SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Tetracyclin repressor-like, C-terminal domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 34 SUPERFAMILY models representing the Tetracyclin repressor-like, C-terminal domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0050189 849 2008-09-10 d1vi0a2 Tetracyclin repressor-like, C-terminal domain
0052799 107 2008-09-10 d2fx0a2 Tetracyclin repressor-like, C-terminal domain
0053097 244 2008-09-10 d2id3a2 Tetracyclin repressor-like, C-terminal domain
0054375 380 2010-05-31 d2oi8a2 Tetracyclin repressor-like, C-terminal domain
0043601 105 2005-09-08 d1sgma2 Tetracyclin repressor-like, C-terminal domain
0049546 85 2008-09-10 d1t56a2 Tetracyclin repressor-like, C-terminal domain
0052648 167 2008-09-10 d2fbqa2 Tetracyclin repressor-like, C-terminal domain
0052878 76 2008-09-10 d2gena2 Tetracyclin repressor-like, C-terminal domain
0054073 567 2010-05-31 d2hyja2 Tetracyclin repressor-like, C-terminal domain
0051515 47 2008-09-10 d1z77a2 Tetracyclin repressor-like, C-terminal domain
0052844 258 2008-09-10 d2g7ga2 Tetracyclin repressor-like, C-terminal domain
0053205 86 2008-09-10 d2np5a2 Tetracyclin repressor-like, C-terminal domain
0047678 35 2008-09-10 d1jt6a2 Tetracyclin repressor-like, C-terminal domain
0050080 49 2008-09-10 d1v7ba2 Tetracyclin repressor-like, C-terminal domain
0052743 454 2008-09-10 d2fq4a2 Tetracyclin repressor-like, C-terminal domain
0053066 348 2008-09-10 d2i10a2 Tetracyclin repressor-like, C-terminal domain
0054342 71 2010-05-31 d2o7ta2 Tetracyclin repressor-like, C-terminal domain
0049196 249 2008-09-10 d1rkta2 Tetracyclin repressor-like, C-terminal domain
0052394 115 2008-09-10 d2d6ya2 Tetracyclin repressor-like, C-terminal domain
0052849 306 2008-09-10 d2g7sa2 Tetracyclin repressor-like, C-terminal domain
0054049 7 2010-05-31 d2hkua2 Tetracyclin repressor-like, C-terminal domain
0051467 87 2008-09-10 d1z0xa2 Tetracyclin repressor-like, C-terminal domain
0052831 578 2008-09-10 d2g3ba2 Tetracyclin repressor-like, C-terminal domain
0053203 89 2008-09-10 d2np3a2 Tetracyclin repressor-like, C-terminal domain
0054861 41 2010-05-31 d3c07a2 Tetracyclin repressor-like, C-terminal domain
0043843 26 2005-09-08 d1t33a2 Tetracyclin repressor-like, C-terminal domain
0049911 111 2008-09-10 d1ui5a2 Tetracyclin repressor-like, C-terminal domain
0052656 325 2008-09-10 d2fd5a2 Tetracyclin repressor-like, C-terminal domain
0052886 407 2008-09-10 d2gfna2 Tetracyclin repressor-like, C-terminal domain
0054158 2 2010-05-31 d2iu5a2 Tetracyclin repressor-like, C-terminal domain
0051586 247 2008-09-10 d1zk8a2 Tetracyclin repressor-like, C-terminal domain
0052846 192 2008-09-10 d2g7la2 Tetracyclin repressor-like, C-terminal domain
0053236 186 2008-09-10 d2o7oa2 Tetracyclin repressor-like, C-terminal domain
0048726 290 2008-09-10 d1pb6a2 Tetracyclin repressor-like, C-terminal domain