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  Home > Genomes > Hyphomicrobium denitrificans ATCC 51888 > Head-to-tail joining protein W, gpW domains


Head-to-tail joining protein W, gpW superfamily domain assignments
in
Hyphomicrobium denitrificans ATCC 51888


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View all assignments containing a Head-to-tail joining protein W, gpW domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   14532 14532
No Yes Pseudogulbenkiania sp. NH8B   1 1
No Yes Laribacter hongkongensis HLHK9   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Gluconobacter oxydans 621H   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   3 3
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella boydii CDC 3083-94   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Thiomicrospira crunogena XCL-2   1 1
No Yes Burkholderia lata   1 1
No Yes Acetobacter pasteurianus 386B   1 1
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Sinorhizobium meliloti SM11   2 2
No Yes Sinorhizobium meliloti BL225C   2 2
No Yes Glaciecola psychrophila 170   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   3 3
No Yes Escherichia coli JJ1886   2 2
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli O7:K1 str. CE10   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2050   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2071   4 4
No Yes Escherichia coli O104:H4 str. 2011C-3493   3 3
No Yes Escherichia coli NA114   2 2
No Yes Escherichia coli str. 'clone D i2'   2 2
No Yes Escherichia coli str. 'clone D i14'   2 2
No Yes Escherichia coli UM146   2 2
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   4 4
No Yes Escherichia coli IHE3034   3 3
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli IAI39   2 2
No Yes Escherichia coli UMN026   3 3
No Yes Escherichia coli 55989   2 2
No Yes Escherichia coli S88   3 3
No Yes Escherichia coli IAI1   2 2
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   4 4
No Yes Escherichia coli O103:H2 str. 12009   5 5
No Yes Escherichia coli UTI89   2 2
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli O55:H7 str. RM12579   4 4
No Yes Escherichia coli O55:H7 str. CB9615   5 5
No Yes Escherichia coli O26:H11 str. 11368   7 7
No Yes Escherichia coli CFT073   3 3
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   4 4
No Yes Escherichia coli O157:H7 str. Sakai   4 4
No Yes Escherichia coli O157:H7 str. EDL933   3 3
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   13393 13393
No Yes STRING v9.0.5 (STRING)   74 74
No Yes Uniprot 2018_03 genome   797 797
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   16 16
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 7
No Yes The Salmonella enterica Pan-genome (meta-genome)   16 16
No Yes UniProt viral sequences (Viral)   5 5

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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