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Notch domain superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 71 significant domains in 42 proteins.

Showing genomes 126 to 150 of 218
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Taenia solium has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
TsM_001107200;OldName=snap_44122   0.00000248   514-541   Notch domain  
  0.000123   448-479   Notch domain  

Schistosoma mansoni has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Smp_105360   0.000000745   365-397   Notch domain  
  0.00000379   327-358   Notch domain  
Smp_116250   0.00000262   2-24   Notch domain  

Mnemiopsis leidyi has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ML128617a-PA   0.000000222   640-671   Notch domain  
  0.00000157   602-633   Notch domain  

Thelohanellus kitauei has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
KII70885   0.00000693   206-237   Notch domain  

Acropora digitifera v1.0 has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
adi_v1.16428   0.00000144   888-916   Notch domain  
  0.0000017   922-954   Notch domain  
  0.0000641   840-872   Notch domain  
 
Weak hits:
adi_v1.07949   0.000126   480-503   Notch domain  
  0.00575   536-559   Notch domain  
adi_v1.17963   0.000111   402-432   Notch domain  
  0.000392   264-287   Notch domain  
  0.00157   225-248   Notch domain  
  0.00196   304-328   Notch domain  
  0.00301   441-463   Notch domain  
  0.00562   124-148   Notch domain  
  0.00706   156-179   Notch domain  
  0.0157   376-398   Notch domain  
  0.0262   191-214   Notch domain  
  0.0445   342-367   Notch domain  

Nematostella vectensis 1.0 has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Nemve1|20239|gw.222.26.1   0.000000085   1012-1039   Notch domain  
  0.00000981   963-995   Notch domain  
  0.0000549   1046-1078   Notch domain  
 
Weak hits:
jgi|Nemve1|10113|gw.217.3.1   0.00103   1397-1426   Notch domain  
jgi|Nemve1|107827|e_gw.88.42.1   0.000366   464-488   Notch domain  
  0.00575   519-543   Notch domain  
jgi|Nemve1|20592|gw.88.43.1   0.000366   457-481   Notch domain  
  0.00575   512-536   Notch domain  

Hydra vulgaris has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|449678154|ref|XP_002164845.2|   0.0000654   434-457   Notch domain  
  0.00929   485-513   Notch domain  
gi|449678443|ref|XP_002155879.2|   0.0000000798   148-176   Notch domain  
  0.00000196   103-134   Notch domain  
  0.000379   185-213   Notch domain  

Amphimedon queenslandica has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Aqu1.224719|PACid:15723247   0.00000235   623-654   Notch domain  
  0.0000628   664-694   Notch domain  
  0.000942   580-610   Notch domain  
 
Weak hits:
Aqu1.223714|PACid:15722242   0.000379   353-376   Notch domain  
  0.00615   406-430   Notch domain  

Proterospongia sp. ATCC 50818 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
PTSG_03468T0   0.00000222   323-355   Notch domain  
 
Weak hits:
PTSG_07206T0   0.000994   663-687   Notch domain  
  0.00301   715-741   Notch domain  

Sphaeroforma arctica JP610 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
SARC_01577T0   0.00000667   2-25   Notch domain  
SARC_07420T0   0.0000981   101-123   Notch domain  
SARC_07652T0   0.0000772   175-201   Notch domain  
  0.000366   134-161   Notch domain  
 
Weak hits:
SARC_01574T0   0.000196   60-93   Notch domain  
SARC_03047T0   0.00222   410-435   Notch domain  
SARC_03273T0   0.000157   145-165   Notch domain  
SARC_04089T0   0.00017   139-166   Notch domain  
  0.00981   103-126   Notch domain  
SARC_06249T0   0.00114   81-104   Notch domain  
SARC_08478T0   0.0562   205-229   Notch domain  
SARC_11362T0   0.000235   248-270   Notch domain  
  0.0327   207-230   Notch domain  
SARC_14496T0   0.000301   204-229   Notch domain  
SARC_15471T0   0.00196   102-126   Notch domain  
SARC_18165T0   0.00314   113-136   Notch domain  

Capsaspora owczarzaki ATCC 30864 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
CAOG_00333T0   0.00000102   220-249   Notch domain  
CAOG_06027T0   0.00000157   291-321   Notch domain  
  0.000119   246-274   Notch domain  
  0.000706   335-366   Notch domain  
  0.0222   423-453   Notch domain  
 
