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  Home > Genomes > BAG domain domains in all eukaryotic genomes


BAG domain superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 201 significant domains in 116 proteins.

Showing genomes 1 to 25 of 510
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Homo sapiens 76_38 has 19 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000287322   2.09e-29   355-455   BAG domain  
ENSP00000299204   2.16e-28   1-90   BAG domain  
  5.1e-26   359-446   BAG domain  
  3.92e-19   156-261   BAG domain  
  0.000000000000373   269-349   BAG domain  
ENSP00000338814   2.2e-29   38-131   BAG domain  
  4.58e-26   395-487   BAG domain  
  4.71e-19   197-302   BAG domain  
  0.000000000000432   310-390   BAG domain  
ENSP00000358081   1.44e-27   400-499   BAG domain  
ENSP00000369026   7.98e-54   96-230   BAG domain  
ENSP00000391713   2.16e-28   1-90   BAG domain  
  5.1e-26   359-446   BAG domain  
  3.92e-19   156-261   BAG domain  
  0.000000000000373   269-349   BAG domain  
ENSP00000393298   1.83e-29   319-419   BAG domain  
ENSP00000419092   0.0000000000000152   102-150   BAG domain  
ENSP00000420514   2.22e-53   211-345   BAG domain  
ENSP00000450497   5.3e-29   1-90   BAG domain  
 
Weak hits:
ENSP00000259632   0.0604   5-70   BAG domain  
ENSP00000330200   0.0011   287-330   BAG domain  
ENSP00000332247   0.0377   83-127   BAG domain  
ENSP00000343986   0.0534   5-70   BAG domain  
ENSP00000368191   0.0439   5-70   BAG domain  
ENSP00000368193   0.0322   5-70   BAG domain  
ENSP00000368196   0.0416   5-70   BAG domain  
ENSP00000432915   0.0534   5-70   BAG domain  
ENSP00000464295   0.0377   33-65   BAG domain  
ENSP00000476634   0.0196   169-223   BAG domain  
ENSP00000482236   0.0118   83-127   BAG domain  

Pan troglodytes 76_2.1.4 has 11 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000005287   1.44e-27   400-499   BAG domain  
ENSPTRP00000011531   1.57e-29   38-131   BAG domain  
  3.66e-26   400-487   BAG domain  
  4.71e-19   197-302   BAG domain  
  0.000000000000432   310-390   BAG domain  
ENSPTRP00000011532   1.32e-28   1-90   BAG domain  
  3.53e-26   359-446   BAG domain  
  3.92e-19   156-261   BAG domain  
  0.000000000000373   269-349   BAG domain  
ENSPTRP00000034529   2.09e-29   355-455   BAG domain  
ENSPTRP00000035663   1.15e-53   108-242   BAG domain  
 
Weak hits:
ENSPTRP00000009530   0.0377   83-127   BAG domain  
ENSPTRP00000035721   0.0604   5-70   BAG domain  
ENSPTRP00000047773   0.0228   247-280   BAG domain  

Gorilla gorilla 76_3.1 has 11 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000000921   2.09e-29   355-455   BAG domain  
ENSGGOP00000001762   1.57e-29   37-130   BAG domain  
  3.14e-26   394-486   BAG domain  
  4.71e-19   196-301   BAG domain  
  0.000000000000412   309-389   BAG domain  
ENSGGOP00000011213   1.31e-27   397-496   BAG domain  
ENSGGOP00000016131   6.41e-52   217-351   BAG domain  
ENSGGOP00000022510   1.32e-28   1-90   BAG domain  
  3.53e-26   359-446   BAG domain  
  3.92e-19   156-261   BAG domain  
  0.000000000000373   269-349   BAG domain  
 
Weak hits:
ENSGGOP00000002868   0.0604   5-70   BAG domain  
ENSGGOP00000008746   0.033   83-127   BAG domain  
ENSGGOP00000017087   0.000863   288-331   BAG domain  

