SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

alpha-D-mannose-specific plant lectins superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.


All 11 SUPERFAMILY models representing the alpha-D-mannose-specific plant lectins superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0035319 315 2005-09-08 d1b2pa_ alpha-D-mannose-specific plant lectins
0041508 378 2005-09-08 d1npla_ alpha-D-mannose-specific plant lectins
0039687 412 2005-09-08 d1jpca_ alpha-D-mannose-specific plant lectins
0035745 450 2005-09-08 d1bwud_ alpha-D-mannose-specific plant lectins
0050925 1040 2008-09-10 d1xd6a_ alpha-D-mannose-specific plant lectins
0040112 451 2005-09-08 d1kj1d_ alpha-D-mannose-specific plant lectins
0036491 287 2005-09-08 d1dlpa2 alpha-D-mannose-specific plant lectins
0035744 427 2005-09-08 d1bwua_ alpha-D-mannose-specific plant lectins
0050924 1188 2008-09-10 d1xd5a_ alpha-D-mannose-specific plant lectins
0040111 431 2005-09-08 d1kj1a_ alpha-D-mannose-specific plant lectins
0036490 257 2005-09-08 d1dlpa1 alpha-D-mannose-specific plant lectins