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  Home > Genomes > Mechanosensitive channel protein MscS (YggB), middle domain domains in all bacterial genomes


Mechanosensitive channel protein MscS (YggB), middle domain family domain assignments
in
all bacterial genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 1 to 25 of 227
  1 2 3 4 5 6 7 8 9 10   Next Last

Photorhabdus asymbiotica has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|253988625|ref|YP_003039981.1|   8.83e-16   0.0000726   114-179   2oau A:113-179  
 
Weak hits:
gi|253991564|ref|YP_003042920.1|   3.27e-16   0.0018   920-985   2oau A:113-179  

Photorhabdus luminescens subsp. laumondii TTO1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|37527483|ref|NP_930827.1|   7.85e-16   0.0000795   114-179   2oau A:113-179  
 
Weak hits:
gi|37528417|ref|NP_931762.1|   4.25e-16   0.0018   920-985   2oau A:113-179  

Xenorhabdus bovienii SS-2004 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|290476427|ref|YP_003469332.1|   3.6e-16   0.0000921   114-179   2oau A:113-179  
 
Weak hits:
gi|290474641|ref|YP_003467521.1|   3.27e-16   0.0014   952-1017   2oau A:113-179  
gi|290477087|ref|YP_003469999.1|   5.23e-16   0.0018   923-988   2oau A:113-179  

Xenorhabdus nematophila ATCC 19061 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|300722091|ref|YP_003711373.1|   2.71e-16   0.0000825   114-179   2oau A:113-179  
 
Weak hits:
gi|300721468|ref|YP_003710743.1|   4.9e-16   0.0016   923-988   2oau A:113-179  
gi|300721966|ref|YP_003711246.1|   3.27e-16   0.0014   951-1016   2oau A:113-179  

Providencia stuartii MRSN 2154 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386742128|ref|YP_006215307.1|   2.16e-16   0.0000825   114-179   2oau A:113-179  
 
Weak hits:
gi|386741798|ref|YP_006214977.1|   0.00000000000392   0.0054   186-252   2oau A:113-179  
gi|386742386|ref|YP_006215565.1|   4.58e-17   0.0011   961-1026   2oau A:113-179  
gi|386742977|ref|YP_006216156.1|   2.13e-17   0.0028   164-230   2oau A:113-179  
gi|386743729|ref|YP_006216908.1|   2.06e-16   0.0018   929-994   2oau A:113-179  
gi|386743744|ref|YP_006216923.1|   0.0000000108   0.0061   178-244   2oau A:113-179  

Edwardsiella ictaluri 93-146 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|238921223|ref|YP_002934738.1|   6.54e-17   0.000049   114-179   2oau A:113-179  
 
Weak hits:
gi|238918966|ref|YP_002932480.1|   0.0000000000154   0.0054   187-252   2oau A:113-179  
gi|238919034|ref|YP_002932548.1|   1.5e-16   0.0013   930-995   2oau A:113-179  
gi|238919721|ref|YP_002933236.1|   1.28e-16   0.0024   159-225   2oau A:113-179  

Edwardsiella tarda EIB202 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|269140297|ref|YP_003296998.1|   6.54e-17   0.000049   114-179   2oau A:113-179  
 
Weak hits:
gi|269137699|ref|YP_003294399.1|   6.54e-16   0.002   923-988   2oau A:113-179  
gi|269137913|ref|YP_003294613.1|   0.00000000000242   0.0015   347-412   2oau A:113-179  
gi|269138310|ref|YP_003295010.1|   0.0000000000327   0.0061   187-252   2oau A:113-179  
gi|269138370|ref|YP_003295070.1|   1.5e-16   0.0013   930-995   2oau A:113-179  
gi|269139222|ref|YP_003295923.1|   3.6e-16   0.0022   159-225   2oau A:113-179  

Rahnella sp. Y9602 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|322834206|ref|YP_004214233.1|   4.25e-17   0.0000457   114-178   2oau A:113-179  
 
Weak hits:
gi|322831146|ref|YP_004211173.1|   2.84e-16   0.002   924-989   2oau A:113-179  
gi|322832662|ref|YP_004212689.1|   0.00000000000000392   0.0014   632-696   2oau A:113-179  
gi|322834011|ref|YP_004214038.1|   1.31e-16   0.0013   938-1003   2oau A:113-179  
gi|322835553|ref|YP_004215579.1|   0.000000000000173   0.0029   186-250   2oau A:113-179  

Rahnella aquatilis CIP 78.65 = ATCC 33071 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|383191402|ref|YP_005201530.1|   4.25e-17   0.0000457   114-178   2oau A:113-179  
 
Weak hits:
gi|379704191|ref|YP_005220565.1|   0.000000000000183   0.0029   186-250   2oau A:113-179  
gi|379704208|ref|YP_005220582.1|   0.0000000000036   0.002   363-427   2oau A:113-179  
gi|383188391|ref|YP_005198519.1|   2.84e-16   0.002   925-990   2oau A:113-179  
gi|383190480|ref|YP_005200608.1|   0.00000000000000392   0.0014   632-696   2oau A:113-179  
gi|383191209|ref|YP_005201337.1|   1.31e-16   0.0013   938-1003   2oau A:113-179  