Pongo abelii 76_2 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000003157   1.44e-27   399-498   BAG domain  
ENSPPYP00000007014   1.32e-28   1-90   BAG domain  
  3.14e-26   359-446   BAG domain  
  3.92e-19   156-261   BAG domain  
  0.000000000000451   269-349   BAG domain  
ENSPPYP00000020762   2.88e-29   440-540   BAG domain  
ENSPPYP00000021443   6.67e-53   211-345   BAG domain  
 
Weak hits:
ENSPPYP00000005803   0.0377   83-127   BAG domain  
ENSPPYP00000011694   0.0746   141-224   BAG domain  
ENSPPYP00000012684   0.0596   41-108   BAG domain  
ENSPPYP00000018060   0.00494   285-334   BAG domain  

Nomascus leucogenys 76_1.0 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000006298   1.09e-53   194-328   BAG domain  
ENSNLEP00000014877   2.09e-29   354-454   BAG domain  
ENSNLEP00000019643   1.55e-29   37-130   BAG domain  
  7.33e-27   385-486   BAG domain  
  4.71e-19   196-301   BAG domain  
  0.00000000000051   309-389   BAG domain  
ENSNLEP00000020325   1.44e-27   399-498   BAG domain  
 
Weak hits:
ENSNLEP00000002439   0.0377   83-127   BAG domain  
ENSNLEP00000005904   0.0604   5-70   BAG domain  
ENSNLEP00000019218   0.0863   6-92   BAG domain  

Papio anubis 76 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000003479   1.44e-26   355-450   BAG domain  
ENSPANP00000013293   1.46e-29   20-113   BAG domain  
  2.75e-26   382-469   BAG domain  
  4.51e-19   179-284   BAG domain  
  0.000000000000726   292-372   BAG domain  
ENSPANP00000016515   1.44e-27   401-499   BAG domain  
ENSPANP00000019152   2.35e-53   212-346   BAG domain  
 
Weak hits:
ENSPANP00000004583   0.0471   86-160   BAG domain  
ENSPANP00000007381   0.0188   406-469   BAG domain  
ENSPANP00000008366   0.0604   84-127   BAG domain  
ENSPANP00000019134   0.0706   5-70   BAG domain  
ENSPANP00000020319   0.0361   276-316   BAG domain  

Macaca mulatta 76_1 has 11 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000001088   1.44e-27   401-499   BAG domain  
ENSMMUP00000018113   2.49e-29   355-455   BAG domain  
ENSMMUP00000022372   1.49e-29   39-132   BAG domain  
  3.79e-26   401-488   BAG domain  
  4.71e-19   198-303   BAG domain  
  0.000000000000785   311-391   BAG domain  
ENSMMUP00000022373   1.49e-29   38-131   BAG domain  
  3.14e-26   395-487   BAG domain  
  4.71e-19   197-302   BAG domain  
  0.000000000000765   310-390   BAG domain  
ENSMMUP00000039354   2.35e-53   211-345   BAG domain  
 
Weak hits:
ENSMMUP00000008617   0.0581   20-62   BAG domain  
ENSMMUP00000009695   0.0549   86-160   BAG domain  
ENSMMUP00000011161   0.0526   253-299   BAG domain  
ENSMMUP00000011163   0.0487   252-299   BAG domain  
ENSMMUP00000011164   0.0416   252-299   BAG domain  
ENSMMUP00000013824   0.0267   202-237   BAG domain  
ENSMMUP00000027353   0.0455   5-70   BAG domain  
ENSMMUP00000027356   0.0581   5-70   BAG domain  
ENSMMUP00000027357   0.0149   5-70   BAG domain  

Callithrix jacchus 76_3.2.1 has 9 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000004755   1.57e-29   319-419   BAG domain  
ENSCJAP00000004763   1.83e-29   355-455   BAG domain  
ENSCJAP00000014938   9.16e-53   220-354   BAG domain  
ENSCJAP00000031469   1.29e-28   1-90   BAG domain  
  3.79e-26   354-446   BAG domain  
  7.85e-20   156-261   BAG domain  
  0.000000000000451   269-349   BAG domain  
ENSCJAP00000037872   3.4e-27   401-499   BAG domain  
ENSCJAP00000042157   2.88e-27   341-439   BAG domain  
 