Weak hits:
CAOG_00121T0   0.000693   403-426   Notch domain  
  0.00262   346-369   Notch domain  

Ostreococcus tauri has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Ostta4|11527|fgenesh1_pg.C_Chr_06.0001000302   0.0000432   289-313   Notch domain  

Bathycoccus prasinos has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Bathy15g01500   0.00000523   318-341   Notch domain  
 
Weak hits:
Bathy03g01560   0.00105   322-345   Notch domain  

Thecamonas trahens ATCC 50062 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
AMSG_04448T0   0.0000798   307-331   Notch domain  
  0.00222   370-393   Notch domain  

Cryptosporidium hominis has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Chro.80327   0.000034   280-310   Notch domain  
  0.000157   241-263   Notch domain  
  0.00209   203-230   Notch domain  
  0.00353   113-136   Notch domain  
  0.00379   173-196   Notch domain  
  0.0103   79-102   Notch domain  

Cryptosporidium muris has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gb|CMU_026830   0.0000131   271-301   Notch domain  
  0.000301   78-101   Notch domain  
  0.00034   164-187   Notch domain  
  0.00126   228-255   Notch domain  
  0.0051   197-221   Notch domain  
  0.0131   112-135   Notch domain  

Cryptosporidium parvum Iowa II has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gb|cgd8_2800   0.0000327   280-310   Notch domain  
  0.000157   241-263   Notch domain  
  0.00209   203-230   Notch domain  
  0.00222   173-196   Notch domain  
  0.00353   113-136   Notch domain  
  0.0114   79-102   Notch domain  
 
Weak hits:
gb|cgd5_3420   0.00301   1695-1718   Notch domain  
  0.017   3158-3187   Notch domain  
  0.0235   1535-1562   Notch domain  
  0.0418   107-130   Notch domain  

Neospora caninum has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
psu|NCLIV_014680   0.00000471   293-316   Notch domain  
  0.0000144   182-210   Notch domain  
  0.0000418   400-430   Notch domain  
  0.000562   361-383   Notch domain  
  0.00103   221-243   Notch domain  
  0.00824   327-350   Notch domain  
 
Weak hits:
psu|NCLIV_011720   0.0301   2668-2691   Notch domain  
psu|NCLIV_048990   0.00418   3395-3418   Notch domain  
  0.0105   312-335   Notch domain  
  0.0353   1697-1721   Notch domain  

Toxoplasma gondii VEG has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gb|TGVEG_033070   0.00000458   290-313   Notch domain  
  0.0000235   181-207   Notch domain  
  0.0000418   397-427   Notch domain  
  0.000837   358-380   Notch domain  
  0.00101   218-240   Notch domain  
  0.00876   324-347   Notch domain  
 
Weak hits:
gb|TGVEG_009150   0.00196   2326-2349   Notch domain  
gb|TGVEG_063930   0.00589   3313-3336   Notch domain  
  0.0105   374-397   Notch domain  
  0.0314   1811-1834   Notch domain  

Toxoplasma gondii ME49 has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gb|TGME49_085690   0.00000458   290-313   Notch domain  
  0.0000235   181-207   Notch domain  
  0.0000418   397-427   Notch domain  
  0.000837   358-380   Notch domain  
  0.00101   218-240   Notch domain  
  0.00876   324-347   Notch domain  
 
Weak hits:
gb|TGME49_011270   0.00196   2326-2349   Notch domain  
gb|TGME49_023480   0.00589   3314-3337   Notch domain  
  0.0105   374-397   Notch domain  
  0.0314   1811-1834   Notch domain  

Toxoplasma gondii GT1 has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gb|TGGT1_037090   0.00000458   290-313   Notch domain  
  0.0000235   181-207   Notch domain  
  0.0000418   397-427   Notch domain  
  0.000837   358-380   Notch domain  
  0.00101   218-240   Notch domain  
  0.00876   324-347   Notch domain  
 
Weak hits:
gb|TGGT1_077740   0.00589   3319-3342   Notch domain  
  0.0105   374-397   Notch domain  
  0.0314   1811-1834   Notch domain  

