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Gtf glycosyltransferase family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 31 significant domains in 31 proteins.

Showing genomes 51 to 75 of 99
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Burkholderia ambifaria AMMD has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|115360204|ref|YP_777342.1|   1.12e-84   0.0000692   1-411   1iir A:  
 
Weak hits:
gi|115351752|ref|YP_773591.1|   4.52e-72   0.015   11-400   1iir A:  
gi|115359253|ref|YP_776391.1|   5.58e-83   0.00027   1-410   1pn3 A:  
gi|115360980|ref|YP_778117.1|   2.37e-63   0.031   4-410   1rrv A:  
gi|115360982|ref|YP_778119.1|   1.28e-77   0.029   1-424   1rrv A:  

Burkholderia cenocepacia HI2424 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116691819|ref|YP_837352.1|   8.03e-86   0.0000593   1-409   1iir A:  
 
Weak hits:
gi|116689786|ref|YP_835409.1|   2.77e-71   0.023   1-391   1iir A:  
gi|116693188|ref|YP_838721.1|   3.04e-82   0.0003   1-409   1pn3 A:  

Burkholderia multivorans ATCC 17616 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|189352288|ref|YP_001947915.1|   2.13e-87   0.0000369   1-403   1iir A:  

Bordetella parapertussis 12822 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|33595187|ref|NP_882830.1|   1.14e-75   0.000089   2-380   1iir A:  

Bordetella bronchiseptica RB50 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|33599470|ref|NP_887030.1|   1.4e-85   0.0000374   1-403   1iir A:  

Brevundimonas subvibrioides ATCC 15264 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|302382101|ref|YP_003817924.1|   1.57e-76   0.0000997   5-423   1iir A:  

Ketogulonigenium vulgarum WSH-001 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|385233807|ref|YP_005795149.1|   2.97e-77   0.0000699   1-410   1pn3 A:  

Tistrella mobilis KA081020-065 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|389877321|ref|YP_006370886.1|   1.47e-82   0.0000351   1-407   1iir A:  
 
Weak hits:
gi|389877878|ref|YP_006371443.1|   1.73e-23   0.016   13-383   1pn3 A:  
gi|389878551|ref|YP_006372116.1|   1.52e-68   0.00072   1-434   1rrv A:  

Rhizobium leguminosarum bv. viciae 3841 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116255534|ref|YP_771367.1|   6.6e-95   0.0000808   1-408   1iir A:  
 
Weak hits:
gi|116253397|ref|YP_769235.1|   0.0000000000571   0.033   2-97   1rrv A:  

Agrobacterium radiobacter K84 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|222082350|ref|YP_002541715.1|   2.37e-93   0.0000596   1-414   1iir A:  

Agrobacterium vitis S4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|222106724|ref|YP_002547515.1|   4.54e-89   0.0000526   1-417   1iir A:  
 
Weak hits:
gi|222109201|ref|YP_002551466.1|   1.79e-48   0.025   1-429   1rrv A:  

Rhodopseudomonas palustris BisA53 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|115524226|ref|YP_781137.1|   2.34e-101   0.0000246   1-412   1iir A:  

Nitrobacter winogradskyi Nb-255 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|75677033|ref|YP_319454.1|   6.85e-87   0.0000737   1-407   1iir A:  
 
Weak hits:
gi|75676740|ref|YP_319161.1|   0.00000000000199   0.067   54-412   1rrv A:  

Stenotrophomonas maltophilia K279a has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|190576386|ref|YP_001974231.1|   5.5e-83   0.0000397   1-402   1iir A:  

Xanthomonas albilineans GPE PC73 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|285017935|ref|YP_003375646.1|   3.11e-88   0.0000799   8-420   1iir A:  
 
Weak hits:
gi|285017182|ref|YP_003374893.1|   8.57e-84   0.00012   19-425   1iir A:  

Synechococcus elongatus PCC 6301 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|56752070|ref|YP_172771.1|   1.14e-78   0.0000748   2-363   1iir A:  
 
Weak hits:
gi|56752524|ref|YP_173225.1|   0.00636   0.071   97-262   1iir A:  

Cyanothece sp. PCC 7425 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|220910659|ref|YP_002485969.1|   5.65e-102   0.000044   1-414   1iir A:  
 
Weak hits:
gi|220908087|ref|YP_002483398.1|   0.0000000879   0.078   33-116   1rrv A:  
gi|220910525|ref|YP_002485836.1|   0.000000432   0.017   2-127   1iir A:  
gi|220910618|ref|YP_002485928.1|   1.48e-103   0.00012   1-416   1iir A:  

Streptomyces rapamycinicus NRRL 5491 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|557684398|ref|YP_008787864.1|   8.24e-85   0.00000000218   1-400   1iir A:  
 