Weak hits:
ENSCJAP00000016063   0.0298   5-70   BAG domain  
ENSCJAP00000020851   0.0157   279-319   BAG domain  
ENSCJAP00000034975   0.0133   292-335   BAG domain  
ENSCJAP00000038113   0.0251   83-127   BAG domain  
ENSCJAP00000044656   0.00196   116-181   BAG domain  
ENSCJAP00000049179   0.0235   236-299   BAG domain  

Otolemur garnettii 76_3 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000000687   4.32e-50   211-344   BAG domain  
ENSOGAP00000010227   1.44e-26   408-498   BAG domain  
ENSOGAP00000013578   5.36e-29   355-454   BAG domain  
ENSOGAP00000022523   5.97e-29   1-90   BAG domain  
  2.22e-26   359-446   BAG domain  
  6.28e-21   155-261   BAG domain  
  0.000000000000275   269-349   BAG domain  
 
Weak hits:
ENSOGAP00000003405   0.0157   10-43   BAG domain  
ENSOGAP00000007383   0.0432   5-70   BAG domain  
ENSOGAP00000013062   0.0581   237-297   BAG domain  
ENSOGAP00000019002   0.0424   35-103   BAG domain  
ENSOGAP00000021824   0.0314   886-953   BAG domain  

Microcebus murinus 76_1 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000003556   1.18e-29   6-99   BAG domain  
  1.57e-25   369-455   BAG domain  
  1.49e-20   165-270   BAG domain  
  0.00000000000034   278-358   BAG domain  
ENSMICP00000006842   7.2e-27   348-440   BAG domain  
ENSMICP00000011013   1.44e-52   181-314   BAG domain  
ENSMICP00000013401   0.00000000000392   247-310   BAG domain  
 
Weak hits:
ENSMICP00000002170   0.0169   5-70   BAG domain  

Rattus norvegicus 76_5.0 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000011455   7.85e-50   224-357   BAG domain  
ENSRNOP00000015333   9.68e-29   1-90   BAG domain  
  7.72e-25   361-446   BAG domain  
  2.16e-20   156-263   BAG domain  
  0.000000000000051   269-349   BAG domain  
ENSRNOP00000027616   1.7e-27   404-501   BAG domain  
ENSRNOP00000061900   3.79e-25   235-329   BAG domain  
 
Weak hits:
ENSRNOP00000014812   0.029   236-308   BAG domain  
ENSRNOP00000019561   0.0122   5-70   BAG domain  
ENSRNOP00000059964   0.0102   879-942   BAG domain  
ENSRNOP00000064507   0.0706   10-44   BAG domain  

Mus musculus 76_38 has 16 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000030125   4.71e-50   221-355   BAG domain  
ENSMUSP00000033136   3.92e-28   406-504   BAG domain  
ENSMUSP00000044725   4.06e-27   361-455   BAG domain  
ENSMUSP00000051049   2.67e-29   1-90   BAG domain  
  2.62e-26   361-446   BAG domain  
  1.26e-20   156-263   BAG domain  
  0.000000000000732   269-349   BAG domain  
ENSMUSP00000103724   1.31e-50   85-219   BAG domain  
ENSMUSP00000123839   3.73e-20   1-60   BAG domain  
ENSMUSP00000124861   0.00000000785   1-37   BAG domain  
ENSMUSP00000125183   2.67e-29   1-90   BAG domain  
  2.62e-26   361-446   BAG domain  
  1.26e-20   156-263   BAG domain  
  0.000000000000732   269-349   BAG domain  
ENSMUSP00000139864   1.31e-50   85-219   BAG domain  
ENSMUSP00000140923   4.71e-50   221-355   BAG domain  
 
Weak hits:
ENSMUSP00000030158   0.0243   5-70   BAG domain  
ENSMUSP00000035113   0.0706   10-44   BAG domain  
ENSMUSP00000113382   0.0628   4-36   BAG domain  
ENSMUSP00000119095   0.0306   2-63   BAG domain  
ENSMUSP00000130988   0.0165   5-70   BAG domain  

