SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Doublecortin (DC) superfamily domain assignments
in
NCBI viral sequences


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a Doublecortin (DC) domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   21451 21451
No Yes Homo sapiens 76_38 Human 54 27
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 22 13
No Yes Gorilla gorilla 76_3.1 Western gorilla 25 14
No Yes Pongo abelii 76_2 Sumatran orangutan 18 10
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 28 15
No Yes Papio anubis 76 Olive baboon 22 10
No Yes Macaca mulatta 76_1 Rhesus monkey 33 19
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 40 25
No Yes Otolemur garnettii 76_3 Small-eared galago 17 9
No Yes Microcebus murinus 76_1 Gray mouse lemur 17 9
No Yes Rattus norvegicus 76_5.0 Norway rat 23 12
No Yes Mus musculus 76_38 House mouse 33 19
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 14 8
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 20 12
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 14 8
No Yes Cavia porcellus 76_3 Domestic guinea pig 13 7
No Yes Oryctolagus cuniculus 76_2 Rabbit 21 10
No Yes Ochotona princeps 76 American pika 10 6
No Yes Tupaia belangeri 76 Northern tree shrew 13 8
No Yes Sus scrofa 76_10.2 Pig 33 20
No Yes Bos taurus 76_3.1 Cattle 29 16
No Yes Ovis aries 76_3.1 Sheep 19 12
No Yes Vicugna pacos 76_1 Alpaca 11 8
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 18 10
No Yes Mustela putorius furo 76_1.0 Domestic ferret 22 10
No Yes Ailuropoda melanoleuca 76_1 Giant panda 21 12
No Yes Canis familiaris 76_3.1 Dog 33 19
No Yes Felis catus 76_6.2 Domestic cat 18 11
No Yes Equus caballus 76_2 Horse 20 11
No Yes Myotis lucifugus 76_2.0 Little brown bat 18 10
No Yes Pteropus vampyrus 76_1 Large flying fox 15 9
No Yes Sorex araneus 76_1 European shrew 10 8
No Yes Erinaceus europaeus 76 Western European hedgehog 13 8
No Yes Procavia capensis 76_1 Cape rock hyrax 14 8
No Yes Loxodonta africana 76_3 African savanna elephant 16 10
No Yes Echinops telfairi 76 Small Madagascar hedgehog 12 8
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 30 16
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 5
No Yes Macropus eugenii 76_1.0 Tammar wallaby 12 7
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 24 13
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 15 9
No Yes Ornithorhynchus anatinus 76_5 Platypus 20 13
No Yes Saccoglossus kowalevskii v3.0   49 18
No Yes Petromyzon marinus 76_7.0 Sea lamprey 10 5
No Yes Meleagris gallopavo 76_2 Turkey 16 9
No Yes Gallus gallus 76_4 Chicken 14 8
No Yes Anas platyrhynchos 76_1.0 Mallard 15 9
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 13 7
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 13 8
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 23 14
No Yes Anolis carolinensis 76_2.0 Green anole 17 11
No Yes Xenopus laevis African clawed frog 8 4
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 15 8
No Yes Latimeria chalumnae 76_1 Coelacanth 21 12
No Yes Lepisosteus oculatus 76 Spotted gar 26 15
No Yes Gadus morhua 76_1 Atlantic cod 19 12
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 22 12
No Yes Takifugu rubripes 76_4 Torafugu 36 19
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 19 11
No Yes Oryzias latipes 76_1 Japanese medaka 19 12
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 23 12
No Yes Poecilia formosa 76 Amazon molly 25 14
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 27 14
No Yes Astyanax mexicanus 76 Mexican tetra 17 10
No Yes Danio rerio 76_9 Zebrafish 38 23
No Yes Oikopleura dioica   9 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 6 5
No Yes Ciona intestinalis 76 Vase tunicate 6 4
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 12 6
No Yes Adineta vaga   15 7
No Yes Octopus bimaculoides 280   13 8
No Yes Crassostrea gigas 22 Pacific oyster 18 11
No Yes Lottia gigantea Owl limpet 11 5
