SUPERFAMILY 1.75 HMM library and genome assignments server

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beta-Galactosidase/glucuronidase domain superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 11 SUPERFAMILY models representing the beta-Galactosidase/glucuronidase domain superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0045963 548 2008-09-10 d1bhga1 beta-Galactosidase/glucuronidase domain
0054736 459 2010-05-31 d2vzsa1 beta-Galactosidase/glucuronidase domain
0054215 411 2010-05-31 d2je8a1 beta-Galactosidase/glucuronidase domain
0046375 409 2008-09-10 d1dp0a2 beta-Galactosidase/glucuronidase domain
0054738 88 2010-05-31 d2vzsa3 beta-Galactosidase/glucuronidase domain
0054217 55 2010-05-31 d2je8a3 beta-Galactosidase/glucuronidase domain
0051367 364 2008-09-10 d1yq2a2 beta-Galactosidase/glucuronidase domain
0046374 810 2008-09-10 d1dp0a1 beta-Galactosidase/glucuronidase domain
0054737 92 2010-05-31 d2vzsa2 beta-Galactosidase/glucuronidase domain
0054216 187 2010-05-31 d2je8a2 beta-Galactosidase/glucuronidase domain
0051366 302 2008-09-10 d1yq2a1 beta-Galactosidase/glucuronidase domain