Emiliania huxleyi CCMP1516 has 8 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Emihu1|115902|fgeneshEH_pg.271__19   0.0000602   110-133   Notch domain  
  0.000209   143-167   Notch domain  
jgi|Emihu1|212222|gm1.5100285   0.0000732   314-339   Notch domain  
  0.0000785   281-305   Notch domain  
  0.00262   244-262   Notch domain  
jgi|Emihu1|313149|fgenesh_newKGs_pm.119__12   0.0000497   36-63   Notch domain  
jgi|Emihu1|313515|fgenesh_newKGs_pm.135__4   0.0000497   36-63   Notch domain  
jgi|Emihu1|449018|estExtDG_Genemark1.C_120329   0.0000929   458-487   Notch domain  
  0.0000942   294-318   Notch domain  
  0.000641   254-276   Notch domain  
jgi|Emihu1|463751|estExtDG_fgeneshEH_pg.C_320079   0.0000706   197-220   Notch domain  
 
Weak hits:
jgi|Emihu1|111108|fgeneshEH_pg.145__8   0.00366   76-100   Notch domain  
jgi|Emihu1|195080|gm1.300131   0.00034   91-115   Notch domain  
jgi|Emihu1|200283|gm1.1100455   0.00209   398-421   Notch domain  
  0.012   353-378   Notch domain  
  0.0222   436-459   Notch domain  
jgi|Emihu1|222818|gm1.10500094   0.000327   350-376   Notch domain  
  0.00314   396-420   Notch domain  
  0.00405   435-458   Notch domain  
jgi|Emihu1|228440|gm1.14700095   0.000107   281-305   Notch domain  
  0.00353   244-262   Notch domain  
jgi|Emihu1|231980|gm1.17700055   0.00209   355-378   Notch domain  
  0.0131   399-422   Notch domain  
jgi|Emihu1|247657|gm1.59500012   0.00405   353-378   Notch domain  
jgi|Emihu1|254015|gm1.203600001   0.000615   50-74   Notch domain  
jgi|Emihu1|431789|estExtDG_fgenesh_newKGs_kg.C_10169   0.0144   45-65   Notch domain  
jgi|Emihu1|464775|estExtDG_fgeneshEH_pg.C_560059   0.00235   746-770   Notch domain  

Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) has 14 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118764069|gb|AAI28630|   0.0000785   449-472   Notch domain  
  0.00889   509-536   Notch domain  
gi|124481570|gb|AAI33054|   0.000000157   1527-1559   Notch domain  
  0.000000196   1487-1520   Notch domain  
  0.000000405   1446-1478   Notch domain  
gi|148227584|ref|NP_001090704|   0.0000785   449-472   Notch domain  
  0.00889   509-536   Notch domain  
gi|148236851|ref|NP_001090757|   0.000000157   1527-1559   Notch domain  
  0.000000196   1487-1520   Notch domain  
  0.000000405   1446-1478   Notch domain  
gi|301619452|gb|XP_002939126|   0.000000222   1563-1595   Notch domain  
  0.000000314   1485-1516   Notch domain  
  0.000497   1526-1557   Notch domain  
gi|301624477|gb|XP_002941531|   0.000000105   1506-1539   Notch domain  
  0.00000124   1427-1458   Notch domain  
  0.0000183   1467-1498   Notch domain  
gi|301626947|gb|XP_002942647|   0.000000157   1271-1302   Notch domain  
 
Weak hits:
gi|301611465|gb|XP_002935250|   0.0275   1553-1583   Notch domain  

Drosophila melanogaster FlyBase 5.12 (FlyBase) has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
FBpp0070483   0.00000034   1561-1593   Notch domain  
  0.00000144   1521-1553   Notch domain  
  0.00000301   1481-1513   Notch domain  
FBpp0087690   0.0000824   214-240   Notch domain  

Anopheles gambiae VectorBase AgamP3.6 (VectorBase) has 3 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
AGAP001015-PA|hypothetical   0.000000131   1540-1573   Notch domain  
  0.000000157   1580-1613   Notch domain  
  0.00000157   1500-1532   Notch domain  
 
