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Somatomedin B domain family domain assignments
in
Homo sapiens 76_38

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Homo sapiens 76_38 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSP00000226218   0.0000000000183   0.0000471   21-67   1ssu A:  
ENSP00000440439   0.00000000000157   0.0000471   21-67   1ssu A:  
 
Weak hits:
ENSP00000075322   0.0000000527   0.0017   57-103   1ssu A:  
  0.000000278   0.0028   105-145   1ssu A:  
ENSP00000229003   0.000000000366   0.0018   47-86   1ssu A:  
ENSP00000259486   0.0000000562   0.0017   57-103   1ssu A:  
  0.000000301   0.0028   105-145   1ssu A:  
ENSP00000259782   0.000432   0.0045   75-109   1ssu A:  
ENSP00000297354   0.000000432   0.0047   35-76   1ssu A:  
ENSP00000350265   0.000000034   0.0031   51-99   1ssu A:  
  0.000000157   0.0047   101-141   1ssu A:  
ENSP00000350964   0.0000000235   0.0031   51-99   1ssu A:  
  0.00000011   0.0047   101-141   1ssu A:  
ENSP00000351075   0.0000000235   0.0028   28-70   1ssu A:  
ENSP00000354238   0.00000000523   0.002   105-150   1ssu A:  
  0.00000085   0.0054   151-191   1ssu A:  
ENSP00000356452   0.000000000445   0.0011   27-66   1ssu A:  
ENSP00000356453   0.000000000432   0.0011   27-67   1ssu A:  
ENSP00000356455   0.00000000301   0.0011   68-107   1ssu A:  
  0.0000000111   0.0012   27-67   1ssu A:  
ENSP00000359901   0.00017   0.0045   59-91   1ssu A:  
ENSP00000359906   0.00017   0.0045   73-105   1ssu A:  
ENSP00000397679   0.0000000000209   0.0011   21-63   1ssu A:  
  0.000000000432   0.0018   88-127   1ssu A:  
ENSP00000399679   0.00000000248   0.0011   68-108   1ssu A:  
  0.0000000123   0.0012   27-67   1ssu A:  
ENSP00000403315   0.0000000536   0.0017   53-99   1ssu A:  
  0.000000288   0.0028   101-141   1ssu A:  
ENSP00000406261   0.000000034   0.0031   51-99   1ssu A:  
  0.000000157   0.0047   101-141   1ssu A:  
ENSP00000422424   0.00000000157   0.002   105-150   1ssu A:  
  0.000000353   0.0054   151-192   1ssu A:  
ENSP00000428291   0.0000000536   0.0017   57-103   1ssu A:  
  0.000000288   0.0028   105-145   1ssu A:  
ENSP00000428304   0.000000068   0.0028   87-128   1ssu A:  
ENSP00000429447   0.00000000471   0.0017   57-103   1ssu A:  
  0.0000000353   0.0028   105-146   1ssu A:  
ENSP00000431330   0.00000000000811   0.0011   27-70   1ssu A:  
ENSP00000445004   0.00000000034   0.0018   25-64   1ssu A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   329 329
No Yes Homo sapiens 76_38 Human 2 2
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 1 1
No Yes Mus musculus 76_38 House mouse 1 1
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 4 4
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 4 4
No Yes Homo sapiens (NCBI version) Human 1 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1 1
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 1 1
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 2 2
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes NCBI 2017_08 genome   115 115
No Yes STRING v9.0.5 (STRING)   14 14
No Yes Uniprot 2018_03 genome   70 70
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6

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