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Gtf glycosyltransferase family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 33 significant domains in 33 proteins.

Showing genomes 1 to 25 of 99
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Synechococcus elongatus PCC 7942 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|81300843|ref|YP_401051.1|   1.63e-95   0.0000655   1-404   1iir A:  
 
Weak hits:
gi|81300338|ref|YP_400546.1|   0.00636   0.071   97-262   1iir A:  

Microcoleus sp. PCC 7113 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|428309359|ref|YP_007120336.1|   5.93e-104   0.0000601   1-412   1iir A:  
 
Weak hits:
gi|428313611|ref|YP_007124588.1|   2.58e-80   0.0004   5-421   1iir A:  

Gloeocapsa sp. PCC 7428 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|434391338|ref|YP_007126285.1|   2.36e-105   0.0000655   1-405   1iir A:  
 
Weak hits:
gi|434392076|ref|YP_007127023.1|   0.00000738   0.024   57-124   1iir A:  
gi|434392196|ref|YP_007127143.1|   0.0000000785   0.087   4-135   1rrv A:  
gi|434392197|ref|YP_007127144.1|   0.000146   0.032   58-120   1rrv A:  

Gloeobacter violaceus PCC 7421 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|37522036|ref|NP_925413.1|   8.03e-82   0.0000979   1-402   1iir A:  
 
Weak hits:
gi|37521989|ref|NP_925366.1|   1.5e-102   0.00013   21-437   1rrv A:  
gi|37523280|ref|NP_926657.1|   0.000000029   0.014   2-125   1iir A:  
gi|37523326|ref|NP_926703.1|   8.03e-81   0.001   1-422   1iir A:  
gi|37523385|ref|NP_926762.1|   0.000000000000179   0.06   14-327   1pn3 A:  

Rivularia sp. PCC 7116 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427734865|ref|YP_007054409.1|   1.35e-97   0.0000586   1-415   1iir A:  
gi|427738477|ref|YP_007058021.1|   2.45e-97   0.0001   1-423   1rrv A:  
 
Weak hits:
gi|427738170|ref|YP_007057714.1|   0.00105   0.037   2-125   1iir A:  
gi|427739970|ref|YP_007059514.1|   7.99e-81   0.00035   23-437   1iir A:  

Calothrix sp. PCC 7507 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|427720610|ref|YP_007068604.1|   2.65e-100   0.0000374   1-411   1iir A:  
 
Weak hits:
gi|427717334|ref|YP_007065328.1|   0.00000306   0.021   2-133   1iir A:  

Catenulispora acidiphila DSM 44928 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|256391888|ref|YP_003113452.1|   9.42e-83   0.0000906   1-423   1iir A:  
 
Weak hits:
gi|256389710|ref|YP_003111274.1|   9.65e-33   0.043   10-406   1iir A:  
gi|256392432|ref|YP_003113996.1|   1.72e-74   0.015   1-379   1rrv A:  
gi|256397160|ref|YP_003118724.1|   0.00173   0.049   24-136   1pn3 A:  

Frankia sp. EAN1pec has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|158317558|ref|YP_001510066.1|   8.03e-91   0.00000000163   1-400   1iir A:  
 
Weak hits:
gi|158311938|ref|YP_001504446.1|   1.57e-82   0.00086   1-416   1iir A:  
gi|158316979|ref|YP_001509487.1|   1.01e-74   0.0074   1-394   1rrv A:  
gi|158317318|ref|YP_001509826.1|   1.19e-61   0.019   1-380   1iir A:  

Thermomonospora curvata DSM 43183 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|269126755|ref|YP_003300125.1|   1.13e-85   0.00000000235   1-410   1iir A:  
gi|269128946|ref|YP_003302316.1|   4.19e-101   0.0001   1-416   1iir A:  
 
Weak hits:
gi|269126990|ref|YP_003300360.1|   5.71e-62   0.02   1-379   1iir A:  
gi|269127003|ref|YP_003300373.1|   3.38e-73   0.066   1-377   1iir A:  

