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Cysteine-rich DNA binding domain, (DM domain) family domain assignments
in
all eukaryotic genomes

Assignment details

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22 selected genomes have 35 significant domains in 35 proteins.


Danaus plexippus OGS1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
DPGLEAN01441-PA   3.92e-16   0.0000712   30-77   1lpv A:  
 
Weak hits:
DPGLEAN14862-PA   2.35e-18   0.00028   32-80   1lpv A:  
DPGLEAN19995-PA   1.01e-16   0.00046   17-63   1lpv A:  

Heliconius melpomene has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
HMEL009964-PA   3.14e-16   0.0000725   30-77   1lpv A:  
 
Weak hits:
HMEL004517-PA   2.22e-16   0.00044   6-53   1lpv A:  
HMEL014130-PA   9.68e-17   0.00046   19-65   1lpv A:  

Bombyx mori has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
Bmb000485   0.00000000000000112   0.000099   30-76   1lpv A:  
 
Weak hits:
Bmb009414   5.23e-18   0.00028   20-68   1lpv A:  
Bmb010071   5.36e-17   0.00046   17-63   1lpv A:  

Lucilia cuprina has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
KNC31526   1.15e-16   0.000087   27-75   1lpv A:  
 
Weak hits:
KNC27314   0.0000000000000017   0.00036   40-86   1lpv A:  
KNC30628   1.44e-17   0.00028   35-83   1lpv A:  
KNC32593   7.45e-17   0.00052   34-83   1lpv A:  

Drosophila grimshawi 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0156759   9.94e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0148222   1.83e-17   0.00028   35-83   1lpv A:  
FBpp0151607   0.00000000000000327   0.00041   23-69   1lpv A:  
FBpp0152182   2.48e-17   0.00051   35-83   1lpv A:  

Drosophila willistoni 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0243440   1.57e-17   0.0000507   39-86   1lpv A:  
 
Weak hits:
FBpp0241056   1.83e-17   0.00028   35-83   1lpv A:  
FBpp0243324   1.44e-17   0.00051   39-87   1lpv A:  
FBpp0246201   0.00000000000000248   0.00041   20-66   1lpv A:  

Drosophila pseudoobscura 2.13 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0284151   8.5e-17   0.0000507   39-86   1lpv A:  
 
Weak hits:
FBpp0272802   0.00000000000000262   0.00041   13-59   1lpv A:  
FBpp0280990   2.22e-17   0.00051   38-86   1lpv A:  
FBpp0283201   1.7e-17   0.00028   35-83   1lpv A:  

Drosophila persimilis 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0187656   5.89e-17   0.0000507   39-86   1lpv A:  
 
Weak hits:
FBpp0176049   1.83e-17   0.00051   38-86   1lpv A:  
FBpp0178009   1.7e-17   0.00028   35-83   1lpv A:  

Drosophila yakuba 1.3 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0256115   4.71e-17   0.0000481   39-86   1lpv A:  
FBpp0270767   5.89e-18   0.0000426   38-86   1lpv A:  
 
Weak hits:
FBpp0262080   0.00000000000000183   0.00038   19-65   1lpv A:  
FBpp0268879   1.83e-17   0.00028   35-83   1lpv A:  

Drosophila simulans 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0217847   5.36e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0211385   0.0445   0.014   56-74   1lpv A:  
FBpp0217796   2.35e-17   0.00051   37-85   1lpv A:  
FBpp0219853   1.83e-17   0.00028   35-83   1lpv A:  
FBpp0222821   0.000000000131   0.00096   3-34   1lpv A:  

Drosophila sechellia 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0191921   8.63e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0193103   5.62e-16   0.00038   18-64   1lpv A:  
FBpp0194282   1.7e-17   0.00028   35-83   1lpv A:  
FBpp0196539   2.09e-17   0.00051   37-85   1lpv A:  

Drosophila melanogaster 76_5 has 5 significant domains in 5 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0081256   8.63e-17   0.0000481   39-86   1lpv A:  
FBpp0081257   6.15e-17   0.0000481   39-86   1lpv A:  
FBpp0081258   6.15e-17   0.0000481   39-86   1lpv A:  
FBpp0303106   8.63e-17   0.0000481   39-86   1lpv A:  
FBpp0303107   9.15e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0073599   0.00000000000000288   0.00038   118-164   1lpv A:  
FBpp0083410   2.48e-17   0.00051   37-85   1lpv A:  
FBpp0084820   1.83e-17   0.00028   35-83   1lpv A:  

