SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Methylated DNA-protein cysteine methyltransferase, C-terminal domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 3 SUPERFAMILY models representing the Methylated DNA-protein cysteine methyltransferase, C-terminal domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0048993 1626 2008-09-10 d1qnta1 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
0048152 1643 2008-09-10 d1mgta1 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
0049380 902 2008-09-10 d1sfea1 Methylated DNA-protein cysteine methyltransferase, C-terminal domain