Weak hits:
AGAP012336-PA|hypothetical   0.00144   209-233   Notch domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   10160 10160
No Yes Homo sapiens 76_38 Human 24 12
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 9 4
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 10
No Yes Pongo abelii 76_2 Sumatran orangutan 6 3
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 13 6
No Yes Papio anubis 76 Olive baboon 11 5
No Yes Macaca mulatta 76_1 Rhesus monkey 16 8
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 21 10
No Yes Otolemur garnettii 76_3 Small-eared galago 11 5
No Yes Microcebus murinus 76_1 Gray mouse lemur 5 3
No Yes Rattus norvegicus 76_5.0 Norway rat 12 6
No Yes Mus musculus 76_38 House mouse 11 5
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 6 3
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 11 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 11 5
No Yes Cavia porcellus 76_3 Domestic guinea pig 11 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 8 4
No Yes Ochotona princeps 76 American pika 10 5
No Yes Tupaia belangeri 76 Northern tree shrew 5 3
No Yes Sus scrofa 76_10.2 Pig 8 5
No Yes Bos taurus 76_3.1 Cattle 11 5
No Yes Ovis aries 76_3.1 Sheep 7 4
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 9 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 11 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 10 5
No Yes Canis familiaris 76_3.1 Dog 19 9
No Yes Felis catus 76_6.2 Domestic cat 9 5
No Yes Equus caballus 76_2 Horse 16 8
No Yes Myotis lucifugus 76_2.0 Little brown bat 5 3
No Yes Pteropus vampyrus 76_1 Large flying fox 11 5
No Yes Sorex araneus 76_1 European shrew 5 3
No Yes Erinaceus europaeus 76 Western European hedgehog 4 3
No Yes Procavia capensis 76_1 Cape rock hyrax 8 3
No Yes Loxodonta africana 76_3 African savanna elephant 12 6
No Yes Echinops telfairi 76 Small Madagascar hedgehog 5 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 6 3
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 11 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 12 6
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 11 5
No Yes Ornithorhynchus anatinus 76_5 Platypus 9 4
No Yes Saccoglossus kowalevskii v3.0   6 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 2 1
No Yes Meleagris gallopavo 76_2 Turkey 6 3
No Yes Gallus gallus 76_4 Chicken 6 3
No Yes Anas platyrhynchos 76_1.0 Mallard 6 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 7 4
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 6 3
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 5 3
No Yes Anolis carolinensis 76_2.0 Green anole 8 4
No Yes Xenopus laevis African clawed frog 9 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 16 9
No Yes Latimeria chalumnae 76_1 Coelacanth 16 6
No Yes Lepisosteus oculatus 76 Spotted gar 12 4
No Yes Gadus morhua 76_1 Atlantic cod 31 12
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 27 10
No Yes Takifugu rubripes 76_4 Torafugu 68 24
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 15 6
No Yes Oryzias latipes 76_1 Japanese medaka 13 5
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 15 6
No Yes Poecilia formosa 76 Amazon molly 17 7
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 21 8
No Yes Astyanax mexicanus 76 Mexican tetra 14 6
No Yes Danio rerio 76_9 Zebrafish 24 10
No Yes Oikopleura dioica   2 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 25 10
No Yes Ciona intestinalis 76 Vase tunicate 3 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 4 2
No Yes Adineta vaga   2 1
No Yes Octopus bimaculoides 280   4 2
No Yes Crassostrea gigas 22 Pacific oyster 5 3
No Yes Lottia gigantea Owl limpet 2 1
No Yes Helobdella robusta   5 3
No Yes Capitella sp. I   6 3
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 1
No Yes Heliconius melpomene Postman butterfly 3 1
No Yes Bombyx mori Domestic silkworm 2 1
No Yes Nasonia vitripennis Jewel wasp 3 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 15 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 3 1
No Yes Linepithema humile v1.1 Argentine ant 2 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 4 2
No Yes Atta cephalotes v1.1   4 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   3 1
No Yes Drosophila willistoni 1.3   4 2
No Yes Drosophila pseudoobscura 2.13   3 1
No Yes Drosophila persimilis 1.3   3 1
No Yes Drosophila suzukii   3 1
No Yes Drosophila yakuba 1.3   3 1
No Yes Drosophila sechellia 1.3   3 1
No Yes Drosophila melanogaster 76_5 Fruit fly 7 3
No Yes Drosophila erecta 1.3   3 1
No Yes Drosophila ananassae 1.3   3 1
No Yes Drosophila virilis 1.2   3 1
No Yes Drosophila mojavensis 1.3   3 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 1
No Yes Anopheles darlingi 22 American malaria mosquito 3 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 1
No Yes Tribolium castaneum 3.0 Red flour beetle 3 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 4 2
No Yes Acyrthosiphon pisum Pea aphid 3 1
No Yes Rhodnius prolixus 22   3 1
No Yes Daphnia pulex Common water flea 6 2
No Yes Strigamia maritima 22   3 1
No Yes Sarcoptes scabiei   2 1