Weak hits:
gi|557683111|ref|YP_008786571.1|   3.77e-71   0.083   4-400   1rrv A:  
gi|557683433|ref|YP_008786894.1|   1.95e-67   0.022   7-425   1iir A:  
gi|557684313|ref|YP_008787779.1|   2.01e-81   0.028   1-415   1rrv A:  
gi|557688327|ref|YP_008791868.1|   2.83e-75   0.064   10-394   1iir A:  
gi|557689001|ref|YP_008792556.1|   1.07e-39   0.011   1-220,267-431   1iir A:  
gi|557692048|ref|YP_008795613.1|   1.73e-68   0.069   17-412   1rrv A:  

Streptomyces davawensis JCM 4913 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|471320479|ref|YP_007519509.1|   1.14e-78   0.0000525   2-401   1iir A:  
 
Weak hits:
gi|471320483|ref|YP_007519513.1|   4.49e-78   0.00022   1-395   1rrv A:  
gi|471321828|ref|YP_007520858.1|   3.45e-58   0.0082   1-376   1rrv A:  
gi|471321838|ref|YP_007520868.1|   2.14e-69   0.015   13-387   1rrv A:  
gi|471321985|ref|YP_007521015.1|   3.14e-74   0.017   1-380   1pn3 A:  
gi|471323465|ref|YP_007522495.1|   0.0199   0.075   76-173   1rrv A:  
gi|471323707|ref|YP_007522737.1|   0.00276   0.042   7-115   1iir A:  

Streptomyces venezuelae ATCC 10712 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|408679162|ref|YP_006878989.1|   2.15e-75   0.00000000598   1-388   1iir A:  
 
Weak hits:
gi|408676256|ref|YP_006876083.1|   9.42e-45   0.012   1-380   1rrv A:  
gi|408681715|ref|YP_006881542.1|   6.28e-66   0.011   1-385   1iir A:  
gi|408682578|ref|YP_006882405.1|   1.81e-75   0.00013   36-440   1iir A:  

Streptomyces collinus Tu 365 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|529222954|ref|YP_008383775.1|   4.11e-85   0.0000265   1-397   1iir A:  
gi|529229720|ref|YP_008390541.1|   4.11e-85   0.0000265   1-397   1iir A:  
 
Weak hits:
gi|529223076|ref|YP_008383897.1|   2.27e-52   0.031   3-51,79-410   1iir A:  
gi|529225486|ref|YP_008386307.1|   4.57e-69   0.046   1-388   1rrv A:  
gi|529225487|ref|YP_008386308.1|   2.9e-58   0.0082   1-387   1rrv A:  
gi|529225490|ref|YP_008386311.1|   2.58e-64   0.0026   1-385   1rrv A:  
gi|529225492|ref|YP_008386313.1|   6.02e-64   0.014   1-384   1iir A:  
gi|529225493|ref|YP_008386314.1|   6.6e-58   0.012   1-384   1iir A:  
gi|529225495|ref|YP_008386316.1|   1.79e-72   0.012   1-382   1rrv A:  
gi|529229599|ref|YP_008390420.1|   2.27e-52   0.031   3-51,79-410   1iir A:  

Streptomyces cattleya NRRL 8057 = DSM 46488 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|357400537|ref|YP_004912462.1|   1.81e-80   0.0001   2-400   1iir A:  
gi|357408958|ref|YP_004920881.1|   5.1e-87   0.00000000495   1-404   1iir A:  
 
Weak hits:
gi|357408010|ref|YP_004919933.1|   0.0126   0.034   54-151   1iir A:  

Streptomyces hygroscopicus subsp. jinggangensis TL01 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|474980203|ref|YP_007690669.1|   1.4e-69   0.0000000212   8-371   1iir A:  
gi|474986444|ref|YP_007696910.1|   8.03e-73   0.0000574   2-406   1iir A:  
 
Weak hits:
gi|474985461|ref|YP_007695927.1|   1.88e-80   0.059   6-393   1rrv A:  

Saccharothrix espanaensis DSM 44229 has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|433606234|ref|YP_007038603.1|   3.77e-21   0.0000114   1-227   1iir A:  
gi|433607163|ref|YP_007039532.1|   3.45e-89   0.0000293   1-420   1iir A:  
gi|433608569|ref|YP_007040938.1|   1.99e-70   0.0000000598   1-389   1iir A:  
 
