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IolI-like family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 101 to 125 of 230
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Listeria monocytogenes serotype 4b str. LL195 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|424715116|ref|YP_007015831.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|424713758|ref|YP_007014473.1|   9.26e-30   0.018   4-239   1i60 A:  
gi|424715043|ref|YP_007015758.1|   1.13e-53   0.028   2-313   1i60 A:  

Listeria monocytogenes 07PF0776 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386732982|ref|YP_006206478.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|386731634|ref|YP_006205130.1|   6.63e-30   0.018   4-237   1i60 A:  
gi|386732906|ref|YP_006206402.1|   2.75e-53   0.03   1-311   1i60 A:  

Listeria monocytogenes M7 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386027623|ref|YP_005948399.1|   5.85e-74   0.000000000127   10-282   2g0w A:10-284  
 
Weak hits:
gi|386026199|ref|YP_005946975.1|   7.88e-30   0.018   4-236   1i60 A:  
gi|386027548|ref|YP_005948324.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|386028243|ref|YP_005949019.1|   7.19e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes J1-220 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|525734591|ref|YP_008290528.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|525733333|ref|YP_008289083.1|   6.63e-30   0.018   4-237   1i60 A:  
gi|525734517|ref|YP_008290417.1|   2.75e-53   0.03   1-311   1i60 A:  

Listeria monocytogenes J1816 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|525722652|ref|YP_008287326.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|525721454|ref|YP_008285849.1|   6.63e-30   0.018   4-237   1i60 A:  
gi|525722722|ref|YP_008287399.1|   2.75e-53   0.03   1-311   1i60 A:  

Listeria monocytogenes SLCC2376 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404408675|ref|YP_006691390.1|   5.85e-74   0.000000000127   10-282   2g0w A:10-284  
 
Weak hits:
gi|404407331|ref|YP_006690046.1|   2.49e-30   0.046   3-236   2q02 A:1-271  
gi|404408599|ref|YP_006691314.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|404409217|ref|YP_006691932.1|   3.45e-50   0.065   1-260   1i60 A:  

Listeria monocytogenes SLCC5850 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404411541|ref|YP_006697129.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|404410118|ref|YP_006695706.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|404411466|ref|YP_006697054.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|404412084|ref|YP_006697672.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes ATCC 19117 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|405750632|ref|YP_006674098.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|405749233|ref|YP_006672699.1|   6.63e-30   0.018   4-237   1i60 A:  
gi|405750519|ref|YP_006673985.1|   2.75e-53   0.03   1-311   1i60 A:  

Listeria monocytogenes L312 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|406705028|ref|YP_006755382.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|406703654|ref|YP_006754008.1|   6.63e-30   0.018   4-237   1i60 A:  
gi|406704953|ref|YP_006755307.1|   2.75e-53   0.03   1-311   1i60 A:  

Listeria monocytogenes SLCC2479 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|405759286|ref|YP_006688562.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|405757876|ref|YP_006687152.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|405759212|ref|YP_006688488.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|405759901|ref|YP_006689177.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes SLCC7179 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404414318|ref|YP_006699905.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|404412963|ref|YP_006698550.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|404414243|ref|YP_006699830.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|404414911|ref|YP_006700498.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes SLCC2540 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|405756412|ref|YP_006679876.1|   2.07e-72   0.00000000015   10-282   2g0w A:10-284  
 
Weak hits:
gi|405754956|ref|YP_006678420.1|   6.63e-30   0.018   4-237   1i60 A:  
gi|405756337|ref|YP_006679801.1|   3.14e-53   0.028   1-311   1i60 A:  

Listeria monocytogenes SLCC2378 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|405753506|ref|YP_006676971.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|405752098|ref|YP_006675563.1|   9.26e-30   0.018   4-239   1i60 A:  
gi|405753394|ref|YP_006676859.1|   3.14e-53   0.028   1-311   1i60 A:  

Listeria monocytogenes serotype 1/2b str. SLCC2755 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404281854|ref|YP_006682752.1|   8.19e-74   0.000000000117   10-282   2g0w A:10-284  
 
Weak hits:
gi|404280430|ref|YP_006681328.1|   6.91e-30   0.018   4-237   1i60 A:  
gi|404281779|ref|YP_006682677.1|   3.14e-53   0.028   1-311   1i60 A:  

Listeria monocytogenes serotype 1/2c str. SLCC2372 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404284732|ref|YP_006685629.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|404283321|ref|YP_006684218.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|404284658|ref|YP_006685555.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|404285345|ref|YP_006686242.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes serotype 7 str. SLCC2482 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|404287667|ref|YP_006694253.1|   8.19e-74   0.000000000117   10-282   2g0w A:10-284  
 