Drosophila erecta 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0143364   6.15e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0130226   1.83e-17   0.00028   35-83   1lpv A:  
FBpp0142878   2.22e-17   0.00051   37-85   1lpv A:  

Drosophila ananassae 1.3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0119754   5.62e-17   0.0000507   39-86   1lpv A:  
 
Weak hits:
FBpp0119686   2.75e-17   0.0005   38-86   1lpv A:  
FBpp0122597   0.0000000000000017   0.00038   15-61   1lpv A:  
FBpp0126553   1.83e-17   0.00028   35-83   1lpv A:  

Drosophila virilis 1.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0225449   1.02e-16   0.0000534   39-86   1lpv A:  
 
Weak hits:
FBpp0225044   1.7e-17   0.00028   35-83   1lpv A:  
FBpp0225320   2.48e-17   0.00051   37-85   1lpv A:  
FBpp0230176   0.00000000000000314   0.00041   19-65   1lpv A:  

Aedes aegypti 55 (Not maintained) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
AAEL009114-PA   5.36e-16   0.0000954   33-80   1lpv A:  
 
Weak hits:
AAEL004696-PA   1.44e-16   0.00052   56-104   1lpv A:  

Culex pipiens quinquefasciatus has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
CPIJ004057|male-specific   6.41e-16   0.0000919   35-82   1lpv A:  
 
Weak hits:
CPIJ014298|conserved   0.00000000000000275   0.00048   10-56   1lpv A:  
CPIJ017325|conserved   0.000876   0.0053   32-53   1lpv A:  
CPIJ020315|conserved   0.00000000000000497   0.00048   10-56   1lpv A:  

Anopheles gambiae 49_3j has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
AGAP004050-PA   4.84e-16   0.0000936   36-83   1lpv A:  
AGAP004050-PB   4.32e-16   0.0000936   36-83   1lpv A:  
AGAP004050-PC   0.00000000000000157   0.0000936   36-83   1lpv A:  
 
Weak hits:
AGAP000431-PA   1.57e-17   0.00028   35-83   1lpv A:  
AGAP001388-PA   1.01e-16   0.0005   8-55   1lpv A:  

Tribolium castaneum 3.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
TC010597   8.37e-16   0.0001   24-71   1lpv A:  
 
Weak hits:
TC002261   1.7e-16   0.00043   7-55   1lpv A:  
TC010058   6.28e-18   0.00028   35-83   1lpv A:  

Drosophila melanogaster FlyBase 5.12 (FlyBase) has 3 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0081256   8.63e-17   0.0000481   39-86   1lpv A:  
FBpp0081257   6.15e-17   0.0000481   39-86   1lpv A:  
FBpp0081258   6.15e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0073599   0.00000000000000288   0.00038   118-164   1lpv A:  
FBpp0076381   0.0262   0.013   57-74   1lpv A:  
FBpp0083410   2.48e-17   0.00051   37-85   1lpv A:  
FBpp0084820   1.83e-17   0.00028   35-83   1lpv A:  

Anopheles gambiae VectorBase AgamP3.6 (VectorBase) has 5 significant domains in 5 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
AGAP004050-PA|hypothetical   5.49e-16   0.0000936   36-83   1lpv A:  
AGAP004050-PB|hypothetical   4.32e-16   0.0000936   36-83   1lpv A:  
AGAP004050-PC|hypothetical   0.00000000000000157   0.0000936   36-83   1lpv A:  
AGAP004050-PD|hypothetical   3.66e-16   0.0000936   36-83   1lpv A:  
AGAP004050-PE|hypothetical   0.00000000000000144   0.0000936   36-83   1lpv A:  
 
Weak hits:
AGAP000431-PA|hypothetical   1.44e-17   0.00028   35-83   1lpv A:  
AGAP001388-PA|hypothetical   1.01e-16   0.0005   8-55   1lpv A:  

Drosophila melanogaster 69_5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
FBpp0081256   8.63e-17   0.0000481   39-86   1lpv A:  
 
Weak hits:
FBpp0073599   0.00000000000000288   0.00038   118-164   1lpv A:  
FBpp0083410   2.48e-17   0.00051   37-85   1lpv A:  
FBpp0084820   1.83e-17   0.00028   35-83   1lpv A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   558 558
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 5 5
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 5 5
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes NCBI 2017_08 genome   181 181
No Yes STRING v9.0.5 (STRING)   12 12
No Yes Uniprot 2018_03 genome   302 302
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3

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