Dipodomys ordii 76_1 has 6 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000005877   0.000000000000288   207-255   BAG domain  
  0.0349   313-341   BAG domain  
ENSDORP00000010705   2.88e-27   354-446   BAG domain  
ENSDORP00000010832   2.88e-27   400-497   BAG domain  
ENSDORP00000014024   7.33e-27   178-267   BAG domain  
  1.31e-16   1-82   BAG domain  
  0.000000000000262   90-170   BAG domain  
 
Weak hits:
ENSDORP00000001602   0.0769   4-70   BAG domain  
ENSDORP00000002862   0.0275   83-127   BAG domain  
ENSDORP00000009489   0.0129   9-43   BAG domain  
ENSDORP00000014123   0.0785   10-44   BAG domain  

Ictidomys tridecemlineatus 76_2 has 6 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000016313   3.01e-53   190-324   BAG domain  
ENSSTOP00000018038   5.49e-27   408-505   BAG domain  
ENSSTOP00000023914   9.58e-29   1-90   BAG domain  
  1.18e-26   347-446   BAG domain  
  2.75e-20   156-261   BAG domain  
  0.00000000000068   269-349   BAG domain  
 
Weak hits:
ENSSTOP00000002511   0.0596   4-70   BAG domain  

Heterocephalus glaber v1.7-2 has 11 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000224112   6.54e-53   113-247   BAG domain  
HGL_H00000287322   3.66e-28   356-453   BAG domain  
HGL_H00000338814-1   2.22e-25   157-242   BAG domain  
  0.000000000000294   65-145   BAG domain  
  0.00000000000127   2-59   BAG domain  
HGL_H00000338814-2   1.88e-29   25-118   BAG domain  
  5.23e-23   347-426   BAG domain  
  1.39e-17   184-289   BAG domain  
HGL_H00000338814-3   3.92e-29   25-118   BAG domain  
  1.83e-25   136-239   BAG domain  
HGL_H00000358081   6.8e-27   513-606   BAG domain  
 
Weak hits:
HGL_H00000259632   0.04   4-70   BAG domain  
HGL_H00000304429   0.0683   271-300   BAG domain  
HGL_H00000332247-1   0.0275   110-154   BAG domain  
HGL_H00000341905   0.0557   869-928   BAG domain  

Cavia porcellus 76_3 has 10 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000003130   6.02e-52   204-338   BAG domain  
ENSCPOP00000006809   2.62e-27   402-500   BAG domain  
ENSCPOP00000011328   1.24e-26   351-443   BAG domain  
ENSCPOP00000014429   1.05e-28   1-90   BAG domain  
  1.06e-25   356-446   BAG domain  
  7.46e-20   156-261   BAG domain  
  0.00000000000216   269-349   BAG domain  
ENSCPOP00000017566   2.62e-16   313-415   BAG domain  
  0.00000000000155   1-72   BAG domain  
  0.0000000000161   139-240   BAG domain  

Oryctolagus cuniculus 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000007725   2.88e-52   198-332   BAG domain  
ENSOCUP00000010054   3.79e-27   410-502   BAG domain  
ENSOCUP00000013235   6.67e-29   357-457   BAG domain  
ENSOCUP00000023837   4.19e-25   59-179   BAG domain  
 
Weak hits:
ENSOCUP00000000317   0.0314   5-70   BAG domain  
ENSOCUP00000002444   0.0235   33-79   BAG domain  
ENSOCUP00000007331   0.0259   276-320   BAG domain  
ENSOCUP00000025083   0.0196   33-78   BAG domain  
ENSOCUP00000025113   0.0589   72-116   BAG domain  

Ochotona princeps 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000000304   0.000000000608   356-419   BAG domain  
ENSOPRP00000015467   3.01e-27   393-488   BAG domain  
 
Weak hits:
ENSOPRP00000005884   0.0573   47-89   BAG domain  
ENSOPRP00000008407   0.0573   5-70   BAG domain  

Tupaia belangeri 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000002672   1.44e-37   191-293   BAG domain  
ENSTBEP00000010275   1.13e-27   402-500   BAG domain  
ENSTBEP00000011558   1.44e-28   266-365   BAG domain  
 