Streptosporangium roseum DSM 43021 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|271966502|ref|YP_003340698.1|   2.1e-87   0.00000000148   1-407   1iir A:  
gi|271970007|ref|YP_003344203.1|   4.93e-93   0.0000582   1-403   1iir A:  
 
Weak hits:
gi|271963343|ref|YP_003337539.1|   1.2e-66   0.062   4-420   1iir A:  
gi|271965636|ref|YP_003339832.1|   8.79e-78   0.0059   1-373   1rrv A:  
gi|271969422|ref|YP_003343618.1|   2.47e-83   0.049   6-393   1rrv A:  

Streptomyces bingchenggensis BCW-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|374985747|ref|YP_004961242.1|   1.19e-87   0.00000000185   1-405   1iir A:  
 
Weak hits:
gi|374983740|ref|YP_004959235.1|   1.04e-66   0.018   9-399   1rrv A:  
gi|374985441|ref|YP_004960936.1|   1.16e-81   0.0094   1-389   1iir A:  
gi|374989603|ref|YP_004965098.1|   3.49e-65   0.012   1-387   1rrv A:  
gi|374989606|ref|YP_004965101.1|   2.29e-66   0.01   1-401   1pn3 A:  
gi|374989614|ref|YP_004965109.1|   3.11e-68   0.0082   1-391   1iir A:  
gi|374989616|ref|YP_004965111.1|   3.66e-70   0.0068   1-387   1rrv A:  
gi|374989623|ref|YP_004965118.1|   3.34e-71   0.0097   1-64,103-411   1iir A:  
gi|374989629|ref|YP_004965124.1|   1.96e-45   0.012   1-380   1iir A:  
gi|374991167|ref|YP_004966662.1|   3.49e-79   0.053   1-56,98-428   1rrv A:  
gi|374992200|ref|YP_004967695.1|   6.28e-66   0.00042   1-373   1rrv A:  

Streptomyces violaceusniger Tu 4113 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|345009502|ref|YP_004811856.1|   4.4e-83   0.0000223   1-405   1iir A:  
 
Weak hits:
gi|345011389|ref|YP_004813743.1|   3.21e-80   0.047   1-412   1rrv A:  
gi|345012321|ref|YP_004814675.1|   1.22e-66   0.021   7-425   1iir A:  
gi|345012687|ref|YP_004815041.1|   7.59e-69   0.064   17-406   1rrv A:  
gi|345015319|ref|YP_004817673.1|   5.5e-79   0.061   12-402   1rrv A:  
gi|345015402|ref|YP_004817756.1|   3.14e-41   0.012   1-219,246-414   1iir A:  

Streptomyces avermitilis MA-4680 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|29833727|ref|NP_828361.1|   9.87e-85   0.0000513   1-423   1iir A:  
 
Weak hits:
gi|29831273|ref|NP_825907.1|   0.0235   0.075   118-215   1rrv A:  
gi|29833900|ref|NP_828534.1|   9.42e-72   0.035   1-385   1rrv A:  

Streptomyces cattleya NRRL 8057 = DSM 46488 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386352030|ref|YP_006050277.1|   5.1e-87   0.00000000495   1-404   1iir A:  
gi|386356589|ref|YP_006054835.1|   3.45e-84   0.0000719   1-405   1iir A:  
 
Weak hits:
gi|386352999|ref|YP_006051246.1|   0.0146   0.034   69-165   1iir A:  

Streptomyces scabiei 87.22 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|290955424|ref|YP_003486606.1|   1.17e-78   0.0000711   1-409   1iir A:  
gi|290960598|ref|YP_003491780.1|   1.54e-65   0.0000851   2-402   1iir A:  
 
Weak hits:
gi|290956496|ref|YP_003487678.1|   3.14e-76   0.053   53-443   1rrv A:  
gi|290962689|ref|YP_003493871.1|   9.42e-82   0.00044   8-419   1rrv A:  

Streptomyces hygroscopicus subsp. jinggangensis 5008 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386837994|ref|YP_006243052.1|   1.4e-69   0.0000000212   8-371   1iir A:  
gi|386844233|ref|YP_006249291.1|   8.03e-73   0.0000574   2-406   1iir A:  
 
