1313   78 76
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Ruminococcus champanellensis 18P13   63 62
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   8 8
No Yes Clostridium perfringens str. 13   3 3
No Yes Clostridium acetobutylicum DSM 1731   10 10
No Yes Clostridium acetobutylicum EA 2018   10 10
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Thermobacillus composti KWC4   1 1
No Yes Paenibacillus mucilaginosus KNP414   9 9
No Yes Paenibacillus mucilaginosus K02   8 8
No Yes Bacillus toyonensis BCT-7112   2 2
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   2 2
No Yes Bacillus cereus biovar anthracis str. CI   2 2
No Yes Bacillus cereus AH187   1 1
No Yes Bacillus cereus B4264   1 1
No Yes Bacillus cereus Q1   1 1
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   1 1
No Yes Bacillus cereus E33L   1 1
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Rhodothermus marinus SG0.5JP17-172   2 2
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Singulisphaera acidiphila DSM 18658   3 3
No Yes Desulfocapsa sulfexigens DSM 10523   1 1
No Yes Geobacter sulfurreducens PCA   4 4
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Sulfuricella denitrificans skB26   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Methanosarcina mazei Tuc01   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   4 4
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Candidatus Methanomethylophilus alvus Mx1201   3 3
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   9 9
No Yes Natronobacterium gregoryi SP2   1 1
No Yes Halorhabdus tiamatea SARL4B   7 7
No Yes Haloarcula hispanica N601   2 2
No Yes Methanococcus maripaludis X1   2 2
No Yes Acholeplasma laidlawii PG-8A (duplicate)   1 1
No Yes 1_050719N (meta-genome)   2 2
No Yes 1_Upper_euphotic (meta-genome)   2 2
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   135 134
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   97 97
No Yes 4_Deep_abyss (meta-genome)   8 8
No Yes 5_050719P (meta-genome)   142 142
No Yes 5_Below_upper_mesopelagic (meta-genome)   3 3
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   12 12
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   3 3
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   15 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   11 11
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   11 11
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   58 58
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   33 33
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   20 20
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 7 (meta-genome)   13 13
No Yes Human Gut Community Subject 8 (meta-genome)   18 18
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   55 55
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   7 7
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   75 75
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   29 29
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   16 16
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   25 25
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   6 6
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   8 8
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   10 10
No Yes NCBI 2017_08 genome   11161 11071
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   29 29
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   13 13
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   36 36
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   70 70
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   16 16
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   7 7
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   24 24
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   349 346
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   30 30
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   15933 15737
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   35 35
No Yes Global Ocean Sampling Expedition (GOS)   766 765
No Yes NCBI plasmid sequences (Plasmids)   22 22
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   47 47
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   69 69
No Yes TargetDB (Targets)   46 44

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