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PUA domain family domain assignments
in
all archaeal genomes

Assignment details

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25 selected genomes have 32 significant domains in 32 proteins.

Showing genomes 1 to 25 of 28
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Aeropyrum pernix K1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|118431091|ref|NP_147299.2|   1.16e-19   0.0000145   83-169   2cx1 A:91-183  
 
Weak hits:
gi|118431292|ref|NP_147652.2|   5.25e-19   0.00046   261-343   2ey4 A:253-336  
gi|14601183|ref|NP_147715.1|   0.00000000000000746   0.013   93-163   1iq8 A:506-582  
gi|14601786|ref|NP_148327.1|   0.0000000000429   0.0063   79-145   1iq8 A:506-582  

Archaeoglobus fulgidus DSM 4304 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|11498195|ref|NP_069421.1|   0.000000000000087   0.0000938   465-525   2q07 A:460-527  
 
Weak hits:
gi|11497678|ref|NP_068899.1|   0.00000000000193   0.014   88-162   1t5y A:95-170  
gi|11497854|ref|NP_069076.1|   7.73e-22   0.0003   236-318   2apo A:247-331  
gi|11498315|ref|NP_069542.1|   3.7e-22   0.0012   77-152   1iq8 A:506-582  
gi|11499000|ref|NP_070234.1|   1.99e-21   0.0067   71-150   1q7h A:69-153  

Thermococcus sp. 4557 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|341581475|ref|YP_004761967.1|   8.29e-21   0.0000988   504-578   1iq8 A:506-582  
gi|341582033|ref|YP_004762525.1|   4.48e-23   0.0000332   249-332   2ey4 A:253-336  
 
Weak hits:
gi|341581123|ref|YP_004761615.1|   3.09e-17   0.0089   133-204   1q7h A:69-153  
gi|341582537|ref|YP_004763029.1|   3.15e-16   0.018   89-160   1q7h A:69-153  
gi|341582673|ref|YP_004763165.1|   0.00000000000464   0.009   511-566   2q07 A:460-527  
gi|341582958|ref|YP_004763450.1|   3.98e-23   0.0052   88-169   1q7h A:69-153  

Thermococcus onnurineus NA1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|212223242|ref|YP_002306478.1|   3.54e-23   0.0000305   249-332   2ey4 A:253-336  
 
Weak hits:
gi|212223765|ref|YP_002307001.1|   4.53e-21   0.00016   504-578   1iq8 A:506-582  
gi|212224106|ref|YP_002307342.1|   0.00000000000000486   0.0084   133-204   1q7h A:69-153  
gi|212224401|ref|YP_002307637.1|   2.38e-24   0.0054   87-169   1q7h A:69-153  
gi|212224656|ref|YP_002307892.1|   0.000000000000392   0.0058   512-566   2q07 A:460-527  
gi|212224781|ref|YP_002308017.1|   1.1e-16   0.018   89-160   2q07 A:460-527  

Thermococcus kodakarensis KOD1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|57641444|ref|YP_183922.1|   8.29e-23   0.0000241   249-332   2ey4 A:253-336  
 
Weak hits:
gi|57640695|ref|YP_183173.1|   3.15e-20   0.00017   504-578   1iq8 A:506-582  
gi|57641250|ref|YP_183728.1|   1.88e-18   0.02   132-204   1q7h A:69-153  
gi|57642057|ref|YP_184535.1|   4.03e-18   0.017   89-160   2apo A:247-331  
gi|57642091|ref|YP_184569.1|   0.000000000000336   0.0044   511-567   2q07 A:460-527  
gi|57642210|ref|YP_184688.1|   1.99e-23   0.0025   88-169   1q7h A:69-153  

Thermococcus gammatolerans EJ3 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|240103198|ref|YP_002959507.1|   3.65e-21   0.0001   507-582   1iq8 A:506-582  
gi|240104029|ref|YP_002960338.1|   5.19e-23   0.0000258   249-332   2ey4 A:253-336  
 