Weak hits:
gi|386843253|ref|YP_006248311.1|   1.88e-80   0.059   6-393   1rrv A:  

Actinosynnema mirum DSM 43827 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|256377957|ref|YP_003101617.1|   2.86e-78   0.0000000185   3-396   1iir A:  
 
Weak hits:
gi|256377009|ref|YP_003100669.1|   2.09e-63   0.0042   1-326   1iir A:  
gi|256377296|ref|YP_003100956.1|   8.38e-61   0.047   1-394   1iir A:  
gi|256378397|ref|YP_003102057.1|   7.21e-42   0.0084   1-200,242-419   1rrv A:  
gi|256378398|ref|YP_003102058.1|   1.19e-61   0.0098   1-389   1rrv A:  
gi|256378562|ref|YP_003102222.1|   0.000165   0.061   5-319   1iir A:  
gi|256378854|ref|YP_003102514.1|   1.26e-82   0.00027   1-431   1iir A:  
gi|256378857|ref|YP_003102517.1|   4.71e-81   0.00029   1-426   1iir A:  
gi|256378987|ref|YP_003102647.1|   4.71e-61   0.0034   1-375   1iir A:  
gi|256378988|ref|YP_003102648.1|   2.66e-71   0.0045   1-387   1rrv A:  

Pseudonocardia dioxanivorans CB1190 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|331695788|ref|YP_004332027.1|   7.46e-95   0.0000109   1-414   1iir A:  
 
Weak hits:
gi|331697664|ref|YP_004333903.1|   0.00324   0.038   3-35   1pn3 A:  
gi|331697665|ref|YP_004333904.1|   5.38e-51   0.00084   1-313   1iir A:  
gi|331698942|ref|YP_004335181.1|   4.11e-72   0.013   1-402   1rrv A:  
gi|331699897|ref|YP_004336136.1|   3.87e-56   0.0056   1-368   1rrv A:  

Saccharopolyspora erythraea NRRL 2338 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|134103105|ref|YP_001108766.1|   2.98e-83   0.0000648   1-418   1iir A:  
 
Weak hits:
gi|134097261|ref|YP_001102922.1|   9.68e-65   0.0097   1-378   1rrv A:  
gi|134097325|ref|YP_001102986.1|   3.81e-88   0.0091   1-413   1rrv A:  
gi|134097332|ref|YP_001102993.1|   3.14e-97   0.0066   1-415   1iir A:  
gi|134098584|ref|YP_001104245.1|   4.71e-68   0.014   1-379   1iir A:  
gi|134098910|ref|YP_001104571.1|   4.45e-66   0.09   1-400   1rrv A:  
gi|134100002|ref|YP_001105663.1|   1.08e-78   0.0074   1-56,89-423   1rrv A:  
gi|134100203|ref|YP_001105864.1|   2.72e-59   0.031   1-394   1iir A:  
gi|134101003|ref|YP_001106664.1|   3.81e-76   0.023   2-397   1iir A:  
gi|134101177|ref|YP_001106838.1|   1.41e-68   0.027   1-388   1iir A:  
gi|134101682|ref|YP_001107343.1|   6.28e-74   0.0086   1-356   1iir A:  
gi|134102630|ref|YP_001108291.1|   3.77e-56   0.005   3-296   1iir A:  
gi|134103108|ref|YP_001108769.1|   0.000743   0.08   2-50   1rrv A:  

Amycolatopsis mediterranei U32 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|300785846|ref|YP_003766137.1|   1.77e-79   0.00000000655   3-397   1iir A:  
gi|300787370|ref|YP_003767661.1|   1.33e-84   0.00000000145   1-398   1iir A:  
 
