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Cap-Gly domain family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   23169 23169
No Yes Homo sapiens 76_38 Human 83 49
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 15 9
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 12
No Yes Pongo abelii 76_2 Sumatran orangutan 18 10
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 15 8
No Yes Papio anubis 76 Olive baboon 20 12
No Yes Macaca mulatta 76_1 Rhesus monkey 29 17
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 46 26
No Yes Otolemur garnettii 76_3 Small-eared galago 19 10
No Yes Microcebus murinus 76_1 Gray mouse lemur 13 9
No Yes Rattus norvegicus 76_5.0 Norway rat 17 11
No Yes Mus musculus 76_38 House mouse 41 24
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 15 8
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 13 9
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 16 10
No Yes Cavia porcellus 76_3 Domestic guinea pig 16 9
No Yes Oryctolagus cuniculus 76_2 Rabbit 15 9
No Yes Ochotona princeps 76 American pika 12 7
No Yes Tupaia belangeri 76 Northern tree shrew 10 7
No Yes Sus scrofa 76_10.2 Pig 14 9
No Yes Bos taurus 76_3.1 Cattle 16 9
No Yes Ovis aries 76_3.1 Sheep 15 9
No Yes Vicugna pacos 76_1 Alpaca 8 5
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 15 8
No Yes Mustela putorius furo 76_1.0 Domestic ferret 14 9
No Yes Ailuropoda melanoleuca 76_1 Giant panda 18 10
No Yes Canis familiaris 76_3.1 Dog 22 14
No Yes Felis catus 76_6.2 Domestic cat 16 9
No Yes Equus caballus 76_2 Horse 21 12
No Yes Myotis lucifugus 76_2.0 Little brown bat 16 9
No Yes Pteropus vampyrus 76_1 Large flying fox 15 8
No Yes Sorex araneus 76_1 European shrew 9 5
No Yes Erinaceus europaeus 76 Western European hedgehog 13 9
No Yes Procavia capensis 76_1 Cape rock hyrax 14 7
No Yes Loxodonta africana 76_3 African savanna elephant 21 13
No Yes Echinops telfairi 76 Small Madagascar hedgehog 11 6
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 45 26
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 7 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 15 8
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 22 13
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 16 10
No Yes Ornithorhynchus anatinus 76_5 Platypus 11 6
No Yes Saccoglossus kowalevskii v3.0   13 8
No Yes Petromyzon marinus 76_7.0 Sea lamprey 8 6
No Yes Meleagris gallopavo 76_2 Turkey 12 6
No Yes Gallus gallus 76_4 Chicken 8 5
No Yes Anas platyrhynchos 76_1.0 Mallard 12 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 14 9
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 12 7
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 19 11
No Yes Anolis carolinensis 76_2.0 Green anole 15 10
No Yes Xenopus laevis African clawed frog 19 14
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 17 10
No Yes Latimeria chalumnae 76_1 Coelacanth 18 11
No Yes Lepisosteus oculatus 76 Spotted gar 27 17
No Yes Gadus morhua 76_1 Atlantic cod 18 11
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 21 14
No Yes Takifugu rubripes 76_4 Torafugu 72 44
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 31 19
No Yes Oryzias latipes 76_1 Japanese medaka 25 16
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 20 12
No Yes Poecilia formosa 76 Amazon molly 20 12
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 25 16
No Yes Astyanax mexicanus 76 Mexican tetra 18 12
No Yes Danio rerio 76_9 Zebrafish 30 18
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 5 3
No Yes Ciona intestinalis 76 Vase tunicate 4 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 3 3
No Yes Adineta vaga   4 4
No Yes Octopus bimaculoides 280   8 6
No Yes Crassostrea gigas 22 Pacific oyster 6 3
No Yes Lottia gigantea Owl limpet 6 3
No Yes Helobdella robusta   8 6
No Yes Capitella sp. I   8 6
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 2
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 3 2
No Yes Nasonia vitripennis Jewel wasp 3 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 23 13
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 2
No Yes Linepithema humile v1.1 Argentine ant 3 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 3 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 3 2
No Yes Atta cephalotes v1.1   3 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 3 2
No Yes Lucilia cuprina Australian sheep blowfly 3 2
No Yes Drosophila grimshawi 1.3   2 1
No Yes Drosophila willistoni 1.3   2 1
No Yes Drosophila pseudoobscura 2.13   3 2
No Yes Drosophila persimilis 1.3   3 2
No Yes Drosophila yakuba 1.3   2 1
No Yes Drosophila simulans 1.3   3 2
No Yes Drosophila sechellia 1.3   2 1
No Yes Drosophila melanogaster 76_5 Fruit fly 28 14
No Yes Drosophila erecta 1.3   2 1
No Yes Drosophila ananassae 1.3   2 1
No Yes Drosophila virilis 1.2   2 1
No Yes Drosophila mojavensis 1.3   3 2
No Yes Megaselia scalaris 22   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 4 4
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 3
