Select to display | Genome | | Domains | Proteins |
No Yes | ALL | | 4818 | 4818 |
No Yes | Pan troglodytes 76_2.1.4 | Chimpanzee | 1 | 1 |
No Yes | Ochotona princeps 76 | American pika | 1 | 1 |
No Yes | Ailuropoda melanoleuca 76_1 | Giant panda | 1 | 1 |
No Yes | Equus caballus 76_2 | Horse | 1 | 1 |
No Yes | Myotis lucifugus 76_2.0 | Little brown bat | 1 | 1 |
No Yes | Sorex araneus 76_1 | European shrew | 1 | 1 |
No Yes | Procavia capensis 76_1 | Cape rock hyrax | 1 | 1 |
No Yes | Macropus eugenii 76_1.0 | Tammar wallaby | 1 | 1 |
No Yes | Ornithorhynchus anatinus 76_5 | Platypus | 1 | 1 |
No Yes | Saccoglossus kowalevskii v3.0 | | 4 | 4 |
No Yes | Petromyzon marinus 76_7.0 | Sea lamprey | 1 | 1 |
No Yes | Taeniopygia guttata 76_3.2.4 | Zebra finch | 1 | 1 |
No Yes | Latimeria chalumnae 76_1 | Coelacanth | 1 | 1 |
No Yes | Tetraodon nigroviridis 76_8 | Spotted green pufferfish | 1 | 1 |
No Yes | Takifugu rubripes 76_4 | Torafugu | 1 | 1 |
No Yes | Oreochromis niloticus 76_1.0 | Nile tilapia | 1 | 1 |
No Yes | Crassostrea gigas 22 | Pacific oyster | 1 | 1 |
No Yes | Lottia gigantea | Owl limpet | 1 | 1 |
No Yes | Capitella sp. I | | 3 | 3 |
No Yes | Danaus plexippus OGS1.0 | Monarch butterfly | 1 | 1 |
No Yes | Daphnia pulex | Common water flea | 1 | 1 |
No Yes | Tetranychus urticae | Two-spotted spider mite | 1 | 1 |
No Yes | Pristionchus pacificus | | 1 | 1 |
No Yes | Meloidogyne incognita | Southern root-knot nematode | 2 | 2 |
No Yes | Caenorhabditis elegans 76_235 | Roundworm | 1 | 1 |
No Yes | Caenorhabditis briggsae 2 | | 1 | 1 |
No Yes | Hydra vulgaris | | 1 | 1 |
No Yes | Apiospora montagnei NRRL 25634 v1.0 | | 1 | 1 |
No Yes | Aspergillus fumigatus Af293 | | 1 | 1 |
No Yes | Aspergillus flavus NRRL3357 | | 1 | 1 |
No Yes | Pinus taeda | Loblolly pine | 1 | 1 |
No Yes | Gossypium raimondii v221 | | 5 | 5 |
No Yes | Citrus clementina v165 | | 3 | 3 |
No Yes | Citrus sinensis v154 | Sweet orange | 2 | 2 |
No Yes | Phaseolus vulgaris v186 | French bean | 1 | 1 |
No Yes | Malus domestica v196 | Apple | 1 | 1 |
No Yes | Prunus persica v139 | Peach | 1 | 1 |
No Yes | Vitis vinifera | Wine grape | 1 | 1 |
No Yes | Solanum lycopersicum v.2.3 | Tomato | 1 | 1 |
No Yes | Triticum aestivum 22 | Bread wheat | 3 | 3 |
No Yes | Panicum virgatum v202 | Switchgrass | 1 | 1 |
No Yes | Phytophthora sojae 1.1 | | 1 | 1 |
No Yes | Guillardia theta CCMP2712 v1.0 | | 1 | 1 |
No Yes | Halothece sp. PCC 7418 | | 1 | 1 |
No Yes | Rubrobacter xylanophilus DSM 9941 | | 1 | 1 |
No Yes | Thermomonospora curvata DSM 43183 | | 1 | 1 |
No Yes | Kribbella flavida DSM 17836 | | 1 | 1 |
No Yes | Salinispora tropica CNB-440 | | 1 | 1 |
No Yes | Clostridium cellulolyticum H10 | | 1 | 1 |
No Yes | Ruminococcus albus 7 | | 1 | 1 |
No Yes | Clostridium lentocellum DSM 5427 | | 1 | 1 |
No Yes | Clostridium sp. BNL1100 | | 1 | 1 |
No Yes | Clostridium cellulovorans 743B | | 2 | 2 |
No Yes | Paenibacillus mucilaginosus 3016 | | 1 | 1 |
No Yes | Paenibacillus polymyxa M1 | | 1 | 1 |
No Yes | Bacillus thuringiensis str. Al Hakam | | 1 | 1 |
No Yes | Bacillus cereus 03BB102 | | 1 | 1 |
No Yes | Bacillus anthracis str. A0248 | | 1 | 1 |
No Yes | Bacillus clausii KSM-K16 | | 1 | 1 |
No Yes | Gemmatimonas aurantiaca T-27 | | 1 | 1 |
No Yes | Melioribacter roseus P3M | | 2 | 2 |