Weak hits:
gi|300782570|ref|YP_003762861.1|   3.4e-58   0.047   1-378   1iir A:  
gi|300782837|ref|YP_003763128.1|   1e-70   0.012   1-383   1iir A:  
gi|300784756|ref|YP_003765047.1|   8.64e-77   0.003   1-395   1rrv A:  
gi|300786368|ref|YP_003766659.1|   2.55e-85   0.00021   5-401   1iir A:  
gi|300787269|ref|YP_003767560.1|   6e-76   0.011   1-384   1pn3 A:  
gi|300787281|ref|YP_003767572.1|   6.6e-69   0.026   1-387   1rrv A:  
gi|300787282|ref|YP_003767573.1|   1.29e-71   0.054   1-392   1iir A:  
gi|300787283|ref|YP_003767574.1|   1.19e-66   0.032   1-365   1iir A:  
gi|300787284|ref|YP_003767575.1|   1.06e-65   0.018   1-383   1rrv A:  
gi|300787285|ref|YP_003767576.1|   7.14e-74   0.029   1-377   1rrv A:  
gi|300787289|ref|YP_003767580.1|   5.34e-84   0.018   1-387   1rrv A:  
gi|300787290|ref|YP_003767581.1|   3.14e-68   0.039   1-380   1pn3 A:  
gi|300787293|ref|YP_003767584.1|   3.45e-75   0.0038   1-369   1rrv A:  
gi|300788299|ref|YP_003768590.1|   1.19e-72   0.0089   3-423   1iir A:  
gi|300789446|ref|YP_003769737.1|   0.0000000000175   0.059   18-131   1pn3 A:  
gi|300790507|ref|YP_003770798.1|   3.71e-57   0.034   1-310   1iir A:  
gi|300790901|ref|YP_003771192.1|   1.26e-71   0.01   1-364   1iir A:  

Kribbella flavida DSM 17836 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|284028366|ref|YP_003378297.1|   1.08e-84   0.00000000297   1-403   1iir A:  
 
Weak hits:
gi|284028305|ref|YP_003378236.1|   3.68e-71   0.00064   2-410   1iir A:  
gi|284030655|ref|YP_003380586.1|   0.00000000209   0.016   5-161   1rrv A:  
gi|284031794|ref|YP_003381725.1|   1.04e-73   0.028   1-372   1rrv A:  
gi|284033308|ref|YP_003383239.1|   0.00288   0.063   106-297   1rrv A:  

Microlunatus phosphovorus NM-1 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|336116584|ref|YP_004571351.1|   3.77e-89   0.0000338   1-413   1iir A:  
gi|336120615|ref|YP_004575401.1|   4.71e-85   0.0000762   1-418   1iir A:  
 
Weak hits:
gi|336115692|ref|YP_004570458.1|   6.28e-68   0.039   4-375   1iir A:  
gi|336116055|ref|YP_004570821.1|   1.22e-79   0.016   1-420   1iir A:  
gi|336116682|ref|YP_004571449.1|   7.33e-69   0.0031   1-399   1iir A:  
gi|336117253|ref|YP_004572020.1|   1.35e-32   0.093   2-135   1rrv A:  
gi|336119157|ref|YP_004573932.1|   0.0122   0.079   326-499   1rrv A:  
gi|336119252|ref|YP_004574029.1|   6.57e-66   0.049   3-389   1pn3 A:  
gi|336119269|ref|YP_004574046.1|   7.85e-51   0.0068   1-366   1rrv A:  
gi|336120625|ref|YP_004575411.1|   2.1e-69   0.0071   5-423   1rrv A:  

Salinispora arenicola CNS-205 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|159035850|ref|YP_001535103.1|   2.86e-97   0.0000857   1-423   1rrv A:  
 
Weak hits:
gi|159036906|ref|YP_001536159.1|   6.04e-59   0.029   1-378   1iir A:  
gi|159037455|ref|YP_001536708.1|   0.000000000011   0.09   22-185   1rrv A:  
gi|159037641|ref|YP_001536894.1|   1.19e-66   0.015   1-376   1iir A:  
gi|159037652|ref|YP_001536905.1|   8.75e-73   0.063   5-392   1iir A:  
gi|159037715|ref|YP_001536968.1|   6.63e-57   0.018   1-56,89-344   1rrv A:  
  0.000000000942   0.05   391-465   1pn3 A:  
gi|159037924|ref|YP_001537177.1|   6.77e-88   0.019   2-420   1rrv A:  
gi|159038497|ref|YP_001537750.1|   3.42e-53   0.048   1-56,89-346   1pn3 A:  