Yersinia pseudotuberculosis IP 31758 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153949025|ref|YP_001399835.1|   7.52e-17   0.0000517   114-179   2oau A:113-179  
 
Weak hits:
gi|153947362|ref|YP_001400512.1|   0.00000000000281   0.0054   187-252   2oau A:113-179  
gi|153949019|ref|YP_001402618.1|   9.81e-17   0.0019   926-991   2oau A:113-179  
gi|153950012|ref|YP_001402024.1|   1.08e-16   0.0013   920-985   2oau A:113-179  

Yersinia pestis Pestoides F has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|145597901|ref|YP_001161977.1|   7.52e-17   0.0000517   114-179   2oau A:113-179  
 
Weak hits:
gi|145599165|ref|YP_001163241.1|   0.00000000000281   0.0054   187-252   2oau A:113-179  
gi|145600023|ref|YP_001164099.1|   1.08e-16   0.0013   904-969   2oau A:113-179  
gi|145600859|ref|YP_001164935.1|   9.81e-17   0.0019   926-991   2oau A:113-179  

Yersinia enterocolitica subsp. enterocolitica 8081 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|123443601|ref|YP_001007574.1|   7.52e-17   0.0000517   114-179   2oau A:113-179  
 
Weak hits:
gi|123440710|ref|YP_001004702.1|   0.00000000000000304   0.0014   673-737   2oau A:113-179  
gi|123440750|ref|YP_001004742.1|   9.48e-17   0.0019   891-956   2oau A:113-179  
gi|123442129|ref|YP_001006111.1|   1.34e-17   0.003   162-228   2oau A:113-179  
gi|123443306|ref|YP_001007280.1|   4.9e-16   0.0014   905-970   2oau A:113-179  

Serratia sp. AS12 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|333928977|ref|YP_004502556.1|   3.6e-17   0.0000508   114-179   2oau A:113-179  
 
Weak hits:
gi|333925246|ref|YP_004498825.1|   1.31e-17   0.0016   922-987   2oau A:113-179  
gi|333925854|ref|YP_004499433.1|   0.00000000000291   0.0054   187-252   2oau A:113-179  
gi|333925939|ref|YP_004499518.1|   2.26e-16   0.0013   938-1003   2oau A:113-179  
gi|333927376|ref|YP_004500955.1|   0.00000000000000141   0.0013   627-691   2oau A:113-179  

Serratia sp. ATCC 39006 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|541866355|ref|YP_008524347.1|   1.44e-17   0.0000378   114-178   2oau A:113-179  
 
Weak hits:
gi|541864120|ref|YP_008522112.1|   4.58e-16   0.0014   938-1003   2oau A:113-179  
gi|541866442|ref|YP_008524434.1|   5.89e-17   0.002   922-987   2oau A:113-179  

Serratia plymuthica AS9 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|333933930|ref|YP_004507508.1|   3.6e-17   0.0000508   114-179   2oau A:113-179  
 
Weak hits:
gi|333930199|ref|YP_004503777.1|   1.31e-17   0.0016   922-987   2oau A:113-179  
gi|333930807|ref|YP_004504385.1|   0.00000000000291   0.0054   187-252   2oau A:113-179  
gi|333930892|ref|YP_004504470.1|   2.26e-16   0.0013   938-1003   2oau A:113-179  
gi|333932330|ref|YP_004505908.1|   0.00000000000000141   0.0013   627-691   2oau A:113-179  

Serratia proteamaculans 568 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|157372176|ref|YP_001480165.1|   2.58e-16   0.000049   114-179   2oau A:113-179  
 
Weak hits:
gi|157368668|ref|YP_001476657.1|   4.25e-17   0.0018   922-987   2oau A:113-179  
gi|157369291|ref|YP_001477280.1|   0.00000000000621   0.006   187-252   2oau A:113-179  
gi|157369373|ref|YP_001477362.1|   1.57e-16   0.0012   940-1005   2oau A:113-179  
gi|157369719|ref|YP_001477708.1|   0.00000000137   0.0047   560-618   2oau A:113-179  
gi|157370768|ref|YP_001478757.1|   0.00000000000000199   0.0013   637-701   2oau A:113-179  

Dickeya dadantii Ech703 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|242238008|ref|YP_002986189.1|   4.25e-16   0.0000457   114-178   2oau A:113-179  
 
Weak hits:
gi|242237925|ref|YP_002986106.1|   1.21e-16   0.0019   919-984   2oau A:113-179  
gi|242238459|ref|YP_002986640.1|   2.29e-16   0.0013   939-1004   2oau A:113-179  

Dickeya zeae Ech1591 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|251788155|ref|YP_003002876.1|   0.00000000000000193   0.0000555   114-178   2oau A:113-179  
 
