SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

SIS domain superfamily assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Ostreococcus lucimarinus CCE9901


jgi|Ost9901_3|17428|fgenesh1_pg.C_Chr_11000230

jgi|Ost9901_3|31870|eugene.0500010407


Ostreococcus tauri


jgi|Ostta4|35648|1100010298

jgi|Ostta4|33049|0500010414


Bathycoccus prasinos


Bathy13g00670

Bathy03g04790

Bathy08g02240

Bathy02g02830


Micromonas sp. RCC299


jgi|MicpuN2|104983|estExt_fgenesh2_kg.C_Chr_120024

jgi|MicpuN2|93714|estExt_Genewise2Plus.C_Chr_030558


Micromonas pusilla CCMP1545 v3.0


jgi|MicpuC3|172307|estExt_Genewise1.C_10_t20313

jgi|MicpuC3|25777|MicpuC2.estExt_Genewise1.C_30648


Cyanidioschyzon merolae strain 10D 22


CMT497CT

CMO124CT

CMK166CT

CMV062CT


Cyanidioschyzon merolae


gnl|CMER|CMT497C

gnl|CMER|CMO124C

gnl|CMER|CMK166C

gnl|CMER|CMV062C


Porphyridium purpureum 02_2012


evm.model.contig_2062.10

evm.model.contig_3437.2

evm.model.contig_2020.16


Thecamonas trahens ATCC 50062


AMSG_00534T0

AMSG_04745T0

AMSG_10187T0

AMSG_08791T0


Bigelowiella natans CCMP2755 22


JGI_V11_57484

JGI_V11_44429

JGI_V11_58608

JGI_V11_125519

JGI_V11_92052


Giardia lamblia 2.3


gb|GLP15_4116


Cyanophora paradoxa


ConsensusfromContig25643-maker-ConsensusfromContig25643-snap-gene-0.0-mRNA-1:cds:5701/7-187:0:-

ConsensusfromContig54409-snap_masked-ConsensusfromContig54409-abinit-gene-0.2-mRNA-1:cds:11236/4-226

ConsensusfromContig10074-snap_masked-ConsensusfromContig10074-abinit-gene-0.1-mRNA-1:cds:3398/40-282

ConsensusfromContig55253-snap_masked-ConsensusfromContig55253-abinit-gene-0.0-mRNA-1:cds:11354/1148-

ConsensusfromContig12127-snap_masked-ConsensusfromContig12127-abinit-gene-0.0-mRNA-1:cds:4335/12-17:

ConsensusfromContig12127-snap_masked-ConsensusfromContig12127-abinit-gene-0.1-mRNA-1:cds:4341/953-11


Leishmania mexicana 2.4


psu|LmxM12.0530

psu|LmxM06.0950


Leishmania major strain Friedlin


psu|LmjF12.0530

psu|LmjF06.0950


Leishmania infantum JPCM5 2.4


psu|LinJ12_V3.0490

psu|LinJ06_V3.0980


Leishmania braziliensis MHOM/BR/75/M2904 2.4


psu|LbrM12_V2.0490

psu|LbrM06_V2.0930


Trypanosoma vivax


psu|TvY486_0101660

psu|TvY486_0705620


Trypanosoma cruzi strain CL Brener


psu|Tc00.1047053506529.508


Trypanosoma congolense 2.4


psu|TcIL3000.0.29570

psu|TcIL3000.7.4570


Trypanosoma brucei gambiense v4.1


Tbg972.1.2390

Tbg972.7.6450


Trypanosoma brucei TREU927 v4.1


Tb927.1.3830

Tb927.7.5560


Ectocarpus siliculosus


Esi0060_0128

Esi0626_0005

Esi0202_0044

Esi0065_0090

Esi0266_0033


Aureococcus anophagefferens


jgi|Auran1|69676

jgi|Auran1|69855

jgi|Auran1|28862

jgi|Auran1|52281

jgi|Auran1|63462


Albugo laibachii 22


CCA13931

CCA19089


Pythium iwayamai DAOM BR242034 22


EPrPW00000019987

EPrPW00000021035

EPrPW00000018250