Weak hits:
gi|240102348|ref|YP_002958656.1|   6.63e-17   0.0096   95-166   1q7h A:69-153  
gi|240102569|ref|YP_002958878.1|   9.94e-18   0.013   135-207   1q7h A:69-153  
gi|240103902|ref|YP_002960211.1|   8.84e-23   0.0034   88-169   1q7h A:69-153  
gi|240104179|ref|YP_002960488.1|   0.000000000000236   0.0035   512-566   2q07 A:460-527  

Thermococcus sibiricus MM 739 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|242398328|ref|YP_002993752.1|   3.37e-23   0.0000332   254-337   2ey4 A:253-336  
 
Weak hits:
gi|242398086|ref|YP_002993510.1|   1.55e-19   0.00012   508-582   1iq8 A:506-582  
gi|242399075|ref|YP_002994499.1|   0.00000000000000409   0.029   131-204   1q7h A:69-153  
gi|242399310|ref|YP_002994734.1|   1.93e-23   0.002   85-167   1q7h A:69-153  
gi|242399806|ref|YP_002995231.1|   0.0000000000028   0.0053   515-569   2q07 A:460-527  
gi|242399817|ref|YP_002995242.1|   1.1e-17   0.0079   88-159   2apo A:247-331  

Thermococcus barophilus MP has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|315229889|ref|YP_004070325.1|   1.44e-23   0.0000195   249-332   2ey4 A:253-336  
 
Weak hits:
gi|315230677|ref|YP_004071113.1|   3.87e-21   0.00011   502-576   1iq8 A:506-582  
gi|315230976|ref|YP_004071412.1|   1.38e-16   0.019   133-207   1q7h A:69-153  
gi|315231051|ref|YP_004071487.1|   1.27e-25   0.0033   86-168   1q7h A:69-153  
gi|315231554|ref|YP_004071990.1|   0.0000000000000808   0.0033   513-567   2q07 A:460-527  
gi|315231566|ref|YP_004072002.1|   2.38e-17   0.017   89-159   2apo A:247-331  

Pyrococcus sp. ST04 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|389852585|ref|YP_006354819.1|   8.29e-22   0.0000594   453-527   1iq8 A:506-582  
gi|389852948|ref|YP_006355182.1|   1.27e-23   0.0000179   249-332   2ey4 A:253-336  
 
Weak hits:
gi|389851633|ref|YP_006353867.1|   1.55e-17   0.017   128-200   1q7h A:69-153  
gi|389851670|ref|YP_006353904.1|   0.000000000000149   0.0065   510-565   2q07 A:460-527  
gi|389851763|ref|YP_006353997.1|   6.08e-18   0.011   89-160   2ey4 A:253-336  
gi|389852175|ref|YP_006354409.1|   3.2e-24   0.0018   88-168   1q7h A:69-153  

Pyrococcus yayanosii CH1 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|337283743|ref|YP_004623217.1|   1.1e-23   0.0000185   248-331   2ey4 A:253-336  
gi|337284096|ref|YP_004623570.1|   6.08e-21   0.0000884   502-576   1iq8 A:506-582  
 
Weak hits:
gi|337283790|ref|YP_004623264.1|   9.39e-24   0.0016   88-169   1q7h A:69-153  
gi|337285025|ref|YP_004624499.1|   7.73e-18   0.02   88-159   2ey4 A:253-336  
gi|337285072|ref|YP_004624546.1|   0.0000000000000227   0.0058   511-566   2q07 A:460-527  
gi|337285151|ref|YP_004624625.1|   0.00000000000000387   0.017   133-208   1q7h A:69-153  

Pyrococcus horikoshii OT3 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|14590946|ref|NP_143020.1|   1.23e-21   0.0000414   507-581   1iq8 A:506-582  
gi|14591414|ref|NP_143494.1|   1.77e-23   0.0000281   249-332   2ey4 A:253-336  
 
Weak hits:
gi|14590078|ref|NP_142142.1|   0.0000000000000144   0.0043   511-567   2q07 A:460-527  
gi|14590194|ref|NP_142259.1|   1.16e-16   0.018   134-207   1q7h A:69-153  
gi|14590609|ref|NP_142677.1|   9.94e-24   0.0015   91-171   1q7h A:69-153  
gi|14591725|ref|NP_143813.1|   1.16e-17   0.016   92-163   1q7h A:69-153  

