SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

DBL homology domain (DH-domain) superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 10 SUPERFAMILY models representing the DBL homology domain (DH-domain) superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0036335 444 2005-09-08 d1dbha1 DBL homology domain (DH-domain)
0053817 2738 2010-05-31 d2dfka1 DBL homology domain (DH-domain)
0044151 938 2005-09-08 d1txda1 DBL homology domain (DH-domain)
0037708 1021 2005-09-08 d1foea1 DBL homology domain (DH-domain)
0035771 919 2005-09-08 d1by1a_ DBL homology domain (DH-domain)
0050917 2647 2008-09-10 d1xcga1 DBL homology domain (DH-domain)
0041563 763 2005-09-08 d1ntya1 DBL homology domain (DH-domain)
0037403 1000 2005-09-08 d1f5xa_ DBL homology domain (DH-domain)
0047812 2834 2008-09-10 d1ki1b1 DBL homology domain (DH-domain)
0040329 989 2005-09-08 d1kz7a1 DBL homology domain (DH-domain)