Weak hits:
gi|433602959|ref|YP_007035328.1|   3.11e-72   0.0086   1-370   1rrv A:  
gi|433606237|ref|YP_007038606.1|   5.14e-64   0.0074   1-319   1iir A:  
gi|433606373|ref|YP_007038742.1|   1.51e-65   0.052   1-379   1rrv A:  
gi|433606694|ref|YP_007039063.1|   3.14e-71   0.01   1-378   1rrv A:  
gi|433607633|ref|YP_007040002.1|   4.19e-78   0.017   1-64,92-419   1rrv A:  
gi|433607634|ref|YP_007040003.1|   1.16e-76   0.011   1-56,84-415   1iir A:  
gi|433607635|ref|YP_007040004.1|   1.43e-79   0.021   1-56,99-418   1iir A:  
gi|433607636|ref|YP_007040005.1|   1.18e-73   0.01   1-64,100-417   1rrv A:  
gi|433607637|ref|YP_007040006.1|   3.43e-82   0.0061   1-56,93-413   1rrv A:  
gi|433607638|ref|YP_007040007.1|   2.36e-79   0.014   1-56,88-417   1rrv A:  
gi|433607639|ref|YP_007040008.1|   5.02e-76   0.025   1-414   1iir A:  
gi|433607640|ref|YP_007040009.1|   8.48e-79   0.0083   1-56,94-418   1rrv A:  
gi|433607641|ref|YP_007040010.1|   7.99e-80   0.0062   1-56,100-420   1rrv A:  
gi|433607642|ref|YP_007040011.1|   6.28e-74   0.032   1-56,89-419   1iir A:  
gi|433607791|ref|YP_007040160.1|   1.02e-66   0.0075   1-381   1rrv A:  
gi|433607795|ref|YP_007040164.1|   1.85e-62   0.011   1-361   1pn3 A:  
gi|433610194|ref|YP_007042563.1|   0.011   0.075   980-1032   1rrv A:  
gi|433610240|ref|YP_007042609.1|   0.0377   0.05   133-245   1rrv A:  

Amycolatopsis mediterranei RB has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|532460590|ref|YP_008460242.1|   1.77e-79   0.00000000655   3-397   1iir A:  
gi|532462114|ref|YP_008461766.1|   1.33e-84   0.00000000145   1-398   1iir A:  
 
Weak hits:
gi|532457318|ref|YP_008456970.1|   3.4e-58   0.047   1-378   1iir A:  
gi|532457585|ref|YP_008457237.1|   1e-70   0.012   1-383   1iir A:  
gi|532459502|ref|YP_008459155.1|   8.64e-77   0.003   1-395   1rrv A:  
gi|532461112|ref|YP_008460764.1|   2.55e-85   0.00021   5-401   1iir A:  
gi|532462013|ref|YP_008461665.1|   6e-76   0.011   1-384   1pn3 A:  
gi|532462025|ref|YP_008461677.1|   6.6e-69   0.026   1-387   1rrv A:  
gi|532462026|ref|YP_008461678.1|   1.29e-71   0.054   1-392   1iir A:  
gi|532462027|ref|YP_008461679.1|   1.19e-66   0.032   1-365   1iir A:  
gi|532462028|ref|YP_008461680.1|   1.06e-65   0.018   1-383   1rrv A:  
gi|532462029|ref|YP_008461681.1|   7.14e-74   0.029   1-377   1rrv A:  
gi|532462033|ref|YP_008461685.1|   5.34e-84   0.018   1-387   1rrv A:  
gi|532462034|ref|YP_008461686.1|   3.14e-68   0.039   1-380   1pn3 A:  
gi|532462037|ref|YP_008461689.1|   3.45e-75   0.0038   1-369   1rrv A:  
gi|532463043|ref|YP_008462695.1|   1.19e-72   0.0089   3-423   1iir A:  
gi|532464186|ref|YP_008463839.1|   0.0000000000175   0.059   18-131   1pn3 A:  
gi|532465247|ref|YP_008464899.1|   3.71e-57   0.034   1-310   1iir A:  
gi|532465641|ref|YP_008465293.1|   1.26e-71   0.01   1-364   1iir A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   5790 5790
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Schizophyllum commune   2 2
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Podospora anserina   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 2 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   2 2
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   4 4
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus lunatus m118 v2.0   2 2
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   3 3
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus terreus NIH2624   3 3
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Synechococcus elongatus PCC 7942   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   1 1
No Yes Microlunatus phosphovorus NM-1   2 2
No Yes Salinispora arenicola CNS-205   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Symbiobacterium thermophilum IAM 14863   2 2
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Aromatoleum aromaticum EbN1   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Synechococcus elongatus PCC 6301   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   3 3
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   4 4
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Nocardia brasiliensis ATCC 700358   4 4
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Actinomyces viscosus C505   1 1
No Yes Sorangium cellulosum So0157-2   2 2
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3311 3310
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   72 72
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1927 1927
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   9 9
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   45 45

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