Pyrococcus abyssi GE5 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|14521321|ref|NP_126796.1|   4.14e-22   0.0000403   507-581   1iq8 A:506-582  
 
Weak hits:
gi|14520350|ref|NP_125825.1|   0.0000000000000884   0.0046   510-565   2q07 A:460-527  
gi|14520463|ref|NP_125938.1|   1.77e-16   0.014   134-207   1q7h A:69-153  
gi|14521517|ref|NP_126993.1|   6.08e-24   0.0014   88-168   1q7h A:69-153  
gi|14521973|ref|NP_127450.1|   4.03e-17   0.017   89-160   2ey4 A:253-336  

Pyrococcus furiosus COM1 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|397651553|ref|YP_006492134.1|   5.03e-21   0.0000594   501-575   1iq8 A:506-582  
 
Weak hits:
gi|397651617|ref|YP_006492198.1|   1.05e-24   0.0018   88-168   1q7h A:69-153  
gi|397652118|ref|YP_006492699.1|   2.1e-16   0.014   89-160   2ey4 A:253-336  
gi|397652214|ref|YP_006492795.1|   0.0000000000000547   0.0036   511-566   2q07 A:460-527  
gi|397652400|ref|YP_006492981.1|   1.6e-16   0.026   135-206   1q7h A:69-153  
gi|397652567|ref|YP_006493148.1|   2.21e-23   0.015   251-316   2ey4 A:253-336  

Thermoplasma acidophilum DSM 1728 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|16082395|ref|NP_394877.1|   4.33e-23   0.0000192   70-150   1q7h A:69-153  
 
Weak hits:
gi|16081972|ref|NP_394382.1|   0.0000000000000932   0.0079   450-510   2q07 A:460-527  
gi|16082455|ref|NP_394944.1|   4.35e-16   0.0014   553-625   1iq8 A:506-582  
gi|161760539|ref|NP_394700.2|   0.00000000000000994   0.018   209-270   2ey4 A:253-336  

Methanotorris igneus Kol 5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|333911253|ref|YP_004484986.1|   3.31e-23   0.0000424   249-332   2apo A:247-331  
 
Weak hits:
gi|333909904|ref|YP_004483637.1|   0.0000000000000939   0.0029   123-201   2apo A:247-331  
gi|333910495|ref|YP_004484228.1|   2.76e-20   0.00028   572-647   1iq8 A:506-582  
gi|333910646|ref|YP_004484379.1|   0.00000000000000553   0.0038   475-537   2q07 A:460-527  
gi|333910988|ref|YP_004484721.1|   0.00522   0.067   100-144   1iq8 A:506-582  
gi|333911164|ref|YP_004484897.1|   5.25e-25   0.004   79-159   1q7h A:69-153  

Methanocaldococcus sp. FS406-22 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|289191620|ref|YP_003457561.1|   1.1e-24   0.0000148   247-330   2apo A:247-331  
 
Weak hits:
gi|289191927|ref|YP_003457868.1|   0.00000000000000503   0.015   125-203   2q07 A:460-527  
gi|289192104|ref|YP_003458045.1|   1.88e-25   0.0025   89-170   1q7h A:69-153  
gi|289193101|ref|YP_003459042.1|   0.000000000000273   0.0079   472-535   2q07 A:460-527  
gi|289193169|ref|YP_003459110.1|   2.38e-20   0.00026   577-652   1iq8 A:506-582  

Methanocaldococcus fervens AG86 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|256810175|ref|YP_003127544.1|   2.82e-24   0.0000219   239-322   2apo A:247-331  
 
Weak hits:
gi|256810049|ref|YP_003127418.1|   0.000785   0.071   96-140   1iq8 A:506-582  
gi|256810374|ref|YP_003127743.1|   0.00000000000000144   0.013   126-204   1q7h A:69-153  
gi|256810582|ref|YP_003127951.1|   0.0000000000000249   0.0072   470-533   2q07 A:460-527  
gi|256810929|ref|YP_003128298.1|   1.77e-19   0.00033   577-652   1iq8 A:506-582  
gi|256811328|ref|YP_003128697.1|   2.27e-26   0.0018   79-160   1q7h A:69-153  

