SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

NAD kinase/diacylglycerol kinase-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 5 SUPERFAMILY models representing the NAD kinase/diacylglycerol kinase-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0044184 354 2005-09-08 d1u0ta_ NAD kinase-like
0043771 353 2005-09-08 d1suwa_ NAD kinase-like
0053755 2071 2010-05-31 d2bona1 Diacylglycerol kinase-like
0054632 2331 2010-05-31 d2qv7a1 Diacylglycerol kinase-like
0054453 2045 2010-05-31 d2p1ra1 Diacylglycerol kinase-like