Weak hits:
gi|251788032|ref|YP_003002753.1|   1.21e-16   0.0019   922-987   2oau A:113-179  
gi|251788914|ref|YP_003003635.1|   0.00000000000000654   0.0014   633-698   2oau A:113-179  
gi|251790625|ref|YP_003005346.1|   3.27e-16   0.0013   943-1008   2oau A:113-179  

Pectobacterium wasabiae WPP163 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|261823128|ref|YP_003261234.1|   0.00000000000000258   0.0000652   112-176   2oau A:113-179  
 
Weak hits:
gi|261820704|ref|YP_003258810.1|   0.0000000000000101   0.0015   637-702   2oau A:113-179  
gi|261822538|ref|YP_003260644.1|   0.0000000000425   0.0058   191-257   2oau A:113-179  
gi|261823166|ref|YP_003261272.1|   1.21e-16   0.0019   922-987   2oau A:113-179  

Pectobacterium sp. SCC3193 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|470156475|ref|YP_006284977.1|   0.00000000000000258   0.0000652   112-176   2oau A:113-179  
 
Weak hits:
gi|470153757|ref|YP_006282259.1|   0.0000000000000101   0.0015   637-702   2oau A:113-179  
gi|470155736|ref|YP_006284238.1|   0.0000000000425   0.0058   191-257   2oau A:113-179  
gi|470156521|ref|YP_006285023.1|   1.21e-16   0.0019   922-987   2oau A:113-179  

Pectobacterium atrosepticum SCRI1043 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|50122831|ref|YP_051998.1|   2.19e-17   0.0000517   112-176   2oau A:113-179  
 
Weak hits:
gi|50120055|ref|YP_049222.1|   0.0000000000425   0.0058   191-257   2oau A:113-179  
gi|50122041|ref|YP_051208.1|   0.0000000000000101   0.0015   635-700   2oau A:113-179  
gi|50122887|ref|YP_052054.1|   1.21e-16   0.0019   922-987   2oau A:113-179  

Pectobacterium carotovorum subsp. carotovorum PC1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|253690060|ref|YP_003019250.1|   8.5e-17   0.0000555   112-176   2oau A:113-179  
 
Weak hits:
gi|253687409|ref|YP_003016599.1|   0.0000000000425   0.0058   191-257   2oau A:113-179  
gi|253689244|ref|YP_003018434.1|   0.0000000000000101   0.0015   635-700   2oau A:113-179  
gi|253690117|ref|YP_003019307.1|   1.21e-16   0.0019   922-987   2oau A:113-179  

Sodalis glossinidius str. 'morsitans' has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|85059991|ref|YP_455693.1|   5.56e-16   0.0000904   114-179   2oau A:113-179  
 
Weak hits:
gi|85058289|ref|YP_453991.1|   1.77e-16   0.0021   921-986   2oau A:113-179  

Pantoea sp. At-9b has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|317049404|ref|YP_004117052.1|   2.26e-16   0.0000442   114-179   2oau A:113-179  
 
Weak hits:
gi|317047421|ref|YP_004115069.1|   0.00000000000000523   0.0015   640-704   2oau A:113-179  
gi|317047478|ref|YP_004115126.1|   0.00000000199   0.0055   573-631   2oau A:113-179  
gi|317049766|ref|YP_004117414.1|   2.39e-16   0.0021   922-987   2oau A:113-179  
gi|317054193|ref|YP_004118218.1|   0.00000000000157   0.0025   346-411   2oau A:113-179  

Pantoea vagans C9-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|308188022|ref|YP_003932153.1|   2.78e-17   0.0000419   114-179   2oau A:113-179  
 
Weak hits:
gi|308186138|ref|YP_003930269.1|   0.00000000000000719   0.0016   632-696   2oau A:113-179  
gi|308186519|ref|YP_003930650.1|   0.00000000000147   0.0028   185-249   2oau A:113-179  
gi|308186709|ref|YP_003930840.1|   0.0000000000392   0.0053   183-249   2oau A:113-179  
gi|308187367|ref|YP_003931498.1|   0.000000000000392   0.0091   187-251   2oau A:113-179  
gi|308188279|ref|YP_003932410.1|   1.96e-16   0.0021   866-931   2oau A:113-179  

  1 2 3 4 5 6 7 8 9 10   Next Last
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Select to display   Genome       Domains   Proteins
No Yes ALL   22953 22953
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Buchnera aphidicola BCc   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)   1 1
No Yes Buchnera aphidicola (Cinara tujafilina)   1 1
No Yes Buchnera aphidicola str. Bp (Baizongia pistaciae)   1 1
No Yes Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. 5A (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. APS (Acyrthosiphon pisum)   1 1
No Yes Buchnera aphidicola str. Sg (Schizaphis graminum)   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Combined (meta-genome)   7 7
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   8 8
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   2 2
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   7 7
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   13 13
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   11 11
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21428 21428
No Yes STRING v9.0.5 (STRING)   93 93
No Yes Uniprot 2018_03 genome   936 936
No Yes Global Ocean Sampling Expedition (GOS)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   42 42
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   77 77
No Yes TargetDB (Targets)   1 1
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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