Methanocaldococcus vulcanius M7 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|261403018|ref|YP_003247242.1|   7.73e-23   0.0000395   242-325   2apo A:247-331  
 
Weak hits:
gi|261402178|ref|YP_003246402.1|   0.00000000000773   0.015   125-200   1iq8 A:506-582  
gi|261402303|ref|YP_003246527.1|   1.22e-19   0.00034   574-649   1iq8 A:506-582  
gi|261402735|ref|YP_003246959.1|   0.0000000000000808   0.0072   480-544   2q07 A:460-527  
gi|261403015|ref|YP_003247239.1|   2.93e-25   0.0028   79-160   1q7h A:69-153  

methanocaldococcus infernus ME has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|296109351|ref|YP_003616300.1|   4.64e-24   0.0000804   231-314   2apo A:247-331  
 
Weak hits:
gi|296108808|ref|YP_003615757.1|   0.0000675   0.071   90-139   1iq8 A:506-582  
gi|296109121|ref|YP_003616070.1|   0.00000000000436   0.03   122-196   2ey4 A:253-336  
gi|296109543|ref|YP_003616492.1|   2.6e-21   0.00039   567-642   1iq8 A:506-582  
gi|296109550|ref|YP_003616499.1|   0.00000000000168   0.0079   444-506   2q07 A:460-527  
gi|296109684|ref|YP_003616633.1|   8.84e-25   0.0025   72-152   1q7h A:69-153  

Methanocaldococcus jannaschii DSM 2661 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|15668320|ref|NP_247116.1|   1.33e-24   0.0000146   247-330   2apo A:247-331  
 
Weak hits:
gi|15668237|ref|NP_247030.1|   8.84e-16   0.013   131-209   2q07 A:460-527  
gi|15668612|ref|NP_247410.1|   7.18e-20   0.00028   471-545   1iq8 A:506-582  
gi|15669211|ref|NP_248016.1|   0.0000000000000932   0.007   505-567   2q07 A:460-527  
gi|15669600|ref|NP_248413.1|   0.000911   0.039   96-140   1iq8 A:506-582  
gi|15669623|ref|NP_248436.1|   1.33e-25   0.0024   79-160   1q7h A:69-153  

Methanothermococcus okinawensis IH1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|336121792|ref|YP_004576567.1|   3.26e-17   0.0000911   232-317   2apo A:247-331  
 
Weak hits:
gi|336121004|ref|YP_004575779.1|   0.00000000000000155   0.0046   505-569   2q07 A:460-527  
gi|336121701|ref|YP_004576476.1|   0.0000405   0.031   111-155   1iq8 A:506-582  
gi|336121730|ref|YP_004576505.1|   0.00000000000232   0.0081   134-215   2apo A:247-331  
gi|336122134|ref|YP_004576909.1|   2.87e-25   0.0045   76-157   1q7h A:69-153  
gi|336122474|ref|YP_004577249.1|   4.97e-19   0.00045   583-656   1iq8 A:506-582  

Methanococcus vannielii SB has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|150399736|ref|YP_001323503.1|   3.26e-20   0.0001   235-317   2apo A:247-331  
 
Weak hits:
gi|150399002|ref|YP_001322769.1|   0.0000000000994   0.011   127-209   1q7h A:69-153  
gi|150399657|ref|YP_001323424.1|   9.32e-17   0.0035   474-539   2q07 A:460-527  
gi|150399815|ref|YP_001323582.1|   4.86e-22   0.0025   78-158   1q7h A:69-153  
gi|150400221|ref|YP_001323988.1|   9.39e-18   0.00048   571-645   1iq8 A:506-582  

Aeropyrum camini SY1 = JCM 12091 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|549455047|ref|YP_008603806.1|   1.22e-19   0.0000266   83-170   2cx1 A:91-183  
 
Weak hits:
gi|549455298|ref|YP_008604057.1|   1.38e-18   0.00058   160-243   2ey4 A:253-336  
gi|549455353|ref|YP_008604112.1|   0.00000000000000884   0.014   93-163   1q7h A:69-153  
gi|549455912|ref|YP_008604671.1|   0.000000000168   0.0084   84-150   1iq8 A:506-582  

