SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

SMI1/KNR4-like family assignments to selected genomes

Click on the pictures below to see domain assignment details for that sequence.

The key to the domain colours is at the bottom of the page.




Clostridium clariflavum DSM 19732


gi|374296973|ref|YP_005047164.1|


Listeria innocua Clip11262


gi|16801977|ref|NP_472245.1|


Bacillus sp. JS


gi|386758482|ref|YP_006231698.1|

gi|386757116|ref|YP_006230332.1|


Bacillus amyloliquefaciens FZB42


gi|154686314|ref|YP_001421475.1|


Bacillus atrophaeus 1942


gi|311068277|ref|YP_003973200.1|


Bacillus subtilis subsp. subtilis str. 168


gi|16078959|ref|NP_389780.1|


Saccharophagus degradans 2-40


gi|90021200|ref|YP_527027.1|


Cellvibrio japonicus Ueda107


gi|192360709|ref|YP_001983341.1|


Shewanella piezotolerans WP3


gi|212636607|ref|YP_002313132.1|


Shewanella loihica PV-4


gi|127513899|ref|YP_001095096.1|


Shewanella halifaxensis HAW-EB4


gi|167625172|ref|YP_001675466.1|


Shewanella sediminis HAW-EB3


gi|157376643|ref|YP_001475243.1|


Shewanella denitrificans OS217


gi|91792103|ref|YP_561754.1|


Shewanella pealeana ATCC 700345


gi|157962996|ref|YP_001503030.1|


Shewanella oneidensis MR-1


gi|24375336|ref|NP_719379.1|


Shewanella baltica OS185


gi|153002134|ref|YP_001367815.1|


Shewanella woodyi ATCC 51908


gi|170725272|ref|YP_001759298.1|


Shewanella sp. MR-4


gi|113971515|ref|YP_735308.1|


Shewanella amazonensis SB2B


gi|119775748|ref|YP_928488.1|


Shewanella violacea DSS12


gi|294142205|ref|YP_003558183.1|


Shewanella frigidimarina NCIMB 400


gi|114562018|ref|YP_749531.1|


Shewanella putrefaciens CN-32


gi|146291894|ref|YP_001182318.1|


Alcanivorax borkumensis SK2


gi|110834596|ref|YP_693455.1|


Photorhabdus luminescens subsp. laumondii TTO1


gi|37524355|ref|NP_927699.1|


Pectobacterium wasabiae WPP163


gi|261823501|ref|YP_003261607.1|

gi|261823512|ref|YP_003261618.1|