No Yes | Haliscomenobacter hydrossis DSM 1100 | | 1 | 1 |
No Yes | Niastella koreensis GR20-10 | | 2 | 2 |
No Yes | Chitinophaga pinensis DSM 2588 | | 1 | 1 |
No Yes | Cyclobacterium marinum DSM 745 | | 2 | 2 |
No Yes | Leadbetterella byssophila DSM 17132 | | 1 | 1 |
No Yes | Prevotella ruminicola 23 | | 1 | 1 |
No Yes | Bacteroides salanitronis DSM 18170 | | 3 | 3 |
No Yes | Bacteroides vulgatus ATCC 8482 | | 2 | 2 |
No Yes | Bacteroides thetaiotaomicron VPI-5482 | | 1 | 1 |
No Yes | Pedobacter heparinus DSM 2366 | | 1 | 1 |
No Yes | Sphingobacterium sp. 21 | | 1 | 1 |
No Yes | Flavobacteriaceae bacterium 3519-10 | | 1 | 1 |
No Yes | Flavobacterium branchiophilum FL-15 | | 1 | 1 |
No Yes | Flavobacterium johnsoniae UW101 | | 2 | 2 |
No Yes | Fibrobacter succinogenes subsp. succinogenes S85 | | 1 | 1 |
No Yes | Planctomyces brasiliensis DSM 5305 | | 2 | 2 |
No Yes | Planctomyces limnophilus DSM 3776 | | 1 | 1 |
No Yes | Rhodopirellula baltica SH 1 | | 4 | 4 |
No Yes | Pirellula staleyi DSM 6068 | | 2 | 2 |
No Yes | Opitutus terrae PB90-1 | | 1 | 1 |
No Yes | Dictyoglomus turgidum DSM 6724 | | 1 | 1 |
No Yes | Candidatus Solibacter usitatus Ellin6076 | | 4 | 4 |
No Yes | Granulicella tundricola MP5ACTX9 | | 1 | 1 |
No Yes | Granulicella mallensis MP5ACTX8 | | 2 | 2 |
No Yes | Geobacter sp. M21 | | 1 | 1 |
No Yes | Geobacter bemidjiensis Bem | | 1 | 1 |
No Yes | Pelobacter carbinolicus DSM 2380 | | 1 | 1 |
No Yes | Stigmatella aurantiaca DW4/3-1 | | 1 | 1 |
No Yes | Corallococcus coralloides DSM 2259 | | 1 | 1 |
No Yes | Variovorax paradoxus S110 | | 1 | 1 |
No Yes | Asticcacaulis excentricus CB 48 | | 4 | 4 |
No Yes | Brevundimonas subvibrioides ATCC 15264 | | 3 | 3 |
No Yes | Caulobacter sp. K31 | | 1 | 1 |
No Yes | Caulobacter crescentus NA1000 | | 1 | 1 |
No Yes | Phenylobacterium zucineum HLK1 | | 1 | 1 |
No Yes | Hirschia baltica ATCC 49814 | | 1 | 1 |
No Yes | Magnetospirillum magneticum AMB-1 | | 1 | 1 |
No Yes | Mesorhizobium opportunistum WSM2075 | | 1 | 1 |
No Yes | Saccharophagus degradans 2-40 | | 2 | 2 |
No Yes | Teredinibacter turnerae T7901 | | 1 | 1 |
No Yes | Cellvibrio japonicus Ueda107 | | 3 | 3 |
No Yes | Marinomonas mediterranea MMB-1 | | 1 | 1 |
No Yes | Pseudoxanthomonas suwonensis 11-1 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. campestris str. B100 | | 2 | 2 |
No Yes | Dickeya zeae Ech1591 | | 1 | 1 |
No Yes | Methanocella paludicola SANAE | | 1 | 1 |
No Yes | Methanosarcina mazei Go1 | | 2 | 2 |
No Yes | Methanopyrus kandleri AV19 | | 2 | 2 |
No Yes | Thermococcus kodakarensis KOD1 | | 1 | 1 |
No Yes | Thermococcus barophilus MP | | 1 | 1 |
No Yes | Caenorhabditis elegans WormBase WS218 (WormBase) | Roundworm | 1 | 1 |
No Yes | Aspergillus fumigatus A1163 | | 1 | 1 |
No Yes | Cyanothece sp. ATCC 51142 | | 1 | 1 |
No Yes | Amycolatopsis orientalis HCCB10007 | | 1 | 1 |
No Yes | Thermacetogenium phaeum DSM 12270 | | 1 | 1 |
No Yes | Paenibacillus mucilaginosus KNP414 | | 1 | 1 |
No Yes | Paenibacillus mucilaginosus K02 | | 1 | 1 |
No Yes | Paenibacillus polymyxa CR1 | | 1 | 1 |
No Yes | Paenibacillus polymyxa SC2 | | 1 | 1 |
No Yes | Paenibacillus polymyxa E681 | | 1 | 1 |
No Yes | Bacillus thuringiensis serovar konkukian str. 97-27 | | 1 | 1 |
No Yes | Bacillus cereus biovar anthracis str. CI | | 1 | 1 |