No Yes Helobdella robusta   16 11
No Yes Capitella sp. I   14 8
No Yes Danaus plexippus OGS1.0 Monarch butterfly 5 3
No Yes Heliconius melpomene Postman butterfly 4 3
No Yes Bombyx mori Domestic silkworm 3 2
No Yes Nasonia vitripennis Jewel wasp 5 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 4 2
No Yes Linepithema humile v1.1 Argentine ant 5 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 4 3
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 1
No Yes Atta cephalotes v1.1   5 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 3
No Yes Lucilia cuprina Australian sheep blowfly 4 3
No Yes Drosophila grimshawi 1.3   3 3
No Yes Drosophila willistoni 1.3   5 4
No Yes Drosophila pseudoobscura 2.13   5 4
No Yes Drosophila persimilis 1.3   5 4
No Yes Drosophila suzukii   5 4
No Yes Drosophila yakuba 1.3   5 4
No Yes Drosophila simulans 1.3   5 4
No Yes Drosophila sechellia 1.3   5 4
No Yes Drosophila melanogaster 76_5 Fruit fly 13 9
No Yes Drosophila erecta 1.3   5 4
No Yes Drosophila ananassae 1.3   6 5
No Yes Drosophila virilis 1.2   5 4
No Yes Drosophila mojavensis 1.3   5 4
No Yes Megaselia scalaris 22   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 6 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 4
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 2
No Yes Tribolium castaneum 3.0 Red flour beetle 5 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 4
No Yes Acyrthosiphon pisum Pea aphid 4 2
No Yes Rhodnius prolixus 22   5 3
No Yes Daphnia pulex Common water flea 2 1
No Yes Strigamia maritima 22   7 4
No Yes Sarcoptes scabiei   3 2
No Yes Tetranychus urticae Two-spotted spider mite 5 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 3
No Yes Pristionchus pacificus   7 6
No Yes Meloidogyne incognita Southern root-knot nematode 5 5
No Yes Meloidogyne hapla   5 4
No Yes Onchocerca volvulus 22   6 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 7 4
No Yes Caenorhabditis japonica   7 6
No Yes Caenorhabditis brenneri   11 9
No Yes Caenorhabditis remanei   8 7
No Yes Caenorhabditis elegans 76_235 Roundworm 9 8
No Yes Caenorhabditis briggsae 2   8 6
No Yes Trichinella spiralis 22   3 2
No Yes Echinococcus multilocularis   2 1
No Yes Echinococcus granulosus   2 1
No Yes Taenia solium Pork tapeworm 2 1
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 4 2
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   9 6
No Yes Nematostella vectensis 1.0 Starlet sea anemone 12 7
No Yes Hydra vulgaris   12 8
No Yes Amphimedon queenslandica   2 1
No Yes Trichoplax adhaerens   5 4
No Yes Proterospongia sp. ATCC 50818   17 9
No Yes Monosiga brevicollis   12 7
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Catenaria anguillulae PL171 v1.0   2 1
No Yes Allomyces macrogynus ATCC 38327   6 3
No Yes Spizellomyces punctatus DAOM BR117   4 2
No Yes Dictyostelium discoideum   3 2
No Yes Dictyostelium purpureum   3 2
No Yes Thecamonas trahens ATCC 50062   20 9
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Cyanophora paradoxa   2 2
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 1
No Yes Trypanosoma vivax   2 1
No Yes Trypanosoma cruzi strain CL Brener   3 2
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   2 1
No Yes Trypanosoma brucei TREU927 v4.1   2 1
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   2 2
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   2 2
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Perkinsus marinus ATCC 50983   4 4
No Yes Paramecium tetraurelia   2 2
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   2 2
No Yes Babesia bovis T2Bo   2 2
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Trichomonas vaginalis   4 4
No Yes Emiliania huxleyi CCMP1516   4 4
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 11 6
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 10 7
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 4 2
No Yes Ascaris suum Victoria/Ghent Pig roundworm 5 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 9 8