Weak hits:
ENSTBEP00000013273   0.00722   651-727   BAG domain  

Sus scrofa 76_10.2 has 8 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000011385   2.09e-27   404-501   BAG domain  
ENSSSCP00000011729   4.58e-52   188-322   BAG domain  
ENSSSCP00000016763   1.22e-28   266-365   BAG domain  
ENSSSCP00000020845   0.000022   24-91   BAG domain  
ENSSSCP00000026395   2.75e-28   2-90   BAG domain  
  3.53e-17   158-247   BAG domain  
  0.00000000000053   255-334   BAG domain  
  0.00000000000102   345-400   BAG domain  
 
Weak hits:
ENSSSCP00000011701   0.0769   5-70   BAG domain  
ENSSSCP00000024940   0.0275   287-330   BAG domain  

Bos taurus 76_3.1 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000017468   2.49e-28   356-455   BAG domain  
ENSBTAP00000018131   2.35e-27   415-512   BAG domain  
ENSBTAP00000023084   9.03e-29   1-90   BAG domain  
  1.3e-26   349-446   BAG domain  
  2.22e-20   156-261   BAG domain  
  0.000000000000889   269-349   BAG domain  
ENSBTAP00000023720   3.27e-54   103-237   BAG domain  
 
Weak hits:
ENSBTAP00000009563   0.0424   84-127   BAG domain  
ENSBTAP00000015416   0.00408   885-957   BAG domain  
ENSBTAP00000025136   0.0494   4-70   BAG domain  
ENSBTAP00000034157   0.00667   59-130   BAG domain  
ENSBTAP00000043082   0.0675   33-79   BAG domain  
ENSBTAP00000049091   0.0345   33-80   BAG domain  
ENSBTAP00000050787   0.0675   33-79   BAG domain  

Ovis aries 76_3.1 has 8 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000001380   2.09e-28   336-436   BAG domain  
ENSOARP00000003221   2.35e-27   406-503   BAG domain  
ENSOARP00000003222   2.35e-27   406-503   BAG domain  
ENSOARP00000010216   5.36e-54   136-270   BAG domain  
ENSOARP00000014965   8.48e-30   7-100   BAG domain  
  3.53e-26   363-456   BAG domain  
  4.06e-20   166-271   BAG domain  
  0.000000000000687   279-359   BAG domain  
 
Weak hits:
ENSOARP00000002959   0.0534   75-118   BAG domain  
ENSOARP00000003299   0.011   882-951   BAG domain  
ENSOARP00000003301   0.011   891-960   BAG domain  
ENSOARP00000004056   0.062   34-80   BAG domain  
ENSOARP00000007458   0.0267   311-352   BAG domain  
ENSOARP00000009884   0.0263   5-71   BAG domain  
ENSOARP00000014759   0.0573   48-113   BAG domain  
ENSOARP00000015671   0.051   222-281   BAG domain  

Vicugna pacos 76_1 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000000828   8.63e-23   333-423   BAG domain  
ENSVPAP00000007047   2.94e-30   15-108   BAG domain  
  3.66e-18   173-272   BAG domain  
ENSVPAP00000010792   1.23e-28   355-454   BAG domain  
 
Weak hits:
ENSVPAP00000006545   0.0306   46-89   BAG domain  

Tursiops truncatus 76_1 has 7 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000004223   2.88e-27   358-457   BAG domain  
ENSTTRP00000006112   1.24e-29   33-126   BAG domain  
  6.54e-26   395-482   BAG domain  
  1.11e-20   192-298   BAG domain  
  0.000000000000392   305-385   BAG domain  
ENSTTRP00000010024   4.32e-49   146-280   BAG domain  
ENSTTRP00000016046   1.96e-27   403-500   BAG domain  
 
Weak hits:
ENSTTRP00000011338   0.0145   280-320   BAG domain  
ENSTTRP00000015706   0.0126   45-91   BAG domain  

Mustela putorius furo 76_1.0 has 6 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000003026   4.32e-27   422-519   BAG domain  
ENSMPUP00000009783   4.32e-28   355-455   BAG domain  
ENSMPUP00000019040   2.98e-28   1-90   BAG domain  
  1.57e-26   359-446   BAG domain  
  3.73e-20   156-261   BAG domain  
  0.00000000000118   269-349   BAG domain  
 
