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Tricorn protease N-terminal domain family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1k32A   4.03e-49   0.0000000000514   15-286   1k32 A:39-319  
1n6eA   4.17e-49   0.0000000000514   41-312   1k32 A:39-319  
 
Weak hits:
1crzA   6.59e-56   0.012   128-401   1k32 A:39-319  
2hqsA   7.17e-56   0.012   134-407   1k32 A:39-319  
2ivzA   8.78e-56   0.012   156-429   1k32 A:39-319  

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Select to display   Genome       Domains   Proteins
No Yes ALL   2632 2632
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   2 2
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces scabiei 87.22   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Roseiflexus sp. RS-1   1 1
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Sulfobacillus acidophilus DSM 10332   1 1
No Yes Candidatus Cloacamonas acidaminovorans   1 1
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Sulfolobus islandicus Y.N.15.51   1 1
No Yes Sulfolobus solfataricus P2   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Pyrobaculum sp. 1860   1 1
No Yes Pyrobaculum arsenaticum DSM 13514   1 1
No Yes Pyrobaculum oguniense TE7   1 1
No Yes Pyrobaculum aerophilum str. IM2   1 1
No Yes Thermoproteus uzoniensis 768-20   1 1
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   2 2
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Chthonomonas calidirosea T49   1 1
No Yes Sulfobacillus acidophilus TPY   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Sulfolobus islandicus LAL14/1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   1 1
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   1 1
No Yes Sulfolobus islandicus L.D.8.5   1 1
No Yes Sulfolobus solfataricus 98/2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Ferroplasma acidarmanus fer1   2 2
No Yes 1_050719N (meta-genome)   3 3
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   2 2
No Yes Bath Hot Springs, filamentous community (meta-genome)   2 2
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1479 1479
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   28 28
No Yes Uniprot 2018_03 genome   875 875
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   24 24
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   72 72
No Yes TargetDB (Targets)   2 2

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