SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Sus scrofa 76_10.2 > TSP-1 type 1 repeat > View all domain architectures

TSP-1 type 1 repeat superfamily assignments to Sus scrofa 76_10.2

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.


ENSSSCP00000018112

ENSSSCP00000029807

ENSSSCP00000005158

ENSSSCP00000030724

ENSSSCP00000022091

ENSSSCP00000004335

ENSSSCP00000012808

ENSSSCP00000018126

ENSSSCP00000016173

ENSSSCP00000021077

ENSSSCP00000012644

ENSSSCP00000024720

ENSSSCP00000006778

ENSSSCP00000014938

ENSSSCP00000010951

ENSSSCP00000010956

ENSSSCP00000017814

ENSSSCP00000026540

ENSSSCP00000016776

ENSSSCP00000001925

ENSSSCP00000004611

ENSSSCP00000003908

ENSSSCP00000016174

ENSSSCP00000012809

ENSSSCP00000022151

ENSSSCP00000022222

ENSSSCP00000012250

ENSSSCP00000017951

ENSSSCP00000014235

ENSSSCP00000002540

ENSSSCP00000000844

ENSSSCP00000020719

ENSSSCP00000020623

ENSSSCP00000016278

ENSSSCP00000021031

ENSSSCP00000000845

ENSSSCP00000029588

ENSSSCP00000014814

ENSSSCP00000022250

ENSSSCP00000030234

ENSSSCP00000005355

ENSSSCP00000013067

ENSSSCP00000022049

ENSSSCP00000014282

ENSSSCP00000005356

ENSSSCP00000021587

ENSSSCP00000004152

ENSSSCP00000001960

ENSSSCP00000009546

ENSSSCP00000017865

ENSSSCP00000010006

ENSSSCP00000017868

ENSSSCP00000005303

ENSSSCP00000007092

ENSSSCP00000001961

ENSSSCP00000015169

ENSSSCP00000009547

ENSSSCP00000004554

ENSSSCP00000007949

ENSSSCP00000026630

ENSSSCP00000006594

ENSSSCP00000030179

ENSSSCP00000002607

ENSSSCP00000027004

ENSSSCP00000007535

ENSSSCP00000027542

ENSSSCP00000004525

ENSSSCP00000006356

ENSSSCP00000006447

ENSSSCP00000007401

ENSSSCP00000017860

ENSSSCP00000004150

ENSSSCP00000004772

ENSSSCP00000006411

ENSSSCP00000030721

ENSSSCP00000007862



Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.