No Yes Batrachochytrium dendrobatidis JEL423   3 1
No Yes Batrachochytrium dendrobatidis JAM81   2 1
No Yes Trypanosoma brucei Lister 427 v4.1   2 1
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 55 29
No Yes Homo sapiens (NCBI version) Human 36 18
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 19 11
No Yes Loa loa v3.3 (Request) Eye worm 6 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 5 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 3
No Yes Homo sapiens 69_37 Human 22 11
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 21 12
No Yes Gorilla gorilla 69_3.1 Western gorilla 19 10
No Yes Pongo abelii 69_2 Sumatran orangutan 18 10
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 24 13
No Yes Macaca mulatta 69_1 Rhesus monkey 19 11
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 20 12
No Yes Otolemur garnettii 69_3 Small-eared galago 17 9
No Yes Microcebus murinus 69_1 Gray mouse lemur 17 9
No Yes Rattus norvegicus 69_3.4 Norway rat 16 9
No Yes Mus musculus 69_38 House mouse 20 11
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 14 8
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 20 12
No Yes Cavia porcellus 69_3 Domestic guinea pig 13 7
No Yes Oryctolagus cuniculus 69_2 Rabbit 20 11
No Yes Ochotona princeps 69 American pika 10 6
No Yes Tupaia belangeri 69 Northern tree shrew 13 8
No Yes Sus scrofa 69_10.2 Pig 20 12
No Yes Bos taurus 69_3.1 Cattle 19 11
No Yes Vicugna pacos 69_1 Alpaca 11 8
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 18 10
No Yes Mustela putorius furo 69_1.0 Domestic ferret 22 10
No Yes Ailuropoda melanoleuca 69_1 Giant panda 19 11
No Yes Canis familiaris 69_3.1 Dog 19 10
No Yes Felis catus 69 Domestic cat 14 8
No Yes Equus caballus 69_2 Horse 18 10
No Yes Myotis lucifugus 69_2.0 Little brown bat 16 8
No Yes Pteropus vampyrus 69_1 Large flying fox 15 9
No Yes Sorex araneus 69_1 European shrew 10 8
No Yes Erinaceus europaeus 69 Western European hedgehog 13 8
No Yes Procavia capensis 69_1 Cape rock hyrax 14 8
No Yes Loxodonta africana 69_3 African savanna elephant 15 9
No Yes Echinops telfairi 69 Small Madagascar hedgehog 12 8
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 14 8
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 5
No Yes Macropus eugenii 69_1.0 Tammar wallaby 12 7
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 14 8
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 15 9
No Yes Ornithorhynchus anatinus 69_5 Platypus 18 12
No Yes Petromyzon marinus 69_7.0 Sea lamprey 10 5
No Yes Meleagris gallopavo 69_2 Turkey 13 7
No Yes Gallus gallus 69_2 Chicken 15 9
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 13 7
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 20 12
No Yes Anolis carolinensis 69_2.0 Green anole 17 11
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 13 7
No Yes Latimeria chalumnae 69_1 Coelacanth 19 10
No Yes Gadus morhua 69_1 Atlantic cod 19 12
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 21 11
No Yes Takifugu rubripes 69_4 Torafugu 17 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 17 10
No Yes Oryzias latipes 69_1 Japanese medaka 15 10
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 23 12
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 19 10
No Yes Danio rerio 69_9 Zebrafish 20 12
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 69 Vase tunicate 6 4
No Yes Drosophila melanogaster 69_5 Fruit fly 5 3
No Yes Caenorhabditis elegans 69_215 Roundworm 8 7
No Yes NCBI 2017_08 genome   10779 5727
No Yes Protozoadb 2010_08 (Protozoadb)   39 35
No Yes STRING v9.0.5 (STRING)   628 389
No Yes Uniprot 2018_03 genome   5336 3200
No Yes Global Ocean Sampling Expedition (GOS)   4 3
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   29 28
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   45 45
No Yes TargetDB (Targets)   26 20

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]