No Yes | Bacillus cereus AH820 | | 1 | 1 |
No Yes | Bacillus cereus Q1 | | 1 | 1 |
No Yes | Bacillus cereus F837/76 | | 1 | 1 |
No Yes | Bacillus cereus E33L | | 1 | 1 |
No Yes | Bacillus anthracis str. H9401 | | 1 | 1 |
No Yes | Bacillus anthracis str. CDC 684 | | 1 | 1 |
No Yes | Bacillus anthracis str. 'Ames Ancestor' | | 1 | 1 |
No Yes | Bacillus anthracis str. Sterne | | 1 | 1 |
No Yes | Bacillus anthracis str. Ames | | 1 | 1 |
No Yes | Echinicola vietnamensis DSM 17526 | | 1 | 1 |
No Yes | Bacteroides xylanisolvens XB1A | | 1 | 1 |
No Yes | Fibrobacter succinogenes subsp. succinogenes S85 | | 1 | 1 |
No Yes | Singulisphaera acidiphila DSM 18658 | | 1 | 1 |
No Yes | Sorangium cellulosum So0157-2 | | 2 | 2 |
No Yes | Myxococcus stipitatus DSM 14675 | | 1 | 1 |
No Yes | Variovorax paradoxus EPS | | 1 | 1 |
No Yes | Caulobacter crescentus CB15 | | 1 | 1 |
No Yes | Simiduia agarivorans SA1 = DSM 21679 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. raphani 756C | | 1 | 1 |
No Yes | Xanthomonas campestris pv. campestris str. 8004 | | 1 | 1 |
No Yes | Xanthomonas campestris pv. campestris str. ATCC 33913 | | 1 | 1 |
No Yes | Methanolobus psychrophilus R15 | | 1 | 1 |
No Yes | Methanosarcina mazei Tuc01 | | 1 | 1 |
No Yes | Methanobacterium sp. SWAN-1 | | 1 | 1 |
No Yes | Lotus japonicus (Early assembly) | | 1 | 1 |
No Yes | Malus x domestica (Duplicate) | Apple | 1 | 1 |
No Yes | Ricinus communis (Early assembly) | Castor bean | 2 | 2 |
No Yes | Nicotiana benthamiana 0.4.4 (Early draft) | | 2 | 2 |
No Yes | Solanum pimpinellifolium A-1.0 (Early draft) | Currant tomato | 1 | 1 |
No Yes | Solanum lycopersicum v2.3 (Early assembly) | Tomato | 1 | 1 |
No Yes | Pan troglodytes 69_2.1.4 | Chimpanzee | 1 | 1 |
No Yes | Ochotona princeps 69 | American pika | 1 | 1 |
No Yes | Ailuropoda melanoleuca 69_1 | Giant panda | 1 | 1 |
No Yes | Equus caballus 69_2 | Horse | 1 | 1 |
No Yes | Myotis lucifugus 69_2.0 | Little brown bat | 1 | 1 |
No Yes | Sorex araneus 69_1 | European shrew | 1 | 1 |
No Yes | Procavia capensis 69_1 | Cape rock hyrax | 1 | 1 |
No Yes | Macropus eugenii 69_1.0 | Tammar wallaby | 1 | 1 |
No Yes | Ornithorhynchus anatinus 69_5 | Platypus | 1 | 1 |
No Yes | Petromyzon marinus 69_7.0 | Sea lamprey | 1 | 1 |
No Yes | Taeniopygia guttata 69_3.2.4 | Zebra finch | 1 | 1 |
No Yes | Latimeria chalumnae 69_1 | Coelacanth | 1 | 1 |
No Yes | Tetraodon nigroviridis 69_8 | Spotted green pufferfish | 1 | 1 |
No Yes | Takifugu rubripes 69_4 | Torafugu | 1 | 1 |
No Yes | Oreochromis niloticus 69_1.0 | Nile tilapia | 1 | 1 |
No Yes | Caenorhabditis elegans 69_215 | Roundworm | 1 | 1 |
No Yes | 1_050719N (meta-genome) | | 1 | 1 |
No Yes | 2_050719S (meta-genome) | | 2 | 2 |
No Yes | 3_050719R (meta-genome) | | 1 | 1 |
No Yes | 4_050719Q (meta-genome) | | 3 | 3 |
No Yes | 4_Deep_abyss (meta-genome) | | 1 | 1 |
No Yes | 5_050719P (meta-genome) | | 1 | 1 |
No Yes | 7_Oxygen_minimum_layer (meta-genome) | | 1 | 1 |
No Yes | Air microbial communities Singapore indoor air filters 1 (meta-genome) | | 15 | 15 |
No Yes | Air microbial communities Singapore indoor air filters 2 (meta-genome) | | 9 | 9 |
No Yes | Combined (meta-genome) | | 1 | 1 |
No Yes | Cyphomyrmex longiscapus fungus garden (meta-genome) | | 2 | 2 |
No Yes | Dump bottom (Dump bottom) (meta-genome) | | 14 | 14 |