No Yes Anopheles darlingi 22 American malaria mosquito 4 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 4 3
No Yes Tribolium castaneum 3.0 Red flour beetle 3 2
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 1
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   4 3
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   5 4
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 6 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 3 2
No Yes Pristionchus pacificus   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Trichinella spiralis 22   2 1
No Yes Hymenolepis microstoma   4 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   4 3
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   7 7
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   6 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 4
No Yes Hydra vulgaris   5 4
No Yes Amphimedon queenslandica   2 2
No Yes Trichoplax adhaerens   2 2
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sporisorium reilianum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Coniophora puteana   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Citrus clementina v165   3 3
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Medicago truncatula Barrel medic 3 3
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Trichomonas vaginalis   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 25 15
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 19 10
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 91 53
No Yes Homo sapiens (NCBI version) Human 31 17
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 16 9
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Homo sapiens 69_37 Human 21 11
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 15 9
No Yes Gorilla gorilla 69_3.1 Western gorilla 19 10
No Yes Pongo abelii 69_2 Sumatran orangutan 18 10
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 16 9
No Yes Macaca mulatta 69_1 Rhesus monkey 14 8
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 19 10
No Yes Otolemur garnettii 69_3 Small-eared galago 16 9
No Yes Microcebus murinus 69_1 Gray mouse lemur 13 9
No Yes Rattus norvegicus 69_3.4 Norway rat 16 9
No Yes Mus musculus 69_38 House mouse 19 10
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 15 8
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 13 9
No Yes Cavia porcellus 69_3 Domestic guinea pig 16 9
No Yes Oryctolagus cuniculus 69_2 Rabbit 17 10
No Yes Ochotona princeps 69 American pika 12 7
No Yes Tupaia belangeri 69 Northern tree shrew 10 7
No Yes Sus scrofa 69_10.2 Pig 12 8
No Yes Bos taurus 69_3.1 Cattle 16 9
No Yes Vicugna pacos 69_1 Alpaca 8 5
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 15 8
No Yes Mustela putorius furo 69_1.0 Domestic ferret 14 9
No Yes Ailuropoda melanoleuca 69_1 Giant panda 16 9
No Yes Canis familiaris 69_3.1 Dog 17 10
No Yes Felis catus 69 Domestic cat 8 6
No Yes Equus caballus 69_2 Horse 18 10
No Yes Myotis lucifugus 69_2.0 Little brown bat 16 9
No Yes Pteropus vampyrus 69_1 Large flying fox 15 8
No Yes Sorex araneus 69_1 European shrew 9 5
No Yes Erinaceus europaeus 69 Western European hedgehog 13 9
No Yes Procavia capensis 69_1 Cape rock hyrax 14 7
No Yes Loxodonta africana 69_3 African savanna elephant 16 10
No Yes Echinops telfairi 69 Small Madagascar hedgehog 11 6
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 8 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 7 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 15 8
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 13 7
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 16 10
No Yes Ornithorhynchus anatinus 69_5 Platypus 11 6
No Yes Petromyzon marinus 69_7.0 Sea lamprey 7 5
No Yes Meleagris gallopavo 69_2 Turkey 12 6
No Yes Gallus gallus 69_2 Chicken 11 5
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 14 9
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 15 8
No Yes Anolis carolinensis 69_2.0 Green anole 15 10
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 13 8
No Yes Latimeria chalumnae 69_1 Coelacanth 17 10
No Yes Gadus morhua 69_1 Atlantic cod 18 11
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 15 10
No Yes Takifugu rubripes 69_4 Torafugu 20 12
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 20 12
No Yes Oryzias latipes 69_1 Japanese medaka 20 12
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 20 12
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 18 11
No Yes Danio rerio 69_9 Zebrafish 16 10
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 2
No Yes Ciona intestinalis 69 Vase tunicate 4 3
No Yes Drosophila melanogaster 69_5 Fruit fly 2 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes NCBI 2017_08 genome   13386 7691
No Yes Protozoadb 2010_08 (Protozoadb)   2 2
No Yes STRING v9.0.5 (STRING)   452 285
No Yes Uniprot 2018_03 genome   5210 3289
No Yes PDB chains (SCOP 1.75) (PDB)   22 22
No Yes Protein Data Bank (all PDB sequenc)   34 34
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   137 137
No Yes TargetDB (Targets)   30 24

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