SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


RecG, N-terminal domain superfamily domain assignments
in
all bacterial genomes

Network of domain occurrence in all genomes


Assignment details

(show help)

15 selected genomes have 15 significant domains in 15 proteins.


Marinitoga piezophila KA3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|374339208|ref|YP_005095944.1|   0.0000000017   3-94   RecG, N-terminal domain  
 
Weak hits:
gi|374340679|ref|YP_005097415.1|   0.0118   50-94   RecG, N-terminal domain  

Mesotoga prima MesG1.Ag.4.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|389843433|ref|YP_006345513.1|   0.00000000000471   2-93   RecG, N-terminal domain  

Kosmotoga olearia TBF 19.5.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|239616417|ref|YP_002939739.1|   0.000000000392   2-93   RecG, N-terminal domain  

Fervidobacterium pennivorans DSM 9078 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|383786907|ref|YP_005471476.1|   3.14e-24   1-91   RecG, N-terminal domain  

Fervidobacterium nodosum Rt17-B1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|154249701|ref|YP_001410526.1|   1.31e-32   1-93   RecG, N-terminal domain  

Thermosipho melanesiensis BI429 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|150019944|ref|YP_001305298.1|   2.62e-36   1-90   RecG, N-terminal domain  
 
Weak hits:
gi|150020922|ref|YP_001306276.1|   0.00327   460-524   RecG, N-terminal domain  

Thermosipho africanus TCF52B has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|217076377|ref|YP_002334093.1|   1.14e-26   1-86   RecG, N-terminal domain  
 
Weak hits:
gi|217077835|ref|YP_002335553.1|   0.0667   45-82   RecG, N-terminal domain  

Thermotoga lettingae TMO has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|157362881|ref|YP_001469648.1|   3.4e-34   1-100   RecG, N-terminal domain  

Thermotoga thermarum DSM 5069 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|338729821|ref|YP_004659213.1|   3.79e-18   1-95   RecG, N-terminal domain  

Thermotoga sp. RQ2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|170288540|ref|YP_001738778.1|   2.09e-33   1-88   RecG, N-terminal domain  

Thermotoga naphthophila RKU-10 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|281412262|ref|YP_003346341.1|   5.23e-31   1-88   RecG, N-terminal domain  

Thermotoga petrophila RKU-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|148269855|ref|YP_001244315.1|   1.83e-35   6-104   RecG, N-terminal domain  

Thermotoga neapolitana DSM 4359 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|222099455|ref|YP_002534023.1|   7.59e-19   2-73   RecG, N-terminal domain  

Thermotoga maritima MSB8 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|15642978|ref|NP_228020.1|   1.46e-38   7-105   RecG, N-terminal domain  

Thermotoga maritima MSB8 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|15642978|ref|NP_228020.1|   1.46e-38   7-105   RecG, N-terminal domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a RecG, N-terminal domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   190 190
No Yes Caenorhabditis briggsae 2   1 1
No Yes Marinitoga piezophila KA3   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Fervidobacterium pennivorans DSM 9078   1 1
No Yes Fervidobacterium nodosum Rt17-B1   1 1
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermosipho africanus TCF52B   1 1
No Yes Thermotoga lettingae TMO   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermotoga sp. RQ2   1 1
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga neapolitana DSM 4359   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 2
No Yes NCBI 2017_08 genome   71 71
No Yes STRING v9.0.5 (STRING)   11 11
No Yes Uniprot 2018_03 genome   63 63
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   6 6
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]