Micromonospora sp. L5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|315506640|ref|YP_004085527.1|   7.07e-82   0.0000000179   1-401   1iir A:  
 
Weak hits:
gi|315505142|ref|YP_004084029.1|   2.48e-74   0.012   1-56,99-412   1iir A:  
gi|315505150|ref|YP_004084037.1|   3.18e-79   0.0088   1-56,112-429   1rrv A:  
gi|315505153|ref|YP_004084040.1|   1.19e-82   0.0048   1-56,121-432   1iir A:  
gi|315505154|ref|YP_004084041.1|   1.37e-85   0.0073   1-56,89-417   1rrv A:  
gi|315505158|ref|YP_004084045.1|   9.11e-78   0.01   1-56,89-410   1rrv A:  
gi|315505161|ref|YP_004084048.1|   1.4e-78   0.02   1-56,94-425   1iir A:  
gi|315505176|ref|YP_004084063.1|   2.57e-66   0.012   1-63,102-400   1pn3 A:  
gi|315505180|ref|YP_004084067.1|   6.63e-65   0.03   1-376   1iir A:  
gi|315505420|ref|YP_004084307.1|   2.61e-72   0.011   1-383   1pn3 A:  
gi|315505431|ref|YP_004084318.1|   7.4e-66   0.014   1-381   1rrv A:  
gi|315506847|ref|YP_004085734.1|   0.000000000471   0.06   13-171   1rrv A:  

Micromonospora aurantiaca ATCC 27029 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|302866922|ref|YP_003835559.1|   7.07e-82   0.0000000179   1-401   1iir A:  
 
Weak hits:
gi|302868173|ref|YP_003836810.1|   7.4e-67   0.01   1-381   1rrv A:  
gi|302868184|ref|YP_003836821.1|   1.22e-72   0.011   1-383   1pn3 A:  
gi|302868444|ref|YP_003837081.1|   1.61e-64   0.03   1-376   1iir A:  
gi|302868448|ref|YP_003837085.1|   2.57e-66   0.012   1-63,102-400   1pn3 A:  
gi|302868463|ref|YP_003837100.1|   1.04e-78   0.021   1-56,94-425   1iir A:  
gi|302868466|ref|YP_003837103.1|   1.88e-77   0.01   1-56,89-410   1rrv A:  
gi|302868470|ref|YP_003837107.1|   1.37e-85   0.0073   1-56,89-417   1rrv A:  
gi|302868471|ref|YP_003837108.1|   3.45e-82   0.0051   1-56,121-432   1iir A:  
gi|302868474|ref|YP_003837111.1|   1.08e-78   0.0097   1-56,112-429   1rrv A:  
gi|302868482|ref|YP_003837119.1|   3.11e-75   0.012   1-56,99-412   1rrv A:  
gi|302870610|ref|YP_003839247.1|   0.000000000471   0.06   13-171   1rrv A:  

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View all assignments containing a Gtf glycosyltransferase domain in each group of genomes.

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Add assignments from individual genomes

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Select to display   Genome       Domains   Proteins
No Yes ALL   5790 5790
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Schizophyllum commune   2 2
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Podospora anserina   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   4 4
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus lunatus m118 v2.0   2 2
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   3 3
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus terreus NIH2624   3 3
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   1 1
No Yes Microlunatus phosphovorus NM-1   2 2
No Yes Salinispora arenicola CNS-205   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Symbiobacterium thermophilum IAM 14863   2 2
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   3 3
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   4 4
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Nocardia brasiliensis ATCC 700358   4 4
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Actinomyces viscosus C505   1 1
No Yes Sorangium cellulosum So0157-2   2 2
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3311 3310
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   72 72
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1927 1927
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   9 9
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   45 45

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