Weak hits:
gi|404286288|ref|YP_006692874.1|   6.91e-30   0.018   4-237   1i60 A:  
gi|404287591|ref|YP_006694177.1|   3.14e-53   0.028   1-311   1i60 A:  

Listeria monocytogenes 08-5578 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|284802681|ref|YP_003414546.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|284800277|ref|YP_003412142.1|   4.15e-51   0.061   1-260   1i60 A:  
gi|284801209|ref|YP_003413074.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|284802607|ref|YP_003414472.1|   1.06e-52   0.028   1-311   1i60 A:  

Listeria monocytogenes 08-5923 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|284995823|ref|YP_003417591.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|284993462|ref|YP_003415230.1|   4.15e-51   0.061   1-260   1i60 A:  
gi|284994351|ref|YP_003416119.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|284995749|ref|YP_003417517.1|   1.06e-52   0.028   1-311   1i60 A:  

Listeria monocytogenes L99 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386009010|ref|YP_005927288.1|   5.85e-74   0.000000000127   10-282   2g0w A:10-284  
 
Weak hits:
gi|386007606|ref|YP_005925884.1|   7.88e-30   0.018   4-236   1i60 A:  
gi|386008935|ref|YP_005927213.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|386009616|ref|YP_005927894.1|   7.19e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes HCC23 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|217963604|ref|YP_002349282.1|   5.85e-74   0.000000000127   10-282   2g0w A:10-284  
 
Weak hits:
gi|217963680|ref|YP_002349358.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|217965024|ref|YP_002350702.1|   7.88e-30   0.018   4-236   1i60 A:  
gi|217965957|ref|YP_002351635.1|   7.19e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes 10403S has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386044547|ref|YP_005963352.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|386043204|ref|YP_005962009.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|386044473|ref|YP_005963278.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|386045140|ref|YP_005963945.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes J0161 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386047890|ref|YP_005966222.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|386046541|ref|YP_005964873.1|   4.15e-27   0.022   5-248   1i60 A:  
gi|386047816|ref|YP_005966148.1|   1.96e-53   0.03   1-311   1i60 A:  
gi|386048568|ref|YP_005966900.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes Finland 1998 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386054489|ref|YP_005972047.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|386053147|ref|YP_005970705.1|   1.8e-29   0.016   3-248   1i60 A:  
gi|386054415|ref|YP_005971973.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|386055014|ref|YP_005972572.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes FSL R2-561 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386051210|ref|YP_005969201.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|386049807|ref|YP_005967798.1|   6.63e-27   0.022   5-248   1i60 A:  
gi|386051136|ref|YP_005969127.1|   2.75e-53   0.03   1-311   1i60 A:  
gi|386051819|ref|YP_005969810.1|   4.15e-51   0.061   1-260   1i60 A:  

Listeria monocytogenes serotype 4b str. F2365 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|46908468|ref|YP_014857.1|   7.75e-74   0.000000000113   10-282   2g0w A:10-284  
 
Weak hits:
gi|46907112|ref|YP_013501.1|   9.26e-30   0.018   4-239   1i60 A:  
gi|46908393|ref|YP_014782.1|   3.14e-53   0.028   1-311   1i60 A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   17118 17118
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   1 1
No Yes Ruminococcus sp.   2 2
No Yes Clostridium difficile 630   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Tetragenococcus halophilus NBRC 12172   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Lactobacillus salivarius CECT 5713   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Streptococcus uberis 0140J   1 1
No Yes Streptococcus parauberis KCTC 11537   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Geobacillus kaustophilus HTA426   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus megaterium DSM 319   1 1
No Yes Spirochaeta smaragdinae DSM 11293   2 2
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Acidiphilium multivorum AIU301   2 2
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   2 2
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium kluyveri NBRC 12016   1 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   2 2
No Yes Lactobacillus rhamnosus GG   2 2
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   1 1
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   1 1
No Yes Listeria monocytogenes 08-5923   1 1
No Yes Listeria monocytogenes L99   1 1
No Yes Listeria monocytogenes HCC23   1 1
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   1 1
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   2 2
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   2 2
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   2 2
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   2 2
No Yes Salmonella enterica serovar Bovismorbificans genomics   2 2
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   2 2
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   2 2
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Combined (meta-genome)   9 9
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   9 9
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   5 5
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   5 5
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   3 3
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   14790 14790
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   70 70
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1750 1750
No Yes Global Ocean Sampling Expedition (GOS)   13 13
No Yes NCBI plasmid sequences (Plasmids)   23 23
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   10 10
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   30 30
No Yes TargetDB (Targets)   4 4
No Yes The Salmonella enterica Pan-genome (meta-genome)   24 24

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