Weak hits:
ENSMPUP00000001203   0.00259   288-336   BAG domain  
ENSMPUP00000001456   0.0557   84-127   BAG domain  
ENSMPUP00000015291   0.0863   261-301   BAG domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   12734 12734
No Yes Homo sapiens 76_38 Human 19 10
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 11 5
No Yes Gorilla gorilla 76_3.1 Western gorilla 11 5
No Yes Pongo abelii 76_2 Sumatran orangutan 7 4
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 7 4
No Yes Papio anubis 76 Olive baboon 7 4
No Yes Macaca mulatta 76_1 Rhesus monkey 11 5
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 9 6
No Yes Otolemur garnettii 76_3 Small-eared galago 7 4
No Yes Microcebus murinus 76_1 Gray mouse lemur 7 4
No Yes Rattus norvegicus 76_5.0 Norway rat 7 4
No Yes Mus musculus 76_38 House mouse 16 10
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 6 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 6 3
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 11 6
No Yes Cavia porcellus 76_3 Domestic guinea pig 10 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 4 4
No Yes Ochotona princeps 76 American pika 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 3 3
No Yes Sus scrofa 76_10.2 Pig 8 5
No Yes Bos taurus 76_3.1 Cattle 7 4
No Yes Ovis aries 76_3.1 Sheep 8 5
No Yes Vicugna pacos 76_1 Alpaca 4 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 7 4
No Yes Mustela putorius furo 76_1.0 Domestic ferret 6 3
No Yes Ailuropoda melanoleuca 76_1 Giant panda 7 4
No Yes Canis familiaris 76_3.1 Dog 7 4
No Yes Felis catus 76_6.2 Domestic cat 7 4
No Yes Equus caballus 76_2 Horse 7 4
No Yes Myotis lucifugus 76_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 76_1 Large flying fox 7 4
No Yes Sorex araneus 76_1 European shrew 2 2
No Yes Erinaceus europaeus 76 Western European hedgehog 7 4
No Yes Procavia capensis 76_1 Cape rock hyrax 6 3
No Yes Loxodonta africana 76_3 African savanna elephant 7 4
No Yes Echinops telfairi 76 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 12 6
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 3 3
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 7 4
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 8 5
No Yes Ornithorhynchus anatinus 76_5 Platypus 6 3
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 7 4
No Yes Gallus gallus 76_4 Chicken 7 4
No Yes Anas platyrhynchos 76_1.0 Mallard 7 4
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 6 3
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 7 4
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 7 4
No Yes Anolis carolinensis 76_2.0 Green anole 6 3
No Yes Xenopus laevis African clawed frog 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 7 4
No Yes Latimeria chalumnae 76_1 Coelacanth 8 5
No Yes Lepisosteus oculatus 76 Spotted gar 7 4
No Yes Gadus morhua 76_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 5 4
No Yes Takifugu rubripes 76_4 Torafugu 9 6
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 5 3
No Yes Oryzias latipes 76_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 6 4
No Yes Poecilia formosa 76 Amazon molly 7 4
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 8 5
No Yes Astyanax mexicanus 76 Mexican tetra 11 5
No Yes Danio rerio 76_9 Zebrafish 15 6
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   5 5
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   2 2
No Yes Capitella sp. I   3 3
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 7 7
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 4 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   2 2
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 3 3
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   2 2
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   3 3
No Yes Mnemiopsis leidyi Sea walnut 2 2
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 6
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   3 3
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   3 3
No Yes Conidiobolus coronatus NRRL28638 v1.0   2 2
No Yes Mortierella verticillata NRRL 6337   8 8
No Yes Phycomyces blakesleeanus   5 5
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   6 6
No Yes Rhizomucor miehei CAU432   4 4
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   2 2
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   5 5
No Yes Sporobolomyces roseus IAM 13481   2 2
No Yes Microbotryum violaceum 22   4 4
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Piloderma croceum F 1598 v1.0   3 3
