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Adenylylcyclase toxin (the edema factor) superfamily domain assignments
in
PDB chains (SCOP 1.75)

Network of domain occurrence in all genomes


Assignment details

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PDB chains (SCOP 1.75) (PDB) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
1k8tA   5.93e-229   2-509   Adenylylcyclase toxin (the edema factor)  
1pk0A   2.27e-228   1-506   Adenylylcyclase toxin (the edema factor)  

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Select to display   Genome       Domains   Proteins
No Yes ALL   4276 4276
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Bacillus cereus 03BB102   1 1
No Yes Bacillus anthracis str. A0248   1 1
No Yes Desulfohalobium retbaense DSM 5692   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   2 2
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 2
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus cereus biovar anthracis str. CI   1 1
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. A2012   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Proteus mirabilis BB2000   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   2 2
No Yes Yersinia pestis A1122   2 2
No Yes Yersinia pestis Z176003   2 2
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   2 2
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   2 2
No Yes Yersinia pestis Nepal516   2 2
No Yes Yersinia pestis Antiqua   2 2
No Yes Yersinia pestis CO92   2 2
No Yes Yersinia pestis KIM10+   2 2
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   2 2
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3347 3317
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   33 33
No Yes Uniprot 2018_03 genome   378 353
No Yes NCBI plasmid sequences (Plasmids)   11 11
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   66 66
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   340 275

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