No Yes Tetranychus urticae Two-spotted spider mite 4 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 2
No Yes Pristionchus pacificus   12 8
No Yes Meloidogyne incognita Southern root-knot nematode 3 1
No Yes Onchocerca volvulus 22   7 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 17 6
No Yes Caenorhabditis japonica   3 1
No Yes Caenorhabditis brenneri   8 3
No Yes Caenorhabditis remanei   6 2
No Yes Caenorhabditis elegans 76_235 Roundworm 6 2
No Yes Caenorhabditis briggsae 2   12 4
No Yes Trichinella spiralis 22   3 1
No Yes Hymenolepis microstoma   3 2
No Yes Echinococcus multilocularis   4 2
No Yes Echinococcus granulosus   4 2
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   3 2
No Yes Mnemiopsis leidyi Sea walnut 2 1
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   3 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 1
No Yes Hydra vulgaris   3 2
No Yes Amphimedon queenslandica   2 1
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Sphaeroforma arctica JP610   3 3
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   3 1
No Yes Toxoplasma gondii VEG   3 1
No Yes Toxoplasma gondii ME49   3 1
No Yes Toxoplasma gondii GT1   3 1
No Yes Emiliania huxleyi CCMP1516   8 6
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 14 7
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 4 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 8 3
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 6 2
No Yes Neospora caninum Nc-Liverpool 6.2   3 1
No Yes Homo sapiens 75_37 (old version GRC) Human 24 12
No Yes Homo sapiens (NCBI version) Human 11 5
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 11 5
No Yes Loa loa v3.3 (Request) Eye worm 8 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 7 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 8 3
No Yes Homo sapiens 69_37 Human 25 12
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 9 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 11 5
No Yes Pongo abelii 69_2 Sumatran orangutan 6 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 8 4
No Yes Macaca mulatta 69_1 Rhesus monkey 9 5
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 11 5
No Yes Otolemur garnettii 69_3 Small-eared galago 11 5
No Yes Microcebus murinus 69_1 Gray mouse lemur 5 3
No Yes Rattus norvegicus 69_3.4 Norway rat 11 5
No Yes Mus musculus 69_38 House mouse 11 5
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 6 3
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 11 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 11 5
No Yes Oryctolagus cuniculus 69_2 Rabbit 7 3
No Yes Ochotona princeps 69 American pika 10 5
No Yes Tupaia belangeri 69 Northern tree shrew 5 3
No Yes Sus scrofa 69_10.2 Pig 5 3
No Yes Bos taurus 69_3.1 Cattle 11 5
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 9 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 11 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 10 5
No Yes Canis familiaris 69_3.1 Dog 11 5
No Yes Felis catus 69 Domestic cat 6 4
No Yes Equus caballus 69_2 Horse 8 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 5 3
No Yes Pteropus vampyrus 69_1 Large flying fox 11 5
No Yes Sorex araneus 69_1 European shrew 5 3
No Yes Erinaceus europaeus 69 Western European hedgehog 4 3
No Yes Procavia capensis 69_1 Cape rock hyrax 8 3
No Yes Loxodonta africana 69_3 African savanna elephant 6 3
No Yes Echinops telfairi 69 Small Madagascar hedgehog 5 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 3 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 11 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 8 4
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 11 5
No Yes Ornithorhynchus anatinus 69_5 Platypus 9 4
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 1
No Yes Meleagris gallopavo 69_2 Turkey 6 3
No Yes Gallus gallus 69_2 Chicken 6 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 7 4
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 5 3
No Yes Anolis carolinensis 69_2.0 Green anole 8 4
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 10 5
No Yes Latimeria chalumnae 69_1 Coelacanth 13 5
No Yes Gadus morhua 69_1 Atlantic cod 13 6
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 15 6
No Yes Takifugu rubripes 69_4 Torafugu 13 5
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 15 6
No Yes Oryzias latipes 69_1 Japanese medaka 13 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 15 6
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 15 6
No Yes Danio rerio 69_9 Zebrafish 15 6
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 1
No Yes Ciona intestinalis 69 Vase tunicate 3 1
No Yes Drosophila melanogaster 69_5 Fruit fly 4 2
No Yes Caenorhabditis elegans 69_215 Roundworm 6 2
No Yes NCBI 2017_08 genome   3791 1763
No Yes Protozoadb 2010_08 (Protozoadb)   11 7
No Yes STRING v9.0.5 (STRING)   349 155
No Yes Uniprot 2018_03 genome   3287 1477
No Yes Global Ocean Sampling Expedition (GOS)   7 6
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   40 14
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   41 41
No Yes TargetDB (Targets)   11 5

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