No Yes Serpula lacrymans var. lacrymans S7.9   3 3
No Yes Coniophora puteana   2 2
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   2 2
No Yes Pisolithus microcarpus 441 v1.0   2 2
No Yes Pisolithus tinctorius Marx 270 v1.0   2 2
No Yes Scleroderma citrinum Foug A v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Amanita thiersii Skay4041 v1.0   2 2
No Yes Amanita muscaria Koide v1.0 Fly agaric 2 2
No Yes Galerina marginata v1.0   2 2
No Yes Hebeloma cylindrosporum h7 v2.0   2 2
No Yes Laccaria bicolor S238N-H82   3 3
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   5 5
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   3 3
No Yes Fomitiporia mediterranea v1.0   2 2
No Yes Tulasnella calospora AL13/4D v1.0   4 4
No Yes Postia placenta   3 3
No Yes Wolfiporia cocos MD-104 SS10 v1.0   3 3
No Yes Fomitopsis pinicolav1.0   3 3
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   3 3
No Yes Phanerochaete chrysosporium RP-78 2.1   2 2
No Yes Dichomitus squalens   3 3
No Yes Trametes versicolor v1.0   3 3
No Yes Tremella mesenterica Witches' butter 2 2
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   3 3
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Pichia membranifaciensv1.0   1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida tropicalis MYA-3404   1 1
No Yes Candida parapsilosis   1 1
No Yes Candida albicans SC5314   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   1 1
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   2 2
No Yes Schizosaccharomyces japonicus yFS275   2 2
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   3 3
No Yes Dictyostelium discoideum   2 2
No Yes Dictyostelium purpureum   2 2
No Yes Entamoeba dispar 1.2   5 5
No Yes Entamoeba invadens 1.2   2 2
No Yes Entamoeba histolytica 1   2 2
No Yes Selaginella moellendorffii   5 5
No Yes Pinus taeda Loblolly pine 15 15
No Yes Picea abies Norway spruce 5 5
No Yes Eucalyptus grandis v201 Rose gum 13 13
No Yes Theobroma cacao B97-61/B2 v1 Cacao 10 10
No Yes Gossypium raimondii v221   33 33
No Yes Citrus clementina v165   10 10
No Yes Citrus sinensis v154 Sweet orange 8 8
No Yes Thellungiella halophila v173   8 8
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 8 8
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 6 6
No Yes Arabidopsis thaliana 10 Thale cress 8 8
No Yes Carica papaya Papaya 8 8
No Yes Medicago truncatula Barrel medic 12 12
No Yes Phaseolus vulgaris v186 French bean 11 11
No Yes Glycine max v109 Soybean 28 28
No Yes Cucumis sativus v122 Cucumber 16 16
No Yes Fragaria vesca Wild strawberry 8 8
No Yes Malus domestica v196 Apple 20 20
No Yes Prunus persica v139 Peach 8 8
No Yes Linum usitatissimum v200 Flax 16 16
No Yes Manihot esculenta v147 Cassava 13 13
No Yes Populus trichocarpa v156 Black cottonwood 11 11
No Yes Vitis vinifera Wine grape 5 5
No Yes Mimulus guttatus v140 Spotted monkey flower 11 11
No Yes Solanum lycopersicum v.2.3 Tomato 9 9
No Yes Solanum tuberosum Potato 13 13
No Yes Actinidia chinensis Hongyang   18 18
No Yes Aquilegia coerulea v195   7 7
No Yes Triticum urartu 22   5 5
No Yes Triticum aestivum 22 Bread wheat 14 14
No Yes Aegilops tauschii 22   6 6
No Yes Brachypodium distachyon Stiff brome 8 8
No Yes Oryza barthii 22 African wild rice 8 8
No Yes Oryza meridionalis 22   11 11
No Yes Oryza glumaepatula 22   10 10
No Yes Oryza glaberrima African rice 9 9
No Yes Oryza punctata 22   11 11
No Yes Oryza nivara 22   8 8
No Yes Oryza brachyantha 22 Malo sina 7 7
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 10 10
No Yes Oryza sativa v193 Rice 10 10
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 11 11
No Yes Panicum virgatum v202 Switchgrass 19 19
No Yes Setaria italica v164 Foxtail millet 12 12
No Yes Zea mays subsp. mays Maize 19 19
No Yes Zea mays v181 Maize 31 31
No Yes Sorghum bicolor Sorghum 11 10
No Yes Musa balbisiana Balbis banana 17 17
No Yes Musa acuminata 22 Wild Malaysian banana 15 15
No Yes Amborella trichopoda 22   6 6
No Yes Physcomitrella patens   9 9
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlorella vulgaris   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Porphyridium purpureum 02_2012   4 4
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Albugo laibachii 22   2 2
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phytophthora sojae 1.1   3 3
No Yes Phytophthora infestans T30-4   2 2
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Fragilariopsis cylindrus   4 4