No Yes | Dump top (Dump top) (meta-genome) | | 10 | 10 |
No Yes | Freshwater propionate enrichment of Brocadia fulgida (meta-genome) | | 1 | 1 |
No Yes | Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) | | 1 | 1 |
No Yes | Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) | | 8 | 8 |
No Yes | Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes | | 1 | 1 |
No Yes | Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) | | 2 | 2 |
No Yes | Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) | | 1 | 1 |
No Yes | Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) | | 1 | 1 |
No Yes | Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) | | 2 | 2 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) | | 1 | 1 |
No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) | | 2 | 2 |
No Yes | Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) | | 8 | 8 |
No Yes | Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) | | 7 | 7 |
No Yes | Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) | | 23 | 23 |
No Yes | Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) | | 8 | 8 |
No Yes | Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) | | 1 | 1 |
No Yes | Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) | | 8 | 8 |
No Yes | Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) | | 6 | 6 |
No Yes | Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) | | 1 | 1 |
No Yes | Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) | | 7 | 7 |
No Yes | Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) | | 3 | 3 |
No Yes | NCBI 2017_08 genome | | 2045 | 2042 |
No Yes | Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) | | 9 | 9 |
No Yes | simHC - Simulated High Complexity Metagenome (meta-genome) | | 4 | 4 |
No Yes | simLC - Simulated Low Complexity Metagenome (meta-genome) | | 2 | 2 |
No Yes | simMC - Simulated Medium Complexity Metagenome (meta-genome) | | 1 | 1 |
No Yes | Sludge/Australian, Phrap Assembly (meta-genome) | | 1 | 1 |
No Yes | Soil microbial communities from Minnesota Farm (meta-genome) | | 7 | 7 |
No Yes | Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) | | 26 | 26 |
No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) | | 23 | 23 |
No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) | | 14 | 14 |
No Yes | Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) | | 8 | 8 |
No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) | | 25 | 25 |
No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) | | 22 | 22 |
No Yes | STRING v9.0.5 (STRING) | | 75 | 75 |
No Yes | Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) | | 3 | 3 |
No Yes | Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) | | 11 | 11 |
No Yes | Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) | | 6 | 6 |
No Yes | Uniprot 2018_03 genome | | 1932 | 1929 |
No Yes | Uranium Contaminated Groundwater FW106 (meta-genome) | | 1 | 1 |
No Yes | Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) | | 3 | 3 |
No Yes | Global Ocean Sampling Expedition (GOS) | | 34 | 34 |
No Yes | NCBI plasmid sequences (Plasmids) | | 1 | 1 |
No Yes | PDB chains (SCOP 1.75) (PDB) | | 3 | 3 |
No Yes | Protein Data Bank (all PDB sequenc) | | 5 | 5 |
No Yes | SCOP2 SCOPe CATH ECOD (all domain sequ) | | 15 | 15 |
No Yes | TargetDB (Targets) | | 1 | 1 |