SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Type I dockerin domain superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Methanocella conradii HZ254


gi|383320075|ref|YP_005380916.1|


Methanosaeta harundinacea 6Ac


gi|386001729|ref|YP_005920028.1|


Methanosaeta thermophila PT


gi|116754280|ref|YP_843398.1|

gi|116754887|ref|YP_844005.1|

gi|116754886|ref|YP_844004.1|


Methanosaeta concilii GP6


gi|330508044|ref|YP_004384472.1|

gi|330508043|ref|YP_004384471.1|

gi|330509003|ref|YP_004385431.1|

gi|330508045|ref|YP_004384473.1|

gi|330508066|ref|YP_004384494.1|

gi|330507646|ref|YP_004384074.1|

gi|330508071|ref|YP_004384499.1|

gi|330506940|ref|YP_004383368.1|


Methanococcoides burtonii DSM 6242


gi|91772751|ref|YP_565443.1|


Methanosarcina acetivorans C2A


gi|20093096|ref|NP_619171.1|

gi|20090700|ref|NP_616775.1|

gi|20090369|ref|NP_616444.1|


Methanosarcina mazei Go1


gi|21228200|ref|NP_634122.1|


Methanosphaerula palustris E1-9c


gi|219852796|ref|YP_002467228.1|

gi|219852940|ref|YP_002467372.1|

gi|219853189|ref|YP_002467621.1|

gi|219851070|ref|YP_002465502.1|

gi|219851493|ref|YP_002465925.1|

gi|219851088|ref|YP_002465520.1|

gi|219853226|ref|YP_002467658.1|

gi|219851157|ref|YP_002465589.1|

gi|219852663|ref|YP_002467095.1|

gi|219852393|ref|YP_002466825.1|

gi|219852362|ref|YP_002466794.1|

gi|219851541|ref|YP_002465973.1|

gi|219853190|ref|YP_002467622.1|

gi|219851969|ref|YP_002466401.1|

gi|219851391|ref|YP_002465823.1|

gi|219853178|ref|YP_002467610.1|

gi|219853304|ref|YP_002467736.1|

gi|219851898|ref|YP_002466330.1|

gi|219851392|ref|YP_002465824.1|

gi|219852941|ref|YP_002467373.1|

gi|219852409|ref|YP_002466841.1|

gi|219852082|ref|YP_002466514.1|

gi|219852392|ref|YP_002466824.1|

gi|219852087|ref|YP_002466519.1|

gi|219851510|ref|YP_002465942.1|

gi|219851095|ref|YP_002465527.1|

gi|219852010|ref|YP_002466442.1|

gi|219852869|ref|YP_002467301.1|

gi|219852059|ref|YP_002466491.1|

gi|219851966|ref|YP_002466398.1|

gi|219852430|ref|YP_002466862.1|

gi|219852016|ref|YP_002466448.1|

gi|219851646|ref|YP_002466078.1|

gi|219851069|ref|YP_002465501.1|

gi|219851647|ref|YP_002466079.1|

gi|219852857|ref|YP_002467289.1|


Methanospirillum hungatei JF-1


gi|88601500|ref|YP_501678.1|

gi|88601945|ref|YP_502123.1|

gi|88602185|ref|YP_502363.1|

gi|88604274|ref|YP_504452.1|


Methanoplanus petrolearius DSM 11571


gi|307353096|ref|YP_003894147.1|


Methanoculleus bourgensis MS2


gi|397781310|ref|YP_006545783.1|

gi|397780950|ref|YP_006545423.1|

gi|397781302|ref|YP_006545775.1|

gi|397781304|ref|YP_006545777.1|

gi|397781306|ref|YP_006545779.1|

gi|397781308|ref|YP_006545781.1|

gi|397781307|ref|YP_006545780.1|

gi|397781305|ref|YP_006545778.1|


Methanoculleus marisnigri JR1


gi|126178623|ref|YP_001046588.1|


Archaeoglobus fulgidus DSM 4304


gi|11499952|ref|NP_071198.1|


Pyrococcus abyssi GE5


gi|14521248|ref|NP_126723.1|


Pyrococcus furiosus COM1


gi|397651510|ref|YP_006492091.1|


Thermoplasmatales archaeon BRNA1


gi|474934741|ref|YP_007688323.1|

gi|474934466|ref|YP_007688048.1|


Halopiger xanaduensis SH-6


gi|336253309|ref|YP_004596416.1|


Haloterrigena turkmenica DSM 5511


gi|284163918|ref|YP_003402197.1|

gi|284163917|ref|YP_003402196.1|


Natrialba magadii ATCC 43099


gi|289582127|ref|YP_003480593.1|

gi|289583606|ref|YP_003482016.1|


Halogeometricum borinquense DSM 11551


gi|313117346|ref|YP_004044329.1|

gi|313116868|ref|YP_004037992.1|


Haloferax mediterranei ATCC 33500


gi|389847569|ref|YP_006349808.1|

gi|389847562|ref|YP_006349801.1|


Halomicrobium mukohataei DSM 12286


gi|257386761|ref|YP_003176534.1|


Halorhabdus utahensis DSM 12940


gi|257052071|ref|YP_003129904.1|

gi|257053489|ref|YP_003131322.1|

gi|257052933|ref|YP_003130766.1|


Haloarcula hispanica ATCC 33960


gi|344209742|ref|YP_004785919.1|

gi|344211693|ref|YP_004796013.1|


Haloarcula marismortui ATCC 43049


gi|55380211|ref|YP_138060.1|

gi|55379051|ref|YP_136901.1|

gi|55377611|ref|YP_135461.1|

gi|55377185|ref|YP_135035.1|