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Symbiodinium minutum clade B1 v1.2   2 2
No Yes Naegleria gruberi   2 2
No Yes Guillardia theta CCMP2712 v1.0   2 2
No Yes Candidatus Amoebophilus asiaticus 5a2   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 12 6
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 5 5
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   3 3
No Yes Cryptococcus neoformans JEC21   3 3
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae FL100   2 2
No Yes Saccharomyces cerevisiae CBS7960   2 2
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   2 2
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   2 2
No Yes Batrachochytrium dendrobatidis JAM81   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 9 9
No Yes Hordeum vulgare 22 Domesticated barley 11 11
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 9 9
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 19 10
No Yes Homo sapiens (NCBI version) Human 17 8
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 7 4
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   6 6
No Yes Malus x domestica (Duplicate) Apple 20 20
No Yes Ricinus communis (Early assembly) Castor bean 8 8
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   22 19
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 9 9
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 9 9
No Yes Phoenix dactylifera (Early draft) Date palm 7 6
No Yes Homo sapiens 69_37 Human 7 4
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 7 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 7 4
No Yes Pongo abelii 69_2 Sumatran orangutan 7 4
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 7 4
No Yes Macaca mulatta 69_1 Rhesus monkey 7 4
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 7 4
No Yes Otolemur garnettii 69_3 Small-eared galago 7 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 7 4
No Yes Rattus norvegicus 69_3.4 Norway rat 6 3
No Yes Mus musculus 69_38 House mouse 7 4
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 6 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 6 3
No Yes Cavia porcellus 69_3 Domestic guinea pig 10 5
No Yes Oryctolagus cuniculus 69_2 Rabbit 4 4
No Yes Ochotona princeps 69 American pika 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 3 3
No Yes Sus scrofa 69_10.2 Pig 8 5
No Yes Bos taurus 69_3.1 Cattle 7 4
No Yes Vicugna pacos 69_1 Alpaca 4 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 7 4
No Yes Mustela putorius furo 69_1.0 Domestic ferret 6 3
No Yes Ailuropoda melanoleuca 69_1 Giant panda 7 4
No Yes Canis familiaris 69_3.1 Dog 7 4
No Yes Felis catus 69 Domestic cat 7 4
No Yes Equus caballus 69_2 Horse 7 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 69_1 Large flying fox 7 4
No Yes Sorex araneus 69_1 European shrew 2 2
No Yes Erinaceus europaeus 69 Western European hedgehog 7 4
No Yes Procavia capensis 69_1 Cape rock hyrax 6 3
No Yes Loxodonta africana 69_3 African savanna elephant 7 4
No Yes Echinops telfairi 69 Small Madagascar hedgehog 3 3
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 7 4
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 3 3
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 7 4
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 8 5
No Yes Ornithorhynchus anatinus 69_5 Platypus 6 3
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 7 4
No Yes Gallus gallus 69_2 Chicken 5 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 6 3
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 7 4
No Yes Anolis carolinensis 69_2.0 Green anole 6 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 7 4
No Yes Latimeria chalumnae 69_1 Coelacanth 7 4
No Yes Gadus morhua 69_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 5 4
No Yes Takifugu rubripes 69_4 Torafugu 7 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 5 3
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 6 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 7 4
No Yes Danio rerio 69_9 Zebrafish 7 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   4937 3366
No Yes Protozoadb 2010_08 (Protozoadb)   23 23
No Yes STRING v9.0.5 (STRING)   338 273
No Yes Uniprot 2018_03 genome   4119 3617
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   73 71
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   105 105
No Yes TargetDB (Targets)   8 8
No Yes UniProt viral sequences (Viral)   6 6

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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