Thermococcus sp. AM4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|223477864|ref|YP_002582357.1|   7.18e-23   0.0000281   249-332   2ey4 A:253-336  
 
Weak hits:
gi|223477198|ref|YP_002581663.1|   4.42e-21   0.00011   503-577   1iq8 A:506-582  
gi|223477542|ref|YP_002581976.1|   7.18e-17   0.011   95-166   1q7h A:69-153  
gi|223477677|ref|YP_002582399.1|   1.6e-23   0.0033   88-169   1q7h A:69-153  
gi|223477826|ref|YP_002582111.1|   0.00000000000174   0.0039   512-566   2q07 A:460-527  
gi|223478509|ref|YP_002582934.1|   4.64e-18   0.013   133-204   1q7h A:69-153  

Thermococcus sp. CL1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|390960764|ref|YP_006424598.1|   2.87e-23   0.0000321   249-332   2ey4 A:253-336  
 
Weak hits:
gi|390960226|ref|YP_006424060.1|   7.73e-21   0.00013   504-578   1iq8 A:506-582  
gi|390961110|ref|YP_006424944.1|   0.00905   0.063   97-146   1k8w A:251-312  
gi|390961255|ref|YP_006425089.1|   9.94e-17   0.021   91-162   2q07 A:460-527  
gi|390961374|ref|YP_006425208.1|   0.000000000000359   0.0079   511-566   2q07 A:460-527  
gi|390961630|ref|YP_006425464.1|   3.98e-23   0.0048   88-169   1q7h A:69-153  
gi|390961892|ref|YP_006425726.1|   1.27e-16   0.0061   132-204   1q7h A:69-153  

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Select to display   Genome       Domains   Proteins
No Yes ALL   25304 25304
No Yes Homo sapiens 76_38 Human 1 1
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 1 1
No Yes Mus musculus 76_38 House mouse 1 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 3 3
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1 1
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 1 1
No Yes Xenopus laevis African clawed frog 3 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 1 1
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 2 2
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1 1
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Adineta vaga   1 1
No Yes Octopus bimaculoides 280   1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 1 1
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   2 2
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Hymenolepis microstoma   2 2
No Yes Taenia solium Pork tapeworm 1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   1 1
No Yes Hydnomerulius pinastri v2.0   1 1
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   1 1
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   1 1
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Catenaria anguillulae PL171 v1.0   2 2
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   3 3
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 3 3
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Malus domestica v196 Apple 2 2
No Yes Prunus persica v139 Peach 2 2
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 1 1
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Albugo laibachii 22   2 2
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Naegleria gruberi   2 2
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Thermotoga sp. RQ2   1 1
No Yes Thermotoga naphthophila RKU-10   1 1
No Yes Thermotoga petrophila RKU-1   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Aeropyrum pernix K1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Thermococcus sp. 4557   2 2
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   2 2
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus sp. ST04   2 2
No Yes Pyrococcus yayanosii CH1   2 2
No Yes Pyrococcus horikoshii OT3   2 2
No Yes Pyrococcus abyssi GE5   2 2
No Yes Pyrococcus furiosus COM1   2 2
No Yes Thermoplasma acidophilum DSM 1728   1 1
No Yes Methanotorris igneus Kol 5   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Methanocaldococcus fervens AG86   1 1
No Yes Methanocaldococcus vulcanius M7   1 1
No Yes methanocaldococcus infernus ME   1 1
No Yes Methanocaldococcus jannaschii DSM 2661   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Methanococcus vannielii SB   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3 3
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Mycobacterium yongonense 05-1390   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Thermotoga maritima MSB8   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Aeropyrum camini SY1 = JCM 12091   1 1
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   2 2
No Yes Pyrococcus furiosus DSM 3638   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1 1
No Yes Homo sapiens (NCBI version) Human 1 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1 1
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Malus x domestica (Duplicate) Apple 2 2
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   2 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   2 2
No Yes Combined (meta-genome)   2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   22803 22803
No Yes STRING v9.0.5 (STRING)   157 157
No Yes Uniprot 2018_03 genome   1305 1305
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   19 19
No Yes Protein Data Bank (all PDB sequenc)   27 27
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   111 111
No Yes